TCONS_00021725 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021725
Unique NameTCONS_00021725
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2161

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021725 ID=TCONS_00021725|Name=TCONS_00021725|organism=Clytia hemisphaerica|type=transcript|length=2161bp
CACGGGACgctcaaaattgaaaatcgatacaaattaattttcaaaataca
gTTCATACTTCATTGTGTTACCAAGGTGACCAATAATATCCAATTGAAAT
CTCTTTAATATCCCATTTATTGAAAactgatttgaaaaaaatatatatgt
tttttttcgacacggaattattttttttggtacttttttatcattctaAG
GATGCAGGATAGATATACGATAATgtttattttgaagaaatattttattg
ttattttgctTCTTGAAAGCAAAACTTTTGGTGTTCGTGCACATCAGCAT
GATTATAAGTATGATCGAACCTATCGAGATAAGCGATCAACATTGCATAC
AtatttaaagttgaaaaatttaaatgaacTTGGGTGCATTTTGGCTTGTT
CGAATGACTTTGAATGTGGCTCAATTAACTATAATAAAGAATTAAAGTTC
TGTGAGCTGAACGAAATTCAAAAAGATAACGACCAGCATACTGAATTATT
GAAGATCGATAAAGGATGGAATCATTTTATTAAACGCAAGTCAAGTCCTG
CTATCACTCCAGTTTCCCAAGAATTCTCCATTCCAGGGGAAATCGTTCCA
GAACGGAATAAACTTGTTCACATCATTCCTACACAAGAGAAAACATGGGA
GCTGtcttttgaattcaaaatcCTCCAAAAGCAAGATGGAGTAACCAGCT
TGATACGTTTAATGGATGAGAACTGTAAAACAGACCATCAGCAGATAGGT
TGTAGAACTCCAGCAATCTTTCTTGCATCAGATCGACTTCACATCACCTT
TTCAAGCGATATAAACCCTAACCAAAATATTAATACGGGTAGCTTTGCAC
TGAATCAAAAACATAAATTCAAAATGAGACGTGGAGTTAACAGTTGTAAA
ACTCCTTCCAAGCAATACACATCAATATATATAAATGACGTACTGCTAGA
GGAGTTTGAGCACCATGGAATACAACCTACCTCAACTAATGTTCAAGTTT
ATGTTGCAGATGGTTATTGGCCAAAAGCACCGGCAGTTATCTTTGATCTT
AAATATACTCACGATGCTCTATACCCAGGGAATCTATTTGAATTGCGCTC
GGGACGATGTTTGGCGTATTACGAACAATGGCCACCGTCTGATAGTTGGT
TCGTCTCGTTTGATTATATGATCACTTCAGCTGTGCCAATCGGCTACCGT
CGAATGATACAATTCAAAGAAATCGGTTCAGCGCGAGGCCAAATTGGATA
TTGGTTTCCTTTTTTAGAACGTGTTAGAAATAGTATGCGATTCAAAACAG
CATATTGGATAAACGGTCAGGTTAGTTCTGTATGCGCCAATCAAGATTTA
ACTCCCTTTGTTGGGCGTTTTGTTCCGATACGGATTGAACAGATAAAACA
ATCGGATGGTAGAACCTTCATGTCTTTATACGTTGACGGTAACAAGATCT
GTACCACAGAAAATACTACCCCAGAAACTGTTGGTCCTACTGAGTTCATT
ATTGCAGGATATTTCGATGACGAACCTAGGATCGTTTTTAGAGACATTAA
AGTGGAATCAATATAATGATGGTTATTGAGTAAAAAGATGGTTAGGTTTG
GAAAATGGACAATTTTAAGCGGGTCATTTGAACCTTAGTGGAACAGAcat
tactgaggttaagcataccaggataatcacgacgacggactggttgaaac
tcactatagcctgttaaattttcgttcgtcgtcgtgattttacctaATTA
CTTAACTTCACTATTATAGTAATCCTAAGACGAAATATTgaaaggcaatt
tttttcgtGGACAACCTTCATGATTCCTTTTTTTGTGTGCCGTTATTCAG
GTAATATAATATATACAAATTGTTCATTCAGTAAGTAAATAAATGTATAC
AACCCCATCTCAAAGACCCAGTAGGATTCTTTCTGTCCTACTGAcaaaaa
ataacggaccaaaactcgattgTGATTTATAtttccatgttttttatggc
ttggGATGTGAAttccctcccgaattgaaatattcaattaCATTTAACAa
atctcgcccgaactttaaatttttcaaaaagaggaaataaccaaaattct
caatatagaTTGTagaaaattcaatggggatagaaaaatagcacaataat
tTGCGGTGGGG
Run BLAST on NCBI

protein sequence of TCONS_00021725-protein

>TCONS_00021725-protein ID=TCONS_00021725-protein|Name=TCONS_00021725-protein|organism=Clytia hemisphaerica|type=polypeptide|length=454bp
MQDRYTIMFILKKYFIVILLLESKTFGVRAHQHDYKYDRTYRDKRSTLHT
YLKLKNLNELGCILACSNDFECGSINYNKELKFCELNEIQKDNDQHTELL
KIDKGWNHFIKRKSSPAITPVSQEFSIPGEIVPERNKLVHIIPTQEKTWE
LSFEFKILQKQDGVTSLIRLMDENCKTDHQQIGCRTPAIFLASDRLHITF
SSDINPNQNINTGSFALNQKHKFKMRRGVNSCKTPSKQYTSIYINDVLLE
EFEHHGIQPTSTNVQVYVADGYWPKAPAVIFDLKYTHDALYPGNLFELRS
GRCLAYYEQWPPSDSWFVSFDYMITSAVPIGYRRMIQFKEIGSARGQIGY
WFPFLERVRNSMRFKTAYWINGQVSSVCANQDLTPFVGRFVPIRIEQIKQ
SDGRTFMSLYVDGNKICTTENTTPETVGPTEFIIAGYFDDEPRIVFRDIK
VESI
Run BLAST on NCBI

transcript from alignment at sc0000393:95547..104758-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021725 ID=TCONS_00021725|Name=TCONS_00021725|organism=Clytia hemisphaerica|type=transcript|length=9212bp|location=Sequence derived from alignment at sc0000393:95547..104758- (Clytia hemisphaerica)
CACGGGACGCTCAAAATTGAAAATCGATACAAATTAATTTTCAAAATACA
GTTCATACTTCATTGTGTTACCAAGGTGACCAATAATATCCAATTGAAAT
CTCTTTAATATCCCATTTATTGAAAACTGATTTGAAAAAAATATATATGT
TTTTTTTCGACACGGAATTATTTTTTTTGGTACTTTTTTATCATTCTAAG
GATGCAGGATAGATATACGATAATGTTTATTTTGAAGAAATATTTTATTG
TTATTTTGCTTCTTGAAAGCAAAACTTTTGGTGTTCGTGCACATCAGCAT
GATTATAAGTATGATCGAACCTATCGAGATAAGCGATCAACATTGCATAC
ATATTTAAAGTTGAAAAATTTAAATGAACTTGGGTGCATTTTGGCTTGTT
CGAATGACTTTGAATGTGGCTCAATTAACTATAATAAAGAATTAAAGTTC
TGTGAGCTGAACGAAATTCAAAAAGATAACGACCAGCATACTGAATTATT
GAAGATCGATAAAGGATGGAATCATTTTATTAAACGCAAGGTATCTTTGC
TAATTCCAGTTTTGATTATTTTAAGGGGGTCTGACCTCGACGGCTAACGG
CGGAGTCAAAAAATGCAACCGTCTGTAGTAGTGTTCTCAGTGTTGTCGGA
AAATTTGTGTAGGAGAGTACAATTTTTGTTACGAAGTAATTATCTTTTAA
ATGTTATGAATAGATTATTACTTTGTCACAAAAATCTGCTCTCCTACACA
GACTTTCTGACACCCCCGAGAATGCTACTGTCGATTTAAGAACAATCCCC
CCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCTGAGGATCCAAAAGT
TCAAAAATAGTCCAATAAGGCTCAGAATATAGCCTGGAAGTCTGCCAACT
CCTCCCAAATTGAAATATTCGATTAAATTAAAGAAGATAGCCCAAAATCG
ACTTTCTCGCCGGAAATTTAAATCTTGAAAAACCTTAAAATAACCAAAAT
TCTCAATATATTTCAACCATGCTTGCATAACTTTTTTCAATTTTCACCCT
GAAATGTGAGTTGGAGTTTACTGGTAATGATATTTTATCACACCAATTAG
TTTATGATATTCTATTCGTTTTATTTTCAGTCAAGTCCTGCTATCACTCC
AGTTTCCCAAGAATTCTCCATTCCAGGGGGTAAGTAAAACTTTGATTGGA
TACCAGTTTTGTCAACAGACAAATTACGTTTATGGGAAGCTCTGTGTCGA
TTGGGCCTGAATGAATTTGAATGAATAAAAGGTTTCTAGAACCATGTCAA
ATTTTTGGCTCAAAGGGAAATGGTGCTGCTTTCCAATGAAAAGAGGTCAA
TCAACTTGCAAGTTTGCTCTGAGGATTTGTACGCAAGAAAAATAAATAGC
CCAGCTGCCATAAAGCGTTGTTTCAACGTTCATCTAACGTTATATGGATG
TTGTGAACATCAGATAAACGTTGAAATAACGTTGTGTGCCAGCCAGCTGG
GAGAGAACAGTTTTAAAAAGAAATGAGTTGTTCGCTTTGCCACCGTCTTG
AGTACTGCAAAACACCCGGTTAAAATGAAACTTTAACGAGTACAGTTGGG
GGGGGGGGGACAGAGGCAGGGGACTAANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGTA
CAGAGGCAGGGTACTAACCCATAGGGTACTAACTTGATTTTTCACTCAAT
TTCTTTTTAGTACCGGGTACTACTTCATTTCTGCTGTAAAAAAAGACACC
ACCCCCTAAAATCTTATATTTTACAGATTAGACCAAAAGAGAGGGTACTA
TGTTAGTTTTTCTGACTGAAATGGAGAGATAATTCAAACAAACTATCATT
GATTAAGTCAGAGGCTTTTGTCCTTTGATTTTAATAACACACTTCTTGAC
AATTTCGGAAGTTTTGTCTTCACAAAAATCAAAAAATTTCTCAAAAGAGT
AAAAAAAAGTTTCTCAATTAAAAAAAATTTTAAATCAAAAAAATAATATT
TGAAAAAAGTCAAAATATTACAAAAGACTCCTTTTTTTATTAAAAAAGGA
GCAAAGCTCTGTGAAAAAGTACCCAAATAGTACCCTGTACTTGCTAGAAG
AGTGAAAATACACACCCCCACCCCTAAAGTAGTACCGGGTACTAACTTTT
TTGAAATGCAAAAATAGACACCACCACCCGGCTATGGGTTAGTACTCTGC
CTTTGTACCCCCCCCTGACGAGTACATTCTTTTTTTAATAAGCATACATG
AAAATCGGGTCGAGGCTCAATATGCTTCTCAAAATCTCATTTTCAGTCTT
AATTTATGCTTATTTATATGCTTAGACTTCGATTTATATGCTTAGCATTA
AGCTAATTTTTTGCCGAATTTGATTGAAGTATGCTTAATACTAGTAATCG
TATGGTTTGGAGTGCAATTAACGATTAATCACGAGTAACAAAGGAGAAAA
GAGTAATTTGCACGAGTCCGAAGGACGAGTGCAANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNATTAGTATATATAATCACATGATAACGAGTGCAATTT
TCGAATTGTACGAGTTATTATGTGATTACGAGCTAATCGCGCAATGGCTT
TCATTACTTTTTCCCAGTTAGGAAAGTAAATTACAGAAATTACATTGAGA
GTTTTATATTTTTCTCTTCCCTTTATGTCTTTCTTTTATTGTTATTTATT
GATTTTCTTTCTCACAAAATAAATTTCGAATGCAATTAAAACGTTCGCGA
TGCAAAAAAAATGTAAGAAAAAACATTAAAATCAATTTTGTAAATATTGG
CGCCTCATTGAAGAATGTGATTAACGATTAATTGCTCAGAATTTTTTTAT
AGATTTTTTTATTCCAAATTGTTCCACTCACTAATATCTTTCCAACGATA
CCAAATTTATAAAGATTGAGGAATTCCTTCAAAAGTTATAGGTAAATGGA
AAAAGAGTGCACACTTATCGTGAATAGACTATAAGAGTGTATTTCATTTT
TCAAATTGTTTGATCCTCCTGAATGAGTTCAATAAAAATTTCAAACACAG
AAGCGACTTCATTTTATTTTCATAAAATCAAAATTTATTTAAGACGTTTC
GGTGTCATCCGACCACCATCATCAGTTTAAAAACATTGAAATGAAAATTT
CTAATCTGAAAATGTTAACAAATTGTTTAAAAAAAAAATGTACAAACGAG
GATAATTGGTAAGATCAAATAAAACAATACGCTATAAAATCTGCTATAAA
ATCAATCAATAAATAAATAAATTAGCAATAAAATGACTCTCAAGTGAATA
TGTGTATAGAAAAAATGACGACTAATTAAATAACAAAATAGGTTTTGATA
GTTTTTCATAGGTTTTCATTTTTCCTTTCATAGAAATCGTTCCAGAACGG
AATAAACTTGTTCACATCATTCCTACACAAGAGAAAACATGGGAGCTGTC
TTTTGAATTCAAAATCCTCCAAAAGCAAGATGGAGTAACCAGCTTGATAC
GTTTAATGGATGAGAACTGTAAAACAGACCATCAGCAGATAGGTTGTAGA
ACTCCAGCAATCTTTCTTGCATCAGATCGACTTCACATCACCTTTTCAAG
CGATATAAACCCTAACCAAAATATTAATACGGGTAGCTTTGCACTGAATC
AAAAACATAAATTCAAAATGAGACGTGGAGTTAACAGGTAAATTTGTTCA
AAGTCAAGTAATCTACACTATGGTCTGAGACGGTTGGCAAACGATATCAT
CCACCAGGATGCATCCCCTCTTATCCCCCCCCCCCCTTATAGGGCAAAAA
ATGTCGAGGGAAAGTGACGAAAATTTTGAGGGGGTGACGAAATTTTCCCC
CGACGAATTTTTTCCCCGTTACTTTATCACCCGACCAAAACTTTTACCCA
ATTTCTTTTAAACCCCAACCAAAATTAAAATCTAAATTTTTCACAGCTTT
ACTAACCAAAATTATATAAACGTCGAATCTTTTTTCGAGCTAGTGAAGGA
AACCATTTCATTTGGACAATTTAGTTGGGTGAAAGTGACTAAATAGTAAA
TTTGGTCGGGGAAAAGTGACGAATTTGAAATTTTGGTCGGGGGAAAGTGA
CAAAAACGCCTCTAGGTGGCGAAATTTTTCCCCGACGAAAAAAAACCCCG
ACTAAATAAAACTCCGACATTTTTTCCCCCAATAAGATATTTTCTACTTT
CCTATCTCCTTTCCTGATTCTAAGACTTTTTGAAATGTTTCTCACTGTTT
TCTAAGTATTTTTCTGAAATTTGCCCGTACCGGTGAAATAGGTCTCCAAC
CCCGGCTCGAAATGCAAGCAACCTTGGTTTTCAAACCCAATGCCTAACCG
CTTGCGTCAACGAGACACGACAGAAAGCTGTCATTCACAAATAGTTACTT
ATAGCGTGTATTTTCCATTAAACTTCCAAATTTTGGAACAAATTTAGAAA
ATTTAACAGTTGGAAACAACTAGGAAGATTTATTATAATGATTTTTGAAT
TTTAGAGTGCCGATTATTGGATTGAACATGAAATCATGCTTTAATTAAGA
GAATATATTTTGCTTTAATATACCATTTGGCTAATTTTTCGTGCAGCCTG
GCGCAATTTGTTTTTTGGCAAATTTAGATATTATTTTAATTCGGCGAGTA
TTAATTATAACGAATTACCCGATACGTAATATATTTAAAAATAGAGTTTT
AAGGTTGTTTTTAGGATATATCTGGTCCAGATAATTTAATTCAGTGAAAA
GTAATTTTGGGTAAAATTTGGCAACTTTTTGAGACAATTCACCAAATTTT
CCATAATTGGTTTATATTTTGTTCAACTTTAATTATAGTTGTAAAACTCC
TTCCAAGCAATACACATCAATATATATAAATGACGTACTGCTAGAGGAGT
TTGAGCACCATGGAATACAACCTACCTCAACTAATGTTCAAGTTTATGTT
GCAGATGGTTATTGGCCAAAAGCACCGGCAGTTATCTTTGATCTTAAATA
TACTCACGATGCTCTATACCCAGGTAAAATTACATACTTGACTTCTTATA
TTCCGAGTGTTGTTGCTGATCATAATTCCGGATATAGGAAGTTTTCCAGC
ATTGGGTTTTTCCAGAAAAAAATTGAATATGGGGGCTGGAGGATATAGCA
TTTTAGAAATTTACCCCCTCCCAGACATTGTGAATTTTGACCCCCCAGAC
AGCAGGTCTTTGAACCCCTCCCCCTGGAAAAGCATCAAATGACCCCCCTG
GACATTCAAAATAACCCTCAAACCGAGAAAAATTACCCCCAAACAGAGCA
AGTCTATGCCCCGGACAGGGCAAATTTTGTAAATTTTTCGCTATACCCCC
GGACACTATATCCTCATACCCCCATGTACGAACATCACATCCTCTGGACA
TTAAGAGTACTGCTATATCTTCCCCATCAGCAACTGAAGGAGCGTTAGGG
ACTCTTTTTTAGTTTCTTTCTAATTCTACGAACTTTTTACATACACATTA
GCTTTGTTGCTCAAATGAAGTGTATTTATGATGTGATCATGGATCATGTC
TAGTCAGATGATACAAAATGCCTTAAACTCGAAAAATTCAAGAAATAACC
ATCTAAAAACTTACTCCCCCCCCTTTATCATCACAATTATTGTATTATTA
AATACTAAGCACTATACTTTTTAAATTAGGGAATCTATTTGAATTGCGCT
CGGGACGATGTTTGGCGTATTACGAACAATGGCCACCGTCTGATAGTTGG
TTCGTCTCGTTTGATTATATGATCACTTCAGCTGTGCCAATCGGCTACCG
TCGAATGATACAATTCAAAGAAATCGGTTCAGCGCGAGGCCAAATTGGAT
ATTGGTTTCCTTTTTTAGAACGTGTTAGAAATAGTATGCGATTCAAAACA
GCATATTGGATAAACGGTCAGGTTAGTTCTGTATGCGCCAATCAAGATTT
AACTCCCTTTGTTGGGCGTTTTGTTCCGATACGGATTGAACAGATAAAAC
AATCGGATGGTAGAACCTTCATGTCTTTATACGTTGACGGTAACAAGATC
TGTACCACAGAAAATACTACCCCAGAAACTGTTGGTCCTACTGAGTTCAT
TATTGCAGGATATTTCGATGACGAACCTAGGATCGTTTTTAGAGACATTA
AAGTGGAATCAATATAATGATGGTTATTGAGTAAAAAGATGGTTAGGTTT
GGAAAATGGACAATTTTAAGCGGGTCATTTGAACCTTAGTGGAACAGACA
TTACTGAGGTTAAGCATACCAGGATAATCACGACGACGGACTGGTTGAAA
CTCACTATAGCCTGTTAAATTTTCGTTCGTCGTCGTGATTTTACCTAATT
ACTTAACTTCACTATTATAGTAATCCTAAGACGAAATATTGAAAGGCAAT
TTTTTTCGTGGACAACCTTCATGATTCCTTTTTTTGTGTGCCGTTATTCA
GGTAATATAATATATACAAATTGTTCATTCAGTAAGTAAATAAATGTATA
CAACCCCATCTCAAAGACCCAGTAGGATTCTTTCTGTCCTACTGACAAAA
AATAACGGACCAAAACTCGATTGTGATTTATATTTCCATGTTTTTTATGG
CTTGGGATGTGAATTCCCTCCCGAATTGAAATATTCAATTACATTTAACA
AATCTCGCCCGAACTTTAAATTTTTCAAAAAGAGGAAATAACCAAAATTC
TCAATATAGATTGTAGAAAATTCAATGGGGATAGAAAAATAGCACAATAA
TTTGCGGTGGGG

Coding sequence (CDS) from alignment at sc0000393:95547..104758-

>TCONS_00021725 ID=TCONS_00021725|Name=TCONS_00021725|organism=Clytia hemisphaerica|type=CDS|length=6825bp|location=Sequence derived from alignment at sc0000393:95547..104758- (Clytia hemisphaerica)
GGAATCTATTTGAATTGCGCTCGGGACGATGTTTGGCGTATTACGAACAA
TGGCCACCGTCTGATAGTTGGTTCGTCTCGTTTGATTATATGATCACTTC
AGCTGTGCCAATCGGCTACCGTCGAATGATACAATTCAAAGAAATCGGTT
CAGCGCGAGGCCAAATTGGATATTGGTTTCCTTTTTTAGAACGTGTTAGA
AATAGTATGCGATTCAAAACAGCATATTGGATAAACGGTCAGGTTAGTTC
TGTATGCGCCAATCAAGATTTAACTCCCTTTGTTGGGCGTTTTGTTCCGA
TACGGATTGAACAGATAAAACAATCGGATGGTAGAACCTTCATGTCTTTA
TACGTTGACGGTAACAAGATCTGTACCACAGAAAATACTACCCCAGAAAC
TGTTGGTCCTACTGAGTTCATTATTGCAGGATATTTCGATGACGAACCTA
GGATCGTTTTTAGAGACATTAAAGTGGAATCAATATAATTGTAAAACTCC
TTCCAAGCAATACACATCAATATATATAAATGACGTACTGCTAGAGGAGT
TTGAGCACCATGGAATACAACCTACCTCAACTAATGTTCAAGTTTATGTT
GCAGATGGTTATTGGCCAAAAGCACCGGCAGTTATCTTTGATCTTAAATA
TACTCACGATGCTCTATACCCAGAAATCGTTCCAGAACGGAATAAACTTG
TTCACATCATTCCTACACAAGAGAAAACATGGGAGCTGTCTTTTGAATTC
AAAATCCTCCAAAAGCAAGATGGAGTAACCAGCTTGATACGTTTAATGGA
TGAGAACTGTAAAACAGACCATCAGCAGATAGGTTGTAGAACTCCAGCAA
TCTTTCTTGCATCAGATCGACTTCACATCACCTTTTCAAGCGATATAAAC
CCTAACCAAAATATTAATACGGGTAGCTTTGCACTGAATCAAAAACATAA
ATTCAAAATGAGACGTGGAGTTAACAGTCAAGTCCTGCTATCACTCCAGT
TTCCCAAGAATTCTCCATTCCAGGGGATGCAGGATAGATATACGATAATG
TTTATTTTGAAGAAATATTTTATTGTTATTTTGCTTCTTGAAAGCAAAAC
TTTTGGTGTTCGTGCACATCAGCATGATTATAAGTATGATCGAACCTATC
GAGATAAGCGATCAACATTGCATACATATTTAAAGTTGAAAAATTTAAAT
GAACTTGGGTGCATTTTGGCTTGTTCGAATGACTTTGAATGTGGCTCAAT
TAACTATAATAAAGAATTAAAGTTCTGTGAGCTGAACGAAATTCAAAAAG
ATAACGACCAGCATACTGAATTATTGAAGATCGATAAAGGATGGAATCAT
TTTATTAAACGCAAGGGAATCTATTTGAATTGCGCTCGGGACGATGTTTG
GCGTATTACGAACAATGGCCACCGTCTGATAGTTGGTTCGTCTCGTTTGA
TTATATGATCACTTCAGCTGTGCCAATCGGCTACCGTCGAATGATACAAT
TCAAAGAAATCGGTTCAGCGCGAGGCCAAATTGGATATTGGTTTCCTTTT
TTAGAACGTGTTAGAAATAGTATGCGATTCAAAACAGCATATTGGATAAA
CGGTCAGGTTAGTTCTGTATGCGCCAATCAAGATTTAACTCCCTTTGTTG
GGCGTTTTGTTCCGATACGGATTGAACAGATAAAACAATCGGATGGTAGA
ACCTTCATGTCTTTATACGTTGACGGTAACAAGATCTGTACCACAGAAAA
TACTACCCCAGAAACTGTTGGTCCTACTGAGTTCATTATTGCAGGATATT
TCGATGACGAACCTAGGATCGTTTTTAGAGACATTAAAGTGGAATCAATA
TAATTGTAAAACTCCTTCCAAGCAATACACATCAATATATATAAATGACG
TACTGCTAGAGGAGTTTGAGCACCATGGAATACAACCTACCTCAACTAAT
GTTCAAGTTTATGTTGCAGATGGTTATTGGCCAAAAGCACCGGCAGTTAT
CTTTGATCTTAAATATACTCACGATGCTCTATACCCAGAAATCGTTCCAG
AACGGAATAAACTTGTTCACATCATTCCTACACAAGAGAAAACATGGGAG
CTGTCTTTTGAATTCAAAATCCTCCAAAAGCAAGATGGAGTAACCAGCTT
GATACGTTTAATGGATGAGAACTGTAAAACAGACCATCAGCAGATAGGTT
GTAGAACTCCAGCAATCTTTCTTGCATCAGATCGACTTCACATCACCTTT
TCAAGCGATATAAACCCTAACCAAAATATTAATACGGGTAGCTTTGCACT
GAATCAAAAACATAAATTCAAAATGAGACGTGGAGTTAACAGTCAAGTCC
TGCTATCACTCCAGTTTCCCAAGAATTCTCCATTCCAGGGGATGCAGGAT
AGATATACGATAATGTTTATTTTGAAGAAATATTTTATTGTTATTTTGCT
TCTTGAAAGCAAAACTTTTGGTGTTCGTGCACATCAGCATGATTATAAGT
ATGATCGAACCTATCGAGATAAGCGATCAACATTGCATACATATTTAAAG
TTGAAAAATTTAAATGAACTTGGGTGCATTTTGGCTTGTTCGAATGACTT
TGAATGTGGCTCAATTAACTATAATAAAGAATTAAAGTTCTGTGAGCTGA
ACGAAATTCAAAAAGATAACGACCAGCATACTGAATTATTGAAGATCGAT
AAAGGATGGAATCATTTTATTAAACGCAAGGGAATCTATTTGAATTGCGC
TCGGGACGATGTTTGGCGTATTACGAACAATGGCCACCGTCTGATAGTTG
GTTCGTCTCGTTTGATTATATGATCACTTCAGCTGTGCCAATCGGCTACC
GTCGAATGATACAATTCAAAGAAATCGGTTCAGCGCGAGGCCAAATTGGA
TATTGGTTTCCTTTTTTAGAACGTGTTAGAAATAGTATGCGATTCAAAAC
AGCATATTGGATAAACGGTCAGGTTAGTTCTGTATGCGCCAATCAAGATT
TAACTCCCTTTGTTGGGCGTTTTGTTCCGATACGGATTGAACAGATAAAA
CAATCGGATGGTAGAACCTTCATGTCTTTATACGTTGACGGTAACAAGAT
CTGTACCACAGAAAATACTACCCCAGAAACTGTTGGTCCTACTGAGTTCA
TTATTGCAGGATATTTCGATGACGAACCTAGGATCGTTTTTAGAGACATT
AAAGTGGAATCAATATAATTGTAAAACTCCTTCCAAGCAATACACATCAA
TATATATAAATGACGTACTGCTAGAGGAGTTTGAGCACCATGGAATACAA
CCTACCTCAACTAATGTTCAAGTTTATGTTGCAGATGGTTATTGGCCAAA
AGCACCGGCAGTTATCTTTGATCTTAAATATACTCACGATGCTCTATACC
CAGAAATCGTTCCAGAACGGAATAAACTTGTTCACATCATTCCTACACAA
GAGAAAACATGGGAGCTGTCTTTTGAATTCAAAATCCTCCAAAAGCAAGA
TGGAGTAACCAGCTTGATACGTTTAATGGATGAGAACTGTAAAACAGACC
ATCAGCAGATAGGTTGTAGAACTCCAGCAATCTTTCTTGCATCAGATCGA
CTTCACATCACCTTTTCAAGCGATATAAACCCTAACCAAAATATTAATAC
GGGTAGCTTTGCACTGAATCAAAAACATAAATTCAAAATGAGACGTGGAG
TTAACAGTCAAGTCCTGCTATCACTCCAGTTTCCCAAGAATTCTCCATTC
CAGGGGATGCAGGATAGATATACGATAATGTTTATTTTGAAGAAATATTT
TATTGTTATTTTGCTTCTTGAAAGCAAAACTTTTGGTGTTCGTGCACATC
AGCATGATTATAAGTATGATCGAACCTATCGAGATAAGCGATCAACATTG
CATACATATTTAAAGTTGAAAAATTTAAATGAACTTGGGTGCATTTTGGC
TTGTTCGAATGACTTTGAATGTGGCTCAATTAACTATAATAAAGAATTAA
AGTTCTGTGAGCTGAACGAAATTCAAAAAGATAACGACCAGCATACTGAA
TTATTGAAGATCGATAAAGGATGGAATCATTTTATTAAACGCAAGGGAAT
CTATTTGAATTGCGCTCGGGACGATGTTTGGCGTATTACGAACAATGGCC
ACCGTCTGATAGTTGGTTCGTCTCGTTTGATTATATGATCACTTCAGCTG
TGCCAATCGGCTACCGTCGAATGATACAATTCAAAGAAATCGGTTCAGCG
CGAGGCCAAATTGGATATTGGTTTCCTTTTTTAGAACGTGTTAGAAATAG
TATGCGATTCAAAACAGCATATTGGATAAACGGTCAGGTTAGTTCTGTAT
GCGCCAATCAAGATTTAACTCCCTTTGTTGGGCGTTTTGTTCCGATACGG
ATTGAACAGATAAAACAATCGGATGGTAGAACCTTCATGTCTTTATACGT
TGACGGTAACAAGATCTGTACCACAGAAAATACTACCCCAGAAACTGTTG
GTCCTACTGAGTTCATTATTGCAGGATATTTCGATGACGAACCTAGGATC
GTTTTTAGAGACATTAAAGTGGAATCAATATAATTGTAAAACTCCTTCCA
AGCAATACACATCAATATATATAAATGACGTACTGCTAGAGGAGTTTGAG
CACCATGGAATACAACCTACCTCAACTAATGTTCAAGTTTATGTTGCAGA
TGGTTATTGGCCAAAAGCACCGGCAGTTATCTTTGATCTTAAATATACTC
ACGATGCTCTATACCCAGAAATCGTTCCAGAACGGAATAAACTTGTTCAC
ATCATTCCTACACAAGAGAAAACATGGGAGCTGTCTTTTGAATTCAAAAT
CCTCCAAAAGCAAGATGGAGTAACCAGCTTGATACGTTTAATGGATGAGA
ACTGTAAAACAGACCATCAGCAGATAGGTTGTAGAACTCCAGCAATCTTT
CTTGCATCAGATCGACTTCACATCACCTTTTCAAGCGATATAAACCCTAA
CCAAAATATTAATACGGGTAGCTTTGCACTGAATCAAAAACATAAATTCA
AAATGAGACGTGGAGTTAACAGTCAAGTCCTGCTATCACTCCAGTTTCCC
AAGAATTCTCCATTCCAGGGGATGCAGGATAGATATACGATAATGTTTAT
TTTGAAGAAATATTTTATTGTTATTTTGCTTCTTGAAAGCAAAACTTTTG
GTGTTCGTGCACATCAGCATGATTATAAGTATGATCGAACCTATCGAGAT
AAGCGATCAACATTGCATACATATTTAAAGTTGAAAAATTTAAATGAACT
TGGGTGCATTTTGGCTTGTTCGAATGACTTTGAATGTGGCTCAATTAACT
ATAATAAAGAATTAAAGTTCTGTGAGCTGAACGAAATTCAAAAAGATAAC
GACCAGCATACTGAATTATTGAAGATCGATAAAGGATGGAATCATTTTAT
TAAACGCAAGGGAATCTATTTGAATTGCGCTCGGGACGATGTTTGGCGTA
TTACGAACAATGGCCACCGTCTGATAGTTGGTTCGTCTCGTTTGATTATA
TGATCACTTCAGCTGTGCCAATCGGCTACCGTCGAATGATACAATTCAAA
GAAATCGGTTCAGCGCGAGGCCAAATTGGATATTGGTTTCCTTTTTTAGA
ACGTGTTAGAAATAGTATGCGATTCAAAACAGCATATTGGATAAACGGTC
AGGTTAGTTCTGTATGCGCCAATCAAGATTTAACTCCCTTTGTTGGGCGT
TTTGTTCCGATACGGATTGAACAGATAAAACAATCGGATGGTAGAACCTT
CATGTCTTTATACGTTGACGGTAACAAGATCTGTACCACAGAAAATACTA
CCCCAGAAACTGTTGGTCCTACTGAGTTCATTATTGCAGGATATTTCGAT
GACGAACCTAGGATCGTTTTTAGAGACATTAAAGTGGAATCAATATAATT
GTAAAACTCCTTCCAAGCAATACACATCAATATATATAAATGACGTACTG
CTAGAGGAGTTTGAGCACCATGGAATACAACCTACCTCAACTAATGTTCA
AGTTTATGTTGCAGATGGTTATTGGCCAAAAGCACCGGCAGTTATCTTTG
ATCTTAAATATACTCACGATGCTCTATACCCAGAAATCGTTCCAGAACGG
AATAAACTTGTTCACATCATTCCTACACAAGAGAAAACATGGGAGCTGTC
TTTTGAATTCAAAATCCTCCAAAAGCAAGATGGAGTAACCAGCTTGATAC
GTTTAATGGATGAGAACTGTAAAACAGACCATCAGCAGATAGGTTGTAGA
ACTCCAGCAATCTTTCTTGCATCAGATCGACTTCACATCACCTTTTCAAG
CGATATAAACCCTAACCAAAATATTAATACGGGTAGCTTTGCACTGAATC
AAAAACATAAATTCAAAATGAGACGTGGAGTTAACAGTCAAGTCCTGCTA
TCACTCCAGTTTCCCAAGAATTCTCCATTCCAGGGGATGCAGGATAGATA
TACGATAATGTTTATTTTGAAGAAATATTTTATTGTTATTTTGCTTCTTG
AAAGCAAAACTTTTGGTGTTCGTGCACATCAGCATGATTATAAGTATGAT
CGAACCTATCGAGATAAGCGATCAACATTGCATACATATTTAAAGTTGAA
AAATTTAAATGAACTTGGGTGCATTTTGGCTTGTTCGAATGACTTTGAAT
GTGGCTCAATTAACTATAATAAAGAATTAAAGTTCTGTGAGCTGAACGAA
ATTCAAAAAGATAACGACCAGCATACTGAATTATTGAAGATCGATAAAGG
ATGGAATCATTTTATTAAACGCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012188XLOC_012188Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021725-exon-sc0000393-1575043694:104219..104758TCONS_00021725-exon-sc0000393-1575043694:104219..104758Clytia hemisphaericaexon
TCONS_00021725-exon-sc0000393-1575043694:102580..102628TCONS_00021725-exon-sc0000393-1575043694:102580..102628Clytia hemisphaericaexon
TCONS_00021725-exon-sc0000393-1575043694:98622..98925TCONS_00021725-exon-sc0000393-1575043694:98622..98925Clytia hemisphaericaexon
TCONS_00021725-exon-sc0000393-1575043694:97286..97470TCONS_00021725-exon-sc0000393-1575043694:97286..97470Clytia hemisphaericaexon
TCONS_00021725-exon-sc0000393-1575043694:95547..96629TCONS_00021725-exon-sc0000393-1575043694:95547..96629Clytia hemisphaericaexon
TCONS_00021725-exon-sc0000393-1510915933:104219..104758TCONS_00021725-exon-sc0000393-1510915933:104219..104758Clytia hemisphaericaexon
TCONS_00021725-exon-sc0000393-1510915933:102580..102628TCONS_00021725-exon-sc0000393-1510915933:102580..102628Clytia hemisphaericaexon
TCONS_00021725-exon-sc0000393-1510915933:98622..98925TCONS_00021725-exon-sc0000393-1510915933:98622..98925Clytia hemisphaericaexon
TCONS_00021725-exon-sc0000393-1510915933:97286..97470TCONS_00021725-exon-sc0000393-1510915933:97286..97470Clytia hemisphaericaexon
TCONS_00021725-exon-sc0000393-1510915933:95547..96629TCONS_00021725-exon-sc0000393-1510915933:95547..96629Clytia hemisphaericaexon
TCONS_00021725-exon-sc0000393-1491911889:104219..104758TCONS_00021725-exon-sc0000393-1491911889:104219..104758Clytia hemisphaericaexon
TCONS_00021725-exon-sc0000393-1491911889:102580..102628TCONS_00021725-exon-sc0000393-1491911889:102580..102628Clytia hemisphaericaexon
TCONS_00021725-exon-sc0000393-1491911889:98622..98925TCONS_00021725-exon-sc0000393-1491911889:98622..98925Clytia hemisphaericaexon
TCONS_00021725-exon-sc0000393-1491911889:97286..97470TCONS_00021725-exon-sc0000393-1491911889:97286..97470Clytia hemisphaericaexon
TCONS_00021725-exon-sc0000393-1491911889:95547..96629TCONS_00021725-exon-sc0000393-1491911889:95547..96629Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021725-proteinTCONS_00021725-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000393supercontigsc0000393:95547..104758 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000108665	0.000160359	5.33934e-05	1.92545e-05	1.0251	0.000190601	0.000589299	0.730834	0.54613	0.467444	0.0162482	0.456875	2.98044	1.74858	0.739488	0.773847	0.326733	0.176969	2.55986	2.64481	0.472011	0.000176524	0.000162546	0.924811	2.68499	2.39056	2.19484e-05	2.6768e-05	0.000129769	0.000196307
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021725 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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