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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022568 ID=TCONS_00022568|Name=TCONS_00022568|organism=Clytia hemisphaerica|type=transcript|length=1399bp
TCTTGCAACTTATTTTATTTCCCCTAGCTTTAGGTACGTTTGTATGAATC
TGGCAAATATACTTTTTCGTTTtctattctttcattttcagtatcaaaaa
tatataaaccaatcaatatgaaaagaaaaacatgacaCTGATAAAACATC
AATAAAAGTAATATACTTCTTTTGAACCAACCAATCAACCAAAAGATGGC
AGAAGACGAATTAATGCAGCTACTTCAAGTTGATCTCACTGCTATTGAGT
TGGATGCCAAAAATCTTCATCCtaaaaaatgCAGTGCACGCCAATATGTT
GAGACATTTATCTTCCCAACCTTGCTCCCTGGGTTGAACGATTTGTTTCA
AGCAGCAAAAGACAATCTTGTGTTTGAAAAAAGAAGGACGAAATTCAACG
CATGTGACTTTCTTACTGAGTACCTTTACAACAATAATCCAACACCGAAA
GATCGTGAGAAGCAAGGCTTATGGGATATCCCCTTCGTCAAAGAAATCAA
CGGAAGAAACCCTCGACCTCCCATTCCACTTTCATTGATATGGACAGAGG
CTGAAGCAGCTTTAGTCATACAATCTCACTGGAAAGGATATCTTGTGAGG
AAGGAACCTGAAGTTCAAGAGTTGCGACAGTAccaaaaagaaatgaaaga
gAGTTCGTATCACATTATGTTCAAAGTGGAAGAATTTTggaagcaacata
aaattgaaGACCTCGACGAGGCTGAAGAAGTTATTGAAGATACTTTAATC
AAAACTGACTTTCTATAGGAATTACTCTTATTTTTGTTTGGGCAATCGAG
ATtagtataaaaaattgacttaaaaacttttaattttgtaTGGTCAATCC
AGACTTTTATTGACTTTTTGTTGATGATGCGATGATGAAAAGNTTAATTT
TGTATGGTCAATCCAGACTTATATTGACTTTTTGTTGATGATGTGAtgat
gaaaagtttttaaccaaaATAACTTTCTATAGAAAACCCTCTTGGTATTG
TTTGGCTTATCGAGGTGTACCTATATTCTTAGTGGATTAAACATTTACAG
TTTTTTGATGAATGGAGACTTTTCCTGTGAAAGCACTATAATTCTATTGA
ATGAGTTTCACTAATCTCATTGTAGATTTATTAAAATGAACCTGTTAATA
TGCTATTTGATGATGTAATATATTCTAATTTAGAAATAATTAAACAAATG
TAtcaaagaaattattttataataatgctatacaagttcgcaggccaccg
tgcagGCACATGGGCCGCTCTTTTTTCGGTTTATAATTTTCTTAAGGTAG
AGATTTTTTCCTAGGGAAATTTGAAGTTTGTGTCTTCTATTGAATTATTC
ATTTTGATTAGTTAAATTCCTAATATGAATTGATGCCATAATAGTATTC Run BLAST on NCBI protein sequence of TCONS_00022568-protein >TCONS_00022568-protein ID=TCONS_00022568-protein|Name=TCONS_00022568-protein|organism=Clytia hemisphaerica|type=polypeptide|length=190bp
MAEDELMQLLQVDLTAIELDAKNLHPKKCSARQYVETFIFPTLLPGLNDL
FQAAKDNLVFEKRRTKFNACDFLTEYLYNNNPTPKDREKQGLWDIPFVKE
INGRNPRPPIPLSLIWTEAEAALVIQSHWKGYLVRKEPEVQELRQYQKEM
KESSYHIMFKVEEFWKQHKIEDLDEAEEVIEDTLIKTDFL Run BLAST on NCBI transcript from alignment at sc0000427:231949..237431+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022568 ID=TCONS_00022568|Name=TCONS_00022568|organism=Clytia hemisphaerica|type=transcript|length=5483bp|location=Sequence derived from alignment at sc0000427:231949..237431+ (Clytia hemisphaerica)
TCTTGCAACTTATTTTATTTCCCCTAGCTTTAGGTACGTTTGTATGAATC
TGGCAAATATACTTTTTCGTTTtctattctttcattttcagtatcaaaaa
tatataaaccaatcaatatgaaaagaaaaacatgacaCTGATAAAACATC
AATAAAAGTAATATACTTCTTTTGAACCAACCAATCAACCAAAAGATGGC
AGAAGACGAATTAATGCAGCTACTTCAAGTTGATCTCACTGCTATTGAGT
TGGATGCCAAAAATCTTCATCCtaaaaaatgtaagaattttTATCTTGGA
ATTGCTATACAATATTTTATTTGTATAGTTGCAaggttgaaaataaattt
gtatcaTTTTTCACCAAAAGAGATTATGGGTAGTTAGAAATTGTGTTACT
AAATAGCCCAAGAAAGATAAATTAGGCTTGAAAAGTAGACTATTTAGAGT
CAATTAGACACGTAAaagcaatgaagtataagcccgaagggctagagtcg
aatgggcttttccagaaatttttttacccccactgttgaggatattgaac
CCCCCtcatatcctactttattagtaaagaccacCTAGATATACACTcgc
ttaaaaatatgctcaaccccctggatatcctctcttataaagatgttTAC
CCCtagatatcgtattttttacttgaaaagacaacTACCCCCTAGATATC
CGCTCCCTtatagatatttaaccccctggatatccacttttgaacagaAA
TCGTTAACCCCttagatatccgatatcctcaacagggggggggggcacgg
actatttctggaaaagcccaatctccttggtaggagtTGAAGCCTactaa
atcctaccaaagtgaCGTGGCCTAGCGCggtccgcctggtttttacacaa
attatggattgaaactaaaatttacacctgaatttccaaaaagatatcac
tcgaaaacaaaggaatcggtagattcaatccgtcgtcaaaaatacagcac
atattttaaggctttactttttcttgcctgagaaaggttaaagattcgat
tctagcccttcgggcttatacttcattgcatAAAAGTAAGtatcaatttt
tctttattgtttTATGAGCGAAACGACCACAAGTCTAGTATAACCGGATG
GTTGAATCTTCCTTTTCTAGTACTATTCGACCAGGAAGTTAGCTTTTCAA
CTATATTGATGATAgaatattttacattttcaggCAGTGCACGCCAATAT
GTTGAGACATTTATCTTCCCAACCTTGCTCCCTGGGTTGAACGATTTGTT
TCAAGCAGCAAAAGACAATCTTGTGTTTGAAGTAAGTTCTTTAACGATAG
AATATCAACAAGCAATCGAATCGACGAGGTATGGTAGAGTGATCTAAGGG
GAGGAGGTACAGCATCAGGGTACTGGCCTATAGAGCCGGGTGTTGGTGTC
TAATTTTGAATCTCAAAAATGTTAGTACCCGTACTACCCCGGGTTTATCA
CTCATTTCAAGCTAGTGCTGAAATTTGGTATTATCGCCAGAATGGGTGAA
AACTTATCAATTTTTGCAAGTCAGAAtggaaatttctaattttgaaaaat
tgaattgtcGCAAAATACTTTTCATCTTTTAAGctcaaccaaattttgaa
atgttgcgattttttttacaagatttaAGCAGGAAAAAGGGCAGCTTAGT
TAACGCtctcaaatttgattttgagtGAATTGGATTNTTTTTTTTACATG
ATTTTCAGggttaaatgttcttaattccGCTCTTTTACTTATTTatataa
tttaatttatttcattcaGGGGAGACTACTAGTATTACGTTGGCATCGTT
CAAGACATACTTGACCTATTCAGTGCCGTAGAAAGCATTTCTATattggg
ggggctgaagtttagtgacaccgcgagggccaaccatggtttggcccgag
gggggaaattttgaaaatttgagctctagattacttgaaaatgcactcaa
aacatgcacttaaaagacaattatgacaaattaaaaaagaaaaactttgc
attttgcaaaataaccattttttttGCGTCAACTATATTTGAAAATTCAT
TTATAATGACATTGTCTTGAATTCCAGTTTGGCATTTATTTCATTATAAA
TATGTAACCCCTTCACGTAACCCCTTCACATAACCCATTGGTTTATGTTA
CTCTAGAAANCGAGTTTGACATTTATTTCATTATAAATATGTAACCCCTT
CACGTAACCCATTGGTTTTTGTTACTCTAGAAAAGAAGGACGAAATTCAA
CGCATGTGACTTTCTTACTGAGTACCTTTACAAGTAAGacaatattttgt
tcttttgaattaatcttttttattgTTAACTTAATAAATGCTTatcgatt
ttcaaaattcacgaaaaaacTGAGTTTATCCTGGTTGTATCATCACTTAg
gttagcctagaaatctaagctagacTGATTGAGTCACTTGGTTTGACTGA
TTTTTCGCTGTGATTAGAAATCTTTGAAACAACGATAACGCTTTATTGCC
ACAAGCCTAGCGAATTCGAGCTTGATTAACCAGGCCACACTTAGGTTTCA
TGACTAGACCAAAACACAACACGTGACCGCGTAGGGGGCACTTatatggt
ccgacccacggcttgtgccgcccttaagggtaggtttttcgagaccctcg
aaatgcactgtaagggtgtacttttgatagaatgtACTACAAGGGTTTAC
TTTTAGCTAGAAACACTGTAAGGGTACTGCTGAATCGTAAGTCTGGaagt
aaaaatctgatgtatttttatatttttgactttcatctattttgatttgt
tttgcatatTGTCTCGACATCTCAGGCTCTTTTTTgggtggcttcagcaa
aataagatatgcaATCAagctacactgtaagggtgagaAACGTTTGGTAA
GACGCACTGTAAGGGTGCCTTTTCACTGCTTaagagctgcactgtaaggg
tgcctTTTCACTGCTTaagagctgcactgtaagggtccgattttgaaagc
taATTTTTTGGTGGCACATgtcgtcgtttagaaatcgagtgccccccccc
gggtacaTGACAAGNATAGCTAATTTTTTGGTGGCACATgtcgtcgttta
gaaatcgagtgccccccgggTACATGACAAGTTAGTGATATCTGACACAG
AATCAAGTTATAAAGCTtctttcaattcacgcaattcgTTGGCTCCCCAT
CGTTATTAttataaatcataaaatttcTCTATTTCGATTCAGCAATAATC
CAACACCGAAAGATCGTGAGAAGCAAGGCTTATGGGATATCCCCTTCGTC
AAAGAAATCAACGGAAGAAAGTAAGGATCTTTTAAATTATTCTTTTGACG
TAAGGTGTAGAACTGCATTGTTTTCGAAATTAGTCTGGGTTTCTAGGTTT
GGCGTTGACTTTTGAATATCCTTTTTCTAGAGGAAACGCAAGTaggaaaa
taagtaaaaaaacctTTTATGCTTGAAAATCCAGAGTCTTAAAACTGCGA
GTAAGCATCGAATTGATAAAGTACAAAATCCCTCTCATATGTTTTGTTAC
AAGGGGCGCGAATCAACCTCAAAAGCCACGCCTgctttgcaatttttttg
ccaaactattataattttttgagaaatttttgacCTCATTAAAATTTCAT
TGAGGAAGGATATCATAAACTTACTTTCTTACAACTTTGGTGGCAAAGGT
TAAATAACAAGGGTCTATTCGCCGGCGACgagtttatctaacgttcatct
TACAATGTATACATTGAGCATTAGTTGGACGTTGACATACCGGGTATATG
CAAGCTGAggaattaacaaaaatattttaattctgTCCGGTCATTTTTAG
CCCTCGACCTCCCATTCCACTTTCATTGATATGGACAGAGGCTGAAGCAG
CTTTAGTCATACAATCTCACTGGAAAGGATATCTTGTGAGGAAGGAACCT
GAAGTTCAAGAGTTGCGACAGTAccaaaaagaaatgaaagagGTAAGTta
caaatttctttgatatcAAGAGTTAAAGGTTACACACACTACAAAACATG
TTGTCCGGTAATACATTGACAATATTTATTACCGAGTGTTGTCGATATAC
TTTTATAGAGTACATGTTATTTGTTCCGttcattacggtccgcaaaacat
AGTTGTTCGCCAatagatagaccttttcataaatttgcgtcacgaacatc
actcgcctcgtattcaaacaatttccatagtgatcatatcccttgagaca
tcaaatgattttttatgaatagaaagtatttgtaataaaatccgctggga
attaatcaccatggcaataatttcaaaacgaggtaagTGTTCGTGAcgca
atttatgaaaaggtctaagTCCCCTTAATTCTGTTCATTATGAAACGAAG
AAGATATCTTCCGAGTCGTTGATCTCGTAATGAATTAACTGAACCAAATA
TCCCCATGGCCCTATCAAATTCAAAACAGTCTTGTTTAaagcccccccca
gcggtttgcgtaaATGcttgaatgggctttttcacttacgtgaatgtgtg
aaaaacaaaagaaaattgcgtgaatgcgtgaatttgggaaaattttttgc
gtgattgtgtgaattgaaggtccgctggggggggggttctTTAAATAGGG
TTAATTTCGATGGATCAACTTTTGTTCTATTGTAGAGTTCGTATCACATT
ATGTTCAAAGTGGAAGAATTTTggaagcaacataaaattgaaGACCTCGA
CGAGGCTGAAGAAGTTATTGAAGATACTTTAATCAAAACTGACTTTCTAT
AGGAATTACTCTTATTTTTGTTTGGGCAATCGAGATtagtataaaaaatt
gacttaaaaacttttaattttgtaTGGTCAATCCAGACTTTTATTGACTT
TTTGTTGATGATGCGATGATGAAAAGNTTAATTTTGTATGGTCAATCCAG
ACTTATATTGACTTTTTGTTGATGATGTGAtgatgaaaagtttttaacca
aaATAACTTTCTATAGAAAACCCTCTTGGTATTGTTTGGCTTATCGAGGT
GTACCTATATTCTTAGTGGATTAAACATTTACAGTTTTTTGATGAATGGA
GACTTTTCCTGTGAAAGCACTATAATTCTATTGAATGAGTTTCACTAATC
TCATTGTAGATTTATTAAAATGAACCTGTTAATATGCTATTTGATGATGT
AATATATTCTAATTTAGAAATAATTAAACAAATGTAtcaaagaaattatt
ttataataatgctatacaagttcgcaggccaccgtgcagGCACATGGGCC
GCTCTTTTTTCGGTTTATAATTTTCTTAAGGTAGAGATTTTTTCCTAGGG
AAATTTGAAGTTTGTGTCTTCTATTGAATTATTCATTTTGATTAGTTAAA
TTCCTAATATGAATTGATGCCATAATAGTATTC Coding sequence (CDS) from alignment at sc0000427:231949..237431+ >TCONS_00022568 ID=TCONS_00022568|Name=TCONS_00022568|organism=Clytia hemisphaerica|type=CDS|length=3438bp|location=Sequence derived from alignment at sc0000427:231949..237431+ (Clytia hemisphaerica)
ATGGCAGAAGACGAATTAATGCAGCTACTTCAAGTTGATCTCACTGCTAT
TGAGTTGGATGCCAAAAATCTTCATCCtaaaaaatgCAGTGCACGCCAAT
ATGTTGAGACATTTATCTTCCCAACCTTGCTCCCTGGGTTGAACGATTTG
TTTCAAGCAGCAAAAGACAATCTTGTGTTTGAAAAAAGAAGGACGAAATT
CAACGCATGTGACTTTCTTACTGAGTACCTTTACAACAATAATCCAACAC
CGAAAGATCGTGAGAAGCAAGGCTTATGGGATATCCCCTTCGTCAAAGAA
ATCAACGGAAGAAACCCTCGACCTCCCATTCCACTTTCATTGATATGGAC
AGAGGCTGAAGCAGCTTTAGTCATACAATCTCACTGGAAAGGATATCTTG
TGAGGAAGGAACCTGAAGTTCAAGAGTTGCGACAGTAccaaaaagaaatg
aaagagAGTTCGTATCACATTATGTTCAAAGTGGAAGAATTTTggaagca
acataaaattgaaGACCTCGACGAGGCTGAAGAAGTTATTGAAGATACTT
TAATCAAAACTGACTTTCTATAGATGGCAGAAGACGAATTAATGCAGCTA
CTTCAAGTTGATCTCACTGCTATTGAGTTGGATGCCAAAAATCTTCATCC
taaaaaatgCAGTGCACGCCAATATGTTGAGACATTTATCTTCCCAACCT
TGCTCCCTGGGTTGAACGATTTGTTTCAAGCAGCAAAAGACAATCTTGTG
TTTGAAAAAAGAAGGACGAAATTCAACGCATGTGACTTTCTTACTGAGTA
CCTTTACAACAATAATCCAACACCGAAAGATCGTGAGAAGCAAGGCTTAT
GGGATATCCCCTTCGTCAAAGAAATCAACGGAAGAAACCCTCGACCTCCC
ATTCCACTTTCATTGATATGGACAGAGGCTGAAGCAGCTTTAGTCATACA
ATCTCACTGGAAAGGATATCTTGTGAGGAAGGAACCTGAAGTTCAAGAGT
TGCGACAGTAccaaaaagaaatgaaagagAGTTCGTATCACATTATGTTC
AAAGTGGAAGAATTTTggaagcaacataaaattgaaGACCTCGACGAGGC
TGAAGAAGTTATTGAAGATACTTTAATCAAAACTGACTTTCTATAGATGG
CAGAAGACGAATTAATGCAGCTACTTCAAGTTGATCTCACTGCTATTGAG
TTGGATGCCAAAAATCTTCATCCtaaaaaatgCAGTGCACGCCAATATGT
TGAGACATTTATCTTCCCAACCTTGCTCCCTGGGTTGAACGATTTGTTTC
AAGCAGCAAAAGACAATCTTGTGTTTGAAAAAAGAAGGACGAAATTCAAC
GCATGTGACTTTCTTACTGAGTACCTTTACAACAATAATCCAACACCGAA
AGATCGTGAGAAGCAAGGCTTATGGGATATCCCCTTCGTCAAAGAAATCA
ACGGAAGAAACCCTCGACCTCCCATTCCACTTTCATTGATATGGACAGAG
GCTGAAGCAGCTTTAGTCATACAATCTCACTGGAAAGGATATCTTGTGAG
GAAGGAACCTGAAGTTCAAGAGTTGCGACAGTAccaaaaagaaatgaaag
agAGTTCGTATCACATTATGTTCAAAGTGGAAGAATTTTggaagcaacat
aaaattgaaGACCTCGACGAGGCTGAAGAAGTTATTGAAGATACTTTAAT
CAAAACTGACTTTCTATAGATGGCAGAAGACGAATTAATGCAGCTACTTC
AAGTTGATCTCACTGCTATTGAGTTGGATGCCAAAAATCTTCATCCtaaa
aaatgCAGTGCACGCCAATATGTTGAGACATTTATCTTCCCAACCTTGCT
CCCTGGGTTGAACGATTTGTTTCAAGCAGCAAAAGACAATCTTGTGTTTG
AAAAAAGAAGGACGAAATTCAACGCATGTGACTTTCTTACTGAGTACCTT
TACAACAATAATCCAACACCGAAAGATCGTGAGAAGCAAGGCTTATGGGA
TATCCCCTTCGTCAAAGAAATCAACGGAAGAAACCCTCGACCTCCCATTC
CACTTTCATTGATATGGACAGAGGCTGAAGCAGCTTTAGTCATACAATCT
CACTGGAAAGGATATCTTGTGAGGAAGGAACCTGAAGTTCAAGAGTTGCG
ACAGTAccaaaaagaaatgaaagagAGTTCGTATCACATTATGTTCAAAG
TGGAAGAATTTTggaagcaacataaaattgaaGACCTCGACGAGGCTGAA
GAAGTTATTGAAGATACTTTAATCAAAACTGACTTTCTATAGATGGCAGA
AGACGAATTAATGCAGCTACTTCAAGTTGATCTCACTGCTATTGAGTTGG
ATGCCAAAAATCTTCATCCtaaaaaatgCAGTGCACGCCAATATGTTGAG
ACATTTATCTTCCCAACCTTGCTCCCTGGGTTGAACGATTTGTTTCAAGC
AGCAAAAGACAATCTTGTGTTTGAAAAAAGAAGGACGAAATTCAACGCAT
GTGACTTTCTTACTGAGTACCTTTACAACAATAATCCAACACCGAAAGAT
CGTGAGAAGCAAGGCTTATGGGATATCCCCTTCGTCAAAGAAATCAACGG
AAGAAACCCTCGACCTCCCATTCCACTTTCATTGATATGGACAGAGGCTG
AAGCAGCTTTAGTCATACAATCTCACTGGAAAGGATATCTTGTGAGGAAG
GAACCTGAAGTTCAAGAGTTGCGACAGTAccaaaaagaaatgaaagagAG
TTCGTATCACATTATGTTCAAAGTGGAAGAATTTTggaagcaacataaaa
ttgaaGACCTCGACGAGGCTGAAGAAGTTATTGAAGATACTTTAATCAAA
ACTGACTTTCTATAGATGGCAGAAGACGAATTAATGCAGCTACTTCAAGT
TGATCTCACTGCTATTGAGTTGGATGCCAAAAATCTTCATCCtaaaaaat
gCAGTGCACGCCAATATGTTGAGACATTTATCTTCCCAACCTTGCTCCCT
GGGTTGAACGATTTGTTTCAAGCAGCAAAAGACAATCTTGTGTTTGAAAA
AAGAAGGACGAAATTCAACGCATGTGACTTTCTTACTGAGTACCTTTACA
ACAATAATCCAACACCGAAAGATCGTGAGAAGCAAGGCTTATGGGATATC
CCCTTCGTCAAAGAAATCAACGGAAGAAACCCTCGACCTCCCATTCCACT
TTCATTGATATGGACAGAGGCTGAAGCAGCTTTAGTCATACAATCTCACT
GGAAAGGATATCTTGTGAGGAAGGAACCTGAAGTTCAAGAGTTGCGACAG
TAccaaaaagaaatgaaagagAGTTCGTATCACATTATGTTCAAAGTGGA
AGAATTTTggaagcaacataaaattgaaGACCTCGACGAGGCTGAAGAAG
TTATTGAAGATACTTTAATCAAAACTGACTTTCTATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022568-exon-sc0000427-1491911889:231949..232228 | TCONS_00022568-exon-sc0000427-1491911889:231949..232228 | Clytia hemisphaerica | exon |
| TCONS_00022568-exon-sc0000427-1510915933:231949..232228 | TCONS_00022568-exon-sc0000427-1510915933:231949..232228 | Clytia hemisphaerica | exon |
| TCONS_00022568-exon-sc0000427-1575043694:231949..232228 | TCONS_00022568-exon-sc0000427-1575043694:231949..232228 | Clytia hemisphaerica | exon |
| TCONS_00022568-exon-sc0000427-1491911889:233182..233279 | TCONS_00022568-exon-sc0000427-1491911889:233182..233279 | Clytia hemisphaerica | exon |
| TCONS_00022568-exon-sc0000427-1510915933:233182..233279 | TCONS_00022568-exon-sc0000427-1510915933:233182..233279 | Clytia hemisphaerica | exon |
| TCONS_00022568-exon-sc0000427-1575043694:233182..233279 | TCONS_00022568-exon-sc0000427-1575043694:233182..233279 | Clytia hemisphaerica | exon |
| TCONS_00022568-exon-sc0000427-1491911889:234229..234281 | TCONS_00022568-exon-sc0000427-1491911889:234229..234281 | Clytia hemisphaerica | exon |
| TCONS_00022568-exon-sc0000427-1510915933:234229..234281 | TCONS_00022568-exon-sc0000427-1510915933:234229..234281 | Clytia hemisphaerica | exon |
| TCONS_00022568-exon-sc0000427-1575043694:234229..234281 | TCONS_00022568-exon-sc0000427-1575043694:234229..234281 | Clytia hemisphaerica | exon |
| TCONS_00022568-exon-sc0000427-1491911889:235241..235318 | TCONS_00022568-exon-sc0000427-1491911889:235241..235318 | Clytia hemisphaerica | exon |
| TCONS_00022568-exon-sc0000427-1510915933:235241..235318 | TCONS_00022568-exon-sc0000427-1510915933:235241..235318 | Clytia hemisphaerica | exon |
| TCONS_00022568-exon-sc0000427-1575043694:235241..235318 | TCONS_00022568-exon-sc0000427-1575043694:235241..235318 | Clytia hemisphaerica | exon |
| TCONS_00022568-exon-sc0000427-1491911889:235849..235990 | TCONS_00022568-exon-sc0000427-1491911889:235849..235990 | Clytia hemisphaerica | exon |
| TCONS_00022568-exon-sc0000427-1510915933:235849..235990 | TCONS_00022568-exon-sc0000427-1510915933:235849..235990 | Clytia hemisphaerica | exon |
| TCONS_00022568-exon-sc0000427-1575043694:235849..235990 | TCONS_00022568-exon-sc0000427-1575043694:235849..235990 | Clytia hemisphaerica | exon |
| TCONS_00022568-exon-sc0000427-1491911889:236684..237431 | TCONS_00022568-exon-sc0000427-1491911889:236684..237431 | Clytia hemisphaerica | exon |
| TCONS_00022568-exon-sc0000427-1510915933:236684..237431 | TCONS_00022568-exon-sc0000427-1510915933:236684..237431 | Clytia hemisphaerica | exon |
| TCONS_00022568-exon-sc0000427-1575043694:236684..237431 | TCONS_00022568-exon-sc0000427-1575043694:236684..237431 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000427 | supercontig | sc0000427:231949..237431 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000048 | IQ_motif_EF-hand-BS |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00022568 vs. Swiss-Prot (Human)
Match: IQCK (IQ domain-containing protein K OS=Homo sapiens GN=IQCK PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 3.298e-44 Identity = 77/145 (53.10%), Postives = 104/145 (71.72%), Query Frame = 1
Query: 256 AKNLHPKKCSARQYVETFIFPTLLPGLNDLFQAAKDNLVFEKRRTKFNACDFLTEYLYNNNPTPKDREKQGLWDIPFVKEINGRNPRPPIPLSLIWTEAEAALVIQSHWKGYLVRKEPEVQELRQYQKEMKESSYHIMFKVEEFW 690
++ ++PK CS ++Y+ETFIFP LLPG+ L AK FE++RTKF ACDFLTE+LYN NP + IPFV+E ++PRPPIPLSL+ TE EAAL IQS W+ +VR +PE+QELRQ+QK+++E+ HI +V+ FW
Sbjct: 118 SETINPKTCSPKEYLETFIFPVLLPGMASLLHQAKKEKCFERKRTKFIACDFLTEWLYNQNPKRAGEPFTEFFSIPFVEERLKQHPRPPIPLSLLLTEEEAALYIQSFWRACVVRCDPEIQELRQWQKKLREAK-HIHQQVKIFW 261
The following BLAST results are available for this feature:
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