TCONS_00022643 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022643
Unique NameTCONS_00022643
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4373

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022643 ID=TCONS_00022643|Name=TCONS_00022643|organism=Clytia hemisphaerica|type=transcript|length=4373bp
gtaaaaacaaaaatatgaatATTATGATGGTATTATAAAATAATGTCATG
GCTCTTTCTGCAAGTGCTCAAACATTTTTTCCAAAGAATGACTCCAAGTC
TGAAAATAAACCTAAAGAAAAAGCTCCATTGAAGAGTTCACTATCCGTTG
ATGTTCCTGAATTTGTCCCTAATACTGAAAAAAACATCCAGCCAAAAGAA
GGAAACCGAgaagtaaacaaaaatataatcaagaaacaaatttccaaaaa
ggaCTCTAATCGAATTGCTAACAGAAATGAtggaaatgaaaagaaaacac
aaaaccAAAGGAACATTTTGGAAAAACAATCATTCAACCCAAGACATGAT
ATCAATTGGGCCCAATCTAAGGATATTAAAGAAATGAGTGACCTTTTTAG
TGCGCGTCATGATAAAAACTGGTTCAACCATATCCCCGCTAAATCCAAGC
AAAAGGACAGTTTACGAAAATCCGACTCAGTTAATGTTTATGCCAGCGAG
AATAAGGATAACCATCACAAAGAATTGTTACAAACTTATTCTATTGGTGT
ATCAGCACAATCAAAGAAGCGTGTTCAAAATAAGaaatCAGCAACAGGAG
ACGatTTGAATAACATTCCATCAACATCATGGAGCTCTATTGTCAAAACC
GCACCTCAAAAGAAAACACAAAGCCTAGATCGCCGATCAAGTTTGACTCC
AAACACTGGACATAGTCAAGATTTCCGTACCAAGACTTACGATGTTGAAC
GTGATAAGAGGAACAAGTTAAACAAACTAAAGAAAACAAATAGTTTATTA
GGAGCACTTGGAGATCCTGTGATAACAAATCCATCAGTTAAAGCTAAAAG
CTTGCCAAAAAGATTAACACATACTCATTTAACGGAAAGTAGAAGTGTTG
GTTCTAATGATATTGCTTTGAGACAAGCACGGCCACGTcttgaaatcaaa
agaaaatcgcTGGTGTTGAAAGCTAAGAAAAGTGCTGGTTTGAAGCAAAA
CCCTGAAATGGATAATTGGTTTACGCAAGATGTACCAGCTAAGATTGAAC
TGTTTAGTACACTAACAAAGTTGAGCCCTGATGATGAAAAACCACCCGAA
TCACCAAAACCAAGTACAACACCAACTGAGAAAAGAAAGTTAACAAGAAC
TACTAAGAAAGTATTTTCACCATCTTTAAAAGTGACAGACTTTACAGACA
AGATTGTTTCAACAAAACATGACATAACTGATGACTACTTCTCTAATGAC
AAATACAAGAATCTTCCAAAACAAGACACTACTAAAGATACTCTAGAGCT
ATCTATTAAGAAACCTTTGGGAAATGATTTCAATAGGCCTGCAGTGGTTT
CTTATAGTGCAATGTTGAAGAAGAACTCAGCTGGACCACCTGTTACTTCA
AAGCCACCAGAAAAAGAGGAGAAACTGCTAACTTCCGAAGAAATTCGTTT
aatgaaaaaagcaaagaaaaaggagaagaaaaaaatgaaaaagcaaaAAC
GGATAGCGGAGAGCCAAAGTCAACAAGATAAGGGAAACCATGATGATGGT
GCAGCAGTACAAGATAAAACGAAGAATAAATCTAAACAAAATATGACAAT
TGACATTAGTGATATGGTGGACAAGCTTTTCCTTGCAGCACCAAAAACGA
AGAGTAATAAATCCAGTAGAAGCAAGTCTAAACCGAAGAAGGTTACAGTA
TCTACAGGAGTGGTATCTGTGGTATCTGGTCTTgccaagaaaaataaaca
tgatGGGAAGCGGACAACAAGGAATAAGTATGGTGGCACAGGCATTATTA
TGGATGGTGCGACTGCAATCGTCAAGCGTGGAAAAGAACGAGAAACTCCG
AAACGTAAAAAACCAACACTACTTAAGAAGGAATAACAACAATGCAAATA
GTGGAAAAAGCCCTTCTgaggaaaaagaaaacacaaataAAGAGACATCA
ATTATAGAAGTGATATCAACGGAAACGAAAGAGATCAAATGTTGTGCTCC
TCTTACCAAACTTCCTGAAGAATATTGGAAGCAGTTacattccagaaaat
ttcgagAGTATTGTGACCATATGGCGACTAAAGAAATCAATGACCTGACA
TACCAGCTGTTAACGACACTTTTAAGGTTTCAAGATCGTGTATACCATGA
AAATCCCACCAAGtTTCGACAAAAAAGACGTTTTGTTCTTGGTTTACGAG
AAGTTTTGAAACACACGAAGTTACGACGTATTAAGGCTGTTATTGTGGCT
CCAAACCTTGAGAAAATCTCCAGTGAAGgtGGCTTGGACGATTACCTTCG
TTCGATTTTATTGTTGTGTGATCAAGATGAGATCCCGAAAATTTTCGCTA
TGAGCCGCCACGGTCTTGGCAAAACGTTAAAGAAGAAAGCTCCAGTCAGT
GTAATTGGCATTTTCAACTACGATGGAGCTCAGGACACATACAAAGAACT
AATAAACCATGTTGAAAATGCTAAGAAATTATATTCTGATAAAGTGCATG
CCATATTAACACAAAAGAACACATCAAAAACAGCATCTCAAAAACAAACG
AAGCCAAAGGATGTTGGCATTAACATATCCAGTAATTCTTCTCCTTCTCA
AAGCTCTGAATCAAATCACCGCTCTCACCAGTCACCAAGGTTACAAAACA
ATCATCACAATGAGGTTGAAATGTTGAGTCATCAGATACTGACTAAACTT
TCGGAACCGTAGCGCTACCAAATGAAAATGACTGGTTATTATTGTGAATG
AAGTTTGATCGAATCGAATTGAAGTTGTACTAATTATAGAccttttattg
cattttttgaAGTGCTGGGAAAGCTGTTCCTCTCATCTTCCTGGTAGCAA
AGAGAACGTATCTGGTGCGTATAATATCTGAATTTATGGATTGCTCTCAA
TATTGTTTTCTTCTTATCTATCTTGGGAATTTGTGATAGAGTTGTCAAag
catattttcaaaatgctATCGGACGAACTCATTTAGGTCGATGTTCGTTA
AGCCAATGATTGGGCTCTTTTTGGCTCGTCTCCTTCAATAAAAGCAGGTA
AATGGAATTTTTTGTATATTCTTCCAattaattttaaacttttattaaaa
ttttgcctCATTTTTAACAcctattttattttgaatagaatttttatatt
gaattttacttttcacgattttgccttattttttcATATAGTAttattca
aaatcaattttgaattttttatttgtgTTTCAATTTTGTGTACGCAGTAg
atgtgttttgtttttatcttagtTGGGTCCTATTCATCTTGAATTAATGT
CGTTGTAGATAAATGTTATAAACGATGAATGATAAATCCCTGAGTCTAAA
GTGGAACCATATACATTGCCAGGGTGTCtgcgggaccttgaaaaccttga
aactGGACTaagcaaccttgaaaaccttgaaagtgAATGTAATGTGAAAG
aattccttgaaaaccttgaaaaagctTGATTGTCACAGTATAGTTGTCTT
GTTTTGGCTTAGGTCCTCACTGAAGTTTTGGTCCATGCTAAAActccaaa
aaaatttcttgctcGCATCGCTCGCAATCATTTTTTATGGACCACTACTG
GTAATAGTCTCTCACGCACCTCGTCAAGAACGGTGATATCGTACTATTTA
AATCAATTTGACTTctaaaaaaccttgaaaattcgctaaaatattgccaa
aaaaaacttgaaaaccttgaaaatggtgaaaaaaattccgtagacaccct
gattccagtcttcataactcgaacctctataactggaATGTCTCCTTAAA
AGTGAAACCATATACCTACGTTGcagtcttcataactcgaatgtctcctt
aactcgaacaagttttgtggtcccttcagttaacaattttctttaaaccg
gtctccgtaactcgaaatttccataattcgaacaaatttcgtgcgtgttc
gagttataggccatttcactgtcgcaaagcgtaatcaggaccactgcgcg
ctaatgacgacttactattggtccaaagttttgataaatctaATCAACCA
GAAGTCGTTACTGTAGAGCGCAACctgtcctgattacccatgatttaTTC
TCGACTGTGAAATAACATAGTAAGACTCCACAGTAGTTAAAGccattaaa
aaaatcttaacaTTGGTACAAGATCATACGCCGTATGAATGCTGAATACT
TGAAAATATGGTTCAAAATTACCAGtggtaaaatattaaaaaaatatatg
gtGTTTGGTTTAAAGGAATGTTTACGAAAATTTAGATGTAGATATTAtat
taatttgttttttaagaatttgTAATTATATTGCCGTACTAGTAAATGTG
TTTGAGTAACACTAAGAATATAC
Run BLAST on NCBI

transcript from alignment at sc0000429:234170..245875-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022643 ID=TCONS_00022643|Name=TCONS_00022643|organism=Clytia hemisphaerica|type=transcript|length=11706bp|location=Sequence derived from alignment at sc0000429:234170..245875- (Clytia hemisphaerica)
GTAAAAACAAAAATATGAATATTATGATGGTATTATAAAATAATGTCATG
GCTCTTTCTGCAAGTGCTCAAACATTTTTTCCAAAGAATGACTCCAAGTC
TGAAAATAAACCTAAAGAAAAAGCTCCATTGAAGAGTTCACTATCCGTTG
ATGTTCCTGAATTTGTCCCTAATACTGAAAAAAACATCCAGCCAAAAGAA
GGAAACCGAGAAGTAAACAAAAATATAATCAAGAAACAAATTTCCAAAAA
GGACTCTAATCGAATTGCTAACAGAAATGATGGAAATGAAAAGAAAACAC
AAAACCAAAGGAACATTTTGGAAAAACAATCATTCAACCCAAGACATGAT
ATCAATTGGGCCCAATCTAAGGATATTAAAGAAATGAGTGACCTTTTTAG
TGCGCGTCATGATAAAAACTGGTTCAACCATATCCCCGCTAAATCCAAGC
AAAAGGACAGTTTACGAAAATCCGACTCAGTTAATGTTTATGCCAGCGAG
AATAAGGATAACCATCACAAAGAATTGTTACAAACTTATTCTATTGGTGT
ATCAGCACAATCAAAGAAGCGTGTTCAAAATAAGGTTAGTTGTTGATCTT
TTTAGGATGATTTTCAAATGATGTTAGGAATATTTTGAATTTTTTCTAAA
ATGTTAAAGAGACTATTATATTTTGTACTGGTATTATCAGATCTTAATAT
TCCTAACTTGTTTGTATTTCTATTTTTTTTTTATTGTTTTTATTATTTTC
TATTGTTTCAGAAATCAGCAACAGGAGACGGTAAGTGAATTTTAAAATTT
CCATAGGTGATCATACTTATTCATTATTGGTGGTCTTAGATCTTCAGTGC
TCATATATGAGGACTCTAAAATAAAATATTAATGAAATTTACAGGAAGCA
ATGAAGGGCTTTGAAATAAACTCTTAAAGATTTGCTATAGATTATGTGTT
GCGAGAATCAACAATAGTTAGTGATGGTTTACTGCTAGGTAGCTCTTTTT
TTGTAAGTTCATTATTATGGCTTAGTCTTTAGGCTATTATCTTTGTAACT
CTAATTAACAGTTGCCAGCAATTAAAACTACCTTATTACACAAGTATTAC
TAGTCATTTTACTAACACGAATTGAAAAATTTTGTGTTAATAAAAACCCC
CTCTATTAAAACCAGCCACTGTTTCCTTGAATAAGCAGAAAAATTTGTGT
TAATTTCAGATTGTGCAAATTTCAAGGCCATTAAATACTTGCCTAGTAAT
GTTTGTGTAATAAGGTAGTTGGTTTTTCTAAAGTGCCCAAAACAAAAACC
TTATTATTAAGTACTGATAATATTTTTTTTTTTGCTCTAGATTTGAATAA
CATTCCATCAACATCATGGAGCTCTATTGTCAAAACCGCACCTCAAAAGA
AAACACAAAGCCTAGATCGCCGATCAAGTTTGACTCCAAACACTGGACAT
AGTCAAGATTTCCGTACCAAGACTTACGATGTTGAACGTGATAAGAGGAA
CAAGTTAAACAAACTAAAGAAAACAAATAGTTTATTAGGAGCACTTGGAG
ATCCTGTGATAACAAATCCATCAGTTAAAGCTAAAAGCTTGCCAAAAAGA
TTAACACATACTCATTTAACGGAAAGTAGAAGTGTTGGTTCTAATGATAT
TGCTTTGAGACAAGCACGGCCACGTCTTGAAATCAAAAGAAAATCGCTGG
TGTTGAAAGCTAAGAAAAGTGCTGGTTTGAAGCAAAACCCTGAAATGGAT
AATTGGTTTACGCAAGATGTACCAGCTAAGATTGAACTGTTTAGTACACT
AACAAAGTTGAGCCCTGATGATGAAAAACCACCCGAATCACCAAAACCAA
GTACAACACCAACTGAGAAAAGAAAGTTAACAAGAACTACTAAGAAAGTA
TTTTCACCATCTTTAAAAGTGACAGACTTTACAGACAAGATTGTTTCAAC
AAAACATGACATAACTGATGACTACTTCTCTAATGACAAATACAAGAATC
TTCCAAAACAAGACACTACTAAAGATACTCTAGAGCTATCTATTAAGAAA
CCTTTGGGAAATGATTTCAATAGGCCTGCAGTGGTTTCTTATAGTGCAAT
GTTGAAGAAGAACTCAGCTGGACCACCTGTTACTTCAAAGGTAATTTTTT
GATGCATGTTTACTAACTGCAGAATGATTGAAAAGATATATCATAAATAG
CATTATTAATATTTCTGCCCTTAAGCAAAATGCATGATATTTGATTGAAA
GTCATTCAGTTACTTTTGAATCTACATTAATGATTCTGCTCCTAAGTGAA
ATGCATGACATTTGCTTGGAGGTTGTCCAGTAATTTTTTGTTAGATCTAC
ACTCGCTATTATTATACTGTACATCAGTCAGCAGATCGTTTCAGTGGCAA
AACATTAGCCTCCTTTTCTTTTCATAGCCACCAGAAAAAGAGGAGAAACT
GCTAACTTCCGAAGAAATTCGTTTAATGAAAAAAGCAAAGAAAAAGGAGA
AGAAAAAAATGAAAAAGCAAAAACGGATAGCGGAGAGCCAAAGTCAACAA
GATAAGGTGAGATTACTGATAAATTTTGAGATTCTCTTTACATTCATACA
AGATTTTGATGTGAATTTAATGTATCTTTTACCATTTGTAAACAGAGCAC
TTTTAAACAAAAGAAAGAGTAACTCCCCCCCCCCTTTCTGCGCCGCACAA
TCATATATTTAGAGAAACTCTTTGTTAATTCAGCATTGTCAGCATATGAG
ACGCCTCTTTTTCTATATCATAAAAAATAATTACACATTTGTTTGTTTGT
TTTTTAACCCTTTAACGACCAATGACGAGATATGTCGTCATCGTGTTCCG
TGCCAAAAATACTGATGCCGAGGTAACTCGTCATTGCGTTCCGTGCCAAA
AATACTGATGCCGAGGTAACTCGTCATTGCGTTCCGTGCCAAAAATACTG
ATGCCGAGGTATATTGTCATCGCGTTCCATGCCAAAAATACTGATGACGA
GAAATCTCGTATGCGCATTATGTTCCAAGTATACCGAAGAATTAAAATTT
TCCAGCAAATCCAGCTTCCAAAACAAAATTCGAAACTTGCAAAAAAAGTT
ATTGTTTATTTCGACCATGCTGATATAAGTCTTTTTTATAATTCCTGACA
ATTTTCTCTATGTAATTTTCTCTTGTAACTTTTTAGTTGTGTACTTCTCT
TTTTTGTAGTCATATACAAAAAATTTAAATATCATATATGGAAAAAAGAA
GTACAAACAATCAGAAAATGAAAAAATATTAATAGAAAGTCATTATAATG
ATGAATTTTTCCCAAATTCCATGTTTTATTATTGGCGAGTTATATCGTCT
CGCAGTCGTGAACCCCTAAAGTACTTTTTGCCGAGTTAATTTGTCATTCA
ATCCTTTTGGCACGGGTTGTAAAAAAGTCGTGGTATTTTACCAACCACCT
CAAAAGAAAGGCTCGGTATTAAGAACAGTCAGTTCAAAAAGCCGCGGTAT
TTTAGGCACGGAAAAATAAAATAAAGCAGTCGTTAAGGGTTAAGAAACTA
GTTTTACCAAGCAGCCTCAATGTTTCTTAAGAAATCTGCCTTTTGAGCTT
TAAGCGTTTCTTACATGTTTCTAAACTTTGTCAAGCTTAAAGGACGCATG
TTGATAATACAATAGTCTAATATACTAATCTGCGGTACTTTCTTATCTTC
TATATTGATTTTCTGACTTTCTCAAGTGTTTCTAACTGTTATGTAAGTAT
TTTTTGTTTCTTAGTTTTAGGCATTCTAAGCCTCATGTTTCTTAAACGTG
TCTTTCTTAAAAAAACAACGTGTATGTATCAGTTTAGACTTCTTTTGTTA
TGTTCAGGGAAACCATGATGATGGTGCAGCAGTACAAGATAAAACGAAGA
ATAAATCTAAACAAAATATGACAATTGACATTAGTGATATGGTGGACAAG
CTTTTCCTTGCAGCAGTGAGTATTTCAAGTATCAACAGTTTGTTCACACT
TTTTGTGTCTCAGAAGATAGAAGGCATTGGGAAAGGCATACCTTATTACA
CAAATATTACTTGTCACTTTATTAACACGAATTGAAAAATTTTGTGTTGA
TAAAAACCCCCTTAATTTAAAACCAGCCGTGGTGTCCTTGAAAAAGCTAA
TAAAATTTGTGTTAATTTCAAGGTCGTTGAATACTTGCCTAGTAATATAA
TATTCGTGTAATAAGGTAACTTTAATTTAATTTAAACTCAAATTTTACAA
GAGGTCATAGAAATGAAACAAGTGACAACCAGTTGTTCTCGCCATGTTTA
CCAAGTTTATCATTCTAAATCTGGAATCTGAGCTTTACTAAGCTTTACAA
ACACAATGGACTGGAATCCCAAGGTCTTTCAGACAGAGTTGCTAGGAAAG
CATGGTGATAGACTCTCTACCTTCACTGTTCTCACAATGTTGAGTTTTTC
TACTGGTTTCAAATTTGATATTACAATCTTTTTTAATAGCCAAAAACGAA
GAGTAATAAATCCAGTAGAAGCAAGTCTAAACCGAAGAAGGTTACAGTAT
CTACAGGAGTGGTATCTGTGGTATCTGGTCTTGCCAAGAAAAATAAACAT
GATGGGAAGCGGACAACAAGGAATAAGGTTTCTATCAGTTTCTTTTTATT
TATTTATTCGTACCTACCTTAAGAGAAAAACCTTAATTCGAGAAAAAATT
AATGCGGTATGAATCAATGCAGAATTAATGCAAATTTAATTCCGAAAACT
TGAAATTTTCAGCTGTTTGCAAATTCCACTTAATTTTGTCTTGCATTAAT
TTATTCCCTTAAGGGACGCACTGAAAATTTTTGGATTTAGTTCGGCACAA
AAATTTGTATGCTTAGGTTTTATTTTTTATTTTTGAGACATATTGCATAT
GCTTTTTTGACAGAGTAGGCTAAGACTAATCCTCTAAGTATGAGGATTTT
TAGGCAATAAAGATTAACACATATTTTTTAACAAACAGTATGGTGGCACA
GGCATTATTATGGATGGTGCGACTGCAATCGTCAAGCGTGGAAAAGAACG
AGAAACTCCGAAACGTAAAAAACCAACACTACTTAAGAAGGTATTTTCGA
GCTTGTTTTTTATATTTTGCTAAGTTTACAAGAAAAAGCCTGAAATAAGA
TCAAATAAACATTGCGAAAGATCACTATTTGCGTCAAAATTTTCAGCCCC
TAAGGTCAGCCTAAAAAACAATTCACTTATTTAATGCTCCATCAGTAGAA
TAATATTAGTCTGTATAGTAAGAGTCACTGACCCTTAGTGATTTACTATT
TATCCTGTTCAGAGGCAATTTCCTAAAATATTTCTATTCAGCCGTATTTT
CAAGGGAAAATGTTCTTTTGTATTTAGAGAAAATTCAGTTCCTGTATTTT
TGAAGGAAAATGGGTTTTTATTATGATATACACGTTTTCGTTTTATAAGA
AGCTAAACTTAGCTCAAAACCCGAATATTCCTTATTTTTTCAGAGAATTT
CAGCCTTGAAATTCCTCAGTGAAATTCTGTTGGTNTTAGGCTTAAAAATA
ATTCAGCTATCCAATACCCAATCAGTAGAAAGATATTAGCAAGTGAAATT
CTGTTGGTTGGAAGTTCTTTTTTCTCATATTCCTTTGTATATTCTGTACA
GATCATACAAGCTGAGCGAGAACGTAAACGACAAATCCTTCTGAAAGCAA
CAAAGGAAAACGAAGCTAATGAAGAAGAACAAAAAAACGTGGATGATGAT
AAAGATGATGATTCAGAAGAAAAGGCATCTAAAGGAACAGAAAAGGAAAG
AGTGTAAGATGGATCAAATATCTTGATAATGACCTAAGTTAGATCTACAA
AAAATAAATGATATATATTACATTAGGCTCCAAGGAGGTCTGTCTATCTT
TGCTATTGTCATCCAAAAAAACCTGTATCAATCAAAACGATTAAGTATAT
TAAAGGAAGAAATTTTGGTGGGAATTTAATTTGGTAAATGGCCGAAAAAG
TTTTTTCAGAGGGAATTTAAATTGGCGGTTAACTTGAAAAATTAAATTTG
GTGGGAATTTGATTTGGCGGATGAAGGACATTTTTGTCCAAAAAACGCCA
TTAAACGAGAAAAAATCTGTCATAAAGCCTGAAATAGCACACATTTGGGG
GAATAAATAGAGCAATTTAAATTTGGCGGGAATTTAATTTGGCGGATAAC
TTAATTTGTCGGATTTTGACCAAATCCGCCAAATTAAGTTCCTGCCAAAA
TTTCTTCCTAGTTAATGTAGATGAAAATATAGTTCTTATAACATCCAAAG
TATTTGAAATCTGCGATATCTCGTAATTAGCCTGGACTGTCCTTTTATAA
GAAGACACAAGTAACCATAAATAGAATGATGCATTCTAATGATCTTTTTT
GTTCATGTTTCAGGAATAACAACAATGCAAATAGTGGAAAAAGCCCTTCT
GAGGAAAAAGAAAACACAAATAAAGGTATGAACTTATCACACAATAGTTT
AAATTTGATAGTTCTGTCAAATATTCAAGTTTTTGTCCTTTTTTTAAATC
TTGCTTTTGACCTGTGAAACTATGAACGTGTCAATGCAATGACTTTAATG
ACGTCATTACATCCTAAAAATCTTGAGCCCAATTCATCGGGACAAGCTGG
AGTTTTTACAAGCTCTTATTTAATTTGGTTCGTCGTTAAGATGTAATAAA
AGAATCTTATTACTTTTTCTAAAGAACGCGTCATCTCTATCACTTTAAAT
GACCAATTAGTGAAGTATCTTGTAAAAACTCCAACGCATCCCAATTCATC
TTATGCAGCTTTCGACTAAAGGATTGATGCATGTATTATGTCACGTGACT
TGAAGTTTATGTTGATTTTTTCTATTTCTTTTCTTACAGAGACATCAATT
ATAGAAGTGATATCAACGGAAACGAAAGAGATCAAATGTTGTGCTCCTCT
TACCAAACTTCCTGAAGAATATTGGAAGCAGTTACATTCCAGAAAATTTC
GAGAGTAATTTGAACATTTTGCTTACGCTTAAAATTTCAATTATTAGCTT
TCAAAGTCTGCACACTTTGGAAAAATTTTACTAACTAACCTTGTTAATTA
CCTATTAATTCTTGATATTCATGATGTAATGTTTTATACGGATCCACCCA
ACATAGATCGGTAGTTTGTCACTAGTTTTATTGTTTAAATTCAAAACAAG
TGCCAGACACTTGGTATTTTTTGGATGTTTTCACATAAAAGTCTCTATTC
CTCATCACTAATATTTAAGGCTTTTTTCCTTCTTCAAATTCAGGTATTGT
GACCATATGGCGACTAAAGAAATCAATGACCTGACATACCAGCTGTTAAC
GACACTTTTAAGGTTTCAAGATCGTGTATACCATGAAAATCCCACCAAGG
TTTGTCTACTTCAAATAAGAAGGGTTCGTACCTTTCTTCATCTCTGGATG
TCCTTTTTAAAATTTGGGGGTTGAGGCTCTCATTATGCTGGTGTCAAACT
TGAAGTAAAAGGAAATAAAGTTTTCTTTTCTTCGCAATCCATTTATTTAT
TGTTACGAATTGATTTCTCTCTGTCAAATAGATCCTCATCTTCACGATTG
AAATAATCTATTCGCATTCCGAATTTAACACATCTCCTGCCATTTGCTTA
CACATCATTTTAAACAAAAGAATGAACAACTTACTCCACTTTCGAACCCA
AATCTTGAGAAATTCCGTCGTTAATTCTGCTTTGTCAGCATAGAGGCGCG
TCTCCTTTCTATCATAACAAATTATCTTTAATTTTGTTACTTTTAGTTTC
GACAAAAAAGACGTTTTGTTCTTGGTTTACGAGAAGTTTTGAAACACACG
AAGTTACGACGTATTAAGGCTGTTATTGTGGCTCCAAACCTTGAGAAAAT
CTCCAGTGAAGGTTTGTACTTCTTTAAAAGATACAAAAACTTTGCGAGTA
AAGAAAGTTTTTCTTCGTTGGAAGATTGGGAGGTTTTGTGAATTTGTAAT
TTTATCTACAAGCTTGAAATGTGTTTTCAAACCCCCGTAAATATTATTCC
CGTCTTTGTGTTTTTGTGTTTTCGGAACTTGATTAGCTTGATTAGTAAGT
TTTATACGAGAGATCTTTAAATTTGAATGGCCAAAGGTTAATACAGTCGT
TGGATTTCTAAACCTTTAAGTTAAAAAGTCTAATGCAGTCTGATACCGAA
TAAATGGTTGTTGGTTGGTTGTTGCTTTGTTCAATTTTCCACTCAACTGA
AGGCCGAAATTTTCTTCAAAATGAATTATGGGGATAATCAACACTGAAGC
CATGCTTCCCTCCAAATCAGTGAGAACAAAGGTTTTCAAGGTTCTTTCAT
CTCAGACAGGCTCAAAAATTGGCTGTTCTGCCTTAGAATTTTATAAGATT
CAAAGATTCTTCACAAACTTAAGCGGCATAATTTATAAATCATTTTTCGG
AGAATTCTGAGGGGTCAACAGATCTCAAAGATCAAATTTTTCTGATGAAT
TAAAATTCAAGTCAAAGTAGAAACTGTTTTTAAGGAGAATTAAAAGTCTA
GTCAGTGGTTCTGAGAGAGCAGAATGCAATTTTGTATTTTTTAGAAAGGT
TTTTGGTCGCTATTAGGACCTATAGGCTACTAAACTACAGCTGAGTCTCT
ATAACTCGAACCCGCACAAAGAACGCAAATTTATTCGAGCTAAAGAAATT
TCGAGTTGTGAAGTAAGGTTTATATGGCATTGTTAATTAAAGATACGAGA
AAATTTGTTTTTTATTTCGATTTAAGGAGAAATTCGTATTATAGAGGTTC
GAGTTAAAGAGATTCTACTGTATTTTAAAAACAGAAAAATTTGGTTTGTT
TCAACAACTGGCTCTTCATTTCTATTTTTATTTTTTTGTAGGTGGCTTGG
ACGATTACCTTCGTTCGATTTTATTGTTGTGTGATCAAGATGAGATCCCG
AAAATTTTCGCTATGAGCCGCCACGGTCTTGGCAAAACGTTAAAGAAGAA
AGCTCCAGTCAGTGTAATTGGCATTTTCAACTACGATGGAGCTCAGGTAA
TTGAATCTTTTATTAACATTCCACCGTAAGTAGAAGCAGCCAGTAAGTTC
ATTTGTCTACATCCTGCCTGTTTTTTTCTGTCAGATGTAAATTGTAATTG
AAAGTCATTCATGTATGCTAATTTAGTTGGTTGATTTTCAAAATTCCACA
AGCAAACTCAGAAAAACCTTGGGTCGATATAATGACTTTCCCAAAATATG
TGAACTGTTGACAGACTTTCGTTCGATTTTTTGCTCGAAATTTGCTGTTT
TTTTTCTATACATTTGTGGGCGGACTAATTTTTTCNGTGTAATTGGTATT
TTCAACTACGATGGAGCTCAGGTAATTGAATCTTTATCCACTTATCCACA
GCCAGTAAGTTCTTTTGTCTACATCGGCTTGTTTTTTTTCTTCTAGATAT
AAATCTTTTAGATGTAAATTGTAAATGAAAGTTATTCATATATGCTAATT
TAGTCGGTTCATTTTTAAAGTTCCACAAGCAAACTCAGAAAAACCTTGGG
TCGATGGTCGATATAATGACTTTCCCAAAATATGTGAACTGTTGACAGAC
TTTGGTTCAATTTTTTACTCGAAATGTTTTGTTTTTTCTATACATTTGTG
GGCAGACTAATATTTTTTCAAATTCTTTCAGTCTGCATACCCCAATAAAG
ATGAAAAATAAACTTTCTTTTTCAGTTCTGCTCACCTTTTTTATTTCATC
TTTTTTAATTTTACAGGACACATACAAAGAACTAATAAACCATGTTGAAA
ATGCTAAGAAATTATATTCTGATAAAGTGCATGCCATATTAACACAAAAG
AACACATCAAAAACAGCATCTCAAAAACAAACGAAGCCAAAGGATGTTGG
CATTAACATATCCAGTAATTCTTCTCCTTCTCAAAGCTCTGAATCAAATC
ACCGCTCTCACCAGTCACCAAGGTTACAAAACAATCATCACAATGAGGTT
GAAATGTTGAGTCATCAGATACTGACTAAACTTTCGGAACCGTAGCGCTA
CCAAATGAAAATGACTGGTTATTATTGTGAATGAAGTTTGATCGAATCGA
ATTGAAGTTGTACTAATTATAGACCTTTTATTGCATTTTTTGAAGTGCTG
GGAAAGCTGTTCCTCTCATCTTCCTGGTAGCAAAGAGAACGTATCTGGTG
CGTATAATATCTGAATTTATGGATTGCTCTCAATATTGTTTTCTTCTTAT
CTATCTTGGGAATTTGTGATAGAGTTGTCAAAGCATATTTTCAAAATGCT
ATCGGACGAACTCATTTAGGTCGATGTTCGTTAAGCCAATGATTGGGCTC
TTTTTGGCTCGTCTCCTTCAATAAAAGCAGGTAAATGGAATTTTTTGTAT
ATTCTTCCAATTAATTTTAAACTTTTATTAAAATTTTGCCTCATTTTTAA
CACCTATTTTATTTTGAATAGAATTTTTATATTGAATTTTACTTTTCACG
ATTTTGCCTTATTTTTTCATATAGTATTATTCAAAATCAATTTTGAATTT
TTTATTTGTGTTTCAATTTTGTGTACGCAGTAGATGTGTTTTGTTTTTAT
CTTAGTTGGGTCCTATTCATCTTGAATTAATGTCGTTGTAGATAAATGTT
ATAAACGATGAATGATAAATCCCTGAGTCTAAAGTGGAACCATATACATT
GCCAGGGTGTCTGCGGGACCTTGAAAACCTTGAAACTGGACTAAGCAACC
TTGAAAACCTTGAAAGTGAATGTAATGTGAAAGAATTCCTTGAAAACCTT
GAAAAAGCTTGATTGTCACAGTATAGTTGTCTTGTTTTGGCTTAGGTCCT
CACTGAAGTTTTGGTCCATGCTAAAACTCCAAAAAAATTTCTTGCTCGCA
TCGCTCGCAATCATTTTTTATGGACCACTACTGGTAATAGTCTCTCACGC
ACCTCGTCAAGAACGGTGATATCGTACTATTTAAATCAATTTGACTTCTA
AAAAACCTTGAAAATTCGCTAAAATATTGCCAAAAAAAACTTGAAAACCT
TGAAAATGGTGAAAAAAATTCCGTAGACACCCTGATTCCAGTCTTCATAA
CTCGAACCTCTATAACTGGAATGTCTCCTTAAAAGTGAAACCATATACCT
ACGTTGCAGTCTTCATAACTCGAATGTCTCCTTAACTCGAACAAGTTTTG
TGGTCCCTTCAGTTAACAATTTTCTTTAAACCGGTCTCCGTAACTCGAAA
TTTCCATAATTCGAACAAATTTCGTGCGTGTTCGAGTTATAGGCCATTTC
ACTGTCGCAAAGCGTAATCAGGACCACTGCGCGCTAATGACGACTTACTA
TTGGTCCAAAGTTTTGATAAATCTAATCAACCAGAAGTCGTTACTGTAGA
GCGCAACCTGTCCTGATTACCCATGATTTATTCTCGACTGTGAAATAACA
TAGTAAGACTCCACAGTAGTTAAAGCCATTAAAAAAATCTTAACATTGGT
ACAAGATCATACGCCGTATGAATGCTGAATACTTGAAAATATGGTTCAAA
ATTACCAGTGGTAAAATATTAAAAAAATATATGGTGTTTGGTTTAAAGGA
ATGTTTACGAAAATTTAGATGTAGATATTATATTAATTTGTTTTTTAAGA
ATTTGTAATTATATTGCCGTACTAGTAAATGTGTTTGAGTAACACTAAGA
ATATAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012714XLOC_012714Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022643-exon-sc0000429-1575043694:245292..245875TCONS_00022643-exon-sc0000429-1575043694:245292..245875Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1575043694:245096..245114TCONS_00022643-exon-sc0000429-1575043694:245096..245114Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1575043694:243736..244535TCONS_00022643-exon-sc0000429-1575043694:243736..244535Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1575043694:243320..243448TCONS_00022643-exon-sc0000429-1575043694:243320..243448Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1575043694:241911..242018TCONS_00022643-exon-sc0000429-1575043694:241911..242018Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1575043694:241249..241386TCONS_00022643-exon-sc0000429-1575043694:241249..241386Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1575043694:240786..240887TCONS_00022643-exon-sc0000429-1575043694:240786..240887Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1575043694:239401..239462TCONS_00022643-exon-sc0000429-1575043694:239401..239462Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1575043694:238872..238986TCONS_00022643-exon-sc0000429-1575043694:238872..238986Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1575043694:238477..238582TCONS_00022643-exon-sc0000429-1575043694:238477..238582Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1575043694:237965..238079TCONS_00022643-exon-sc0000429-1575043694:237965..238079Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1575043694:236830..236984TCONS_00022643-exon-sc0000429-1575043694:236830..236984Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1575043694:234170..236109TCONS_00022643-exon-sc0000429-1575043694:234170..236109Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1510915933:245292..245875TCONS_00022643-exon-sc0000429-1510915933:245292..245875Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1510915933:245096..245114TCONS_00022643-exon-sc0000429-1510915933:245096..245114Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1510915933:243736..244535TCONS_00022643-exon-sc0000429-1510915933:243736..244535Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1510915933:243320..243448TCONS_00022643-exon-sc0000429-1510915933:243320..243448Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1510915933:241911..242018TCONS_00022643-exon-sc0000429-1510915933:241911..242018Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1510915933:241249..241386TCONS_00022643-exon-sc0000429-1510915933:241249..241386Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1510915933:240786..240887TCONS_00022643-exon-sc0000429-1510915933:240786..240887Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1510915933:239401..239462TCONS_00022643-exon-sc0000429-1510915933:239401..239462Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1510915933:238872..238986TCONS_00022643-exon-sc0000429-1510915933:238872..238986Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1510915933:238477..238582TCONS_00022643-exon-sc0000429-1510915933:238477..238582Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1510915933:237965..238079TCONS_00022643-exon-sc0000429-1510915933:237965..238079Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1510915933:236830..236984TCONS_00022643-exon-sc0000429-1510915933:236830..236984Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1510915933:234170..236109TCONS_00022643-exon-sc0000429-1510915933:234170..236109Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1491911889:245292..245875TCONS_00022643-exon-sc0000429-1491911889:245292..245875Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1491911889:245096..245114TCONS_00022643-exon-sc0000429-1491911889:245096..245114Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1491911889:243736..244535TCONS_00022643-exon-sc0000429-1491911889:243736..244535Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1491911889:243320..243448TCONS_00022643-exon-sc0000429-1491911889:243320..243448Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1491911889:241911..242018TCONS_00022643-exon-sc0000429-1491911889:241911..242018Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1491911889:241249..241386TCONS_00022643-exon-sc0000429-1491911889:241249..241386Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1491911889:240786..240887TCONS_00022643-exon-sc0000429-1491911889:240786..240887Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1491911889:239401..239462TCONS_00022643-exon-sc0000429-1491911889:239401..239462Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1491911889:238872..238986TCONS_00022643-exon-sc0000429-1491911889:238872..238986Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1491911889:238477..238582TCONS_00022643-exon-sc0000429-1491911889:238477..238582Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1491911889:237965..238079TCONS_00022643-exon-sc0000429-1491911889:237965..238079Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1491911889:236830..236984TCONS_00022643-exon-sc0000429-1491911889:236830..236984Clytia hemisphaericaexon
TCONS_00022643-exon-sc0000429-1491911889:234170..236109TCONS_00022643-exon-sc0000429-1491911889:234170..236109Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000429supercontigsc0000429:234170..245875 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.20003	0.433261	0.265186	0	0.989487	1.20891	0.766388	0.929091	0.748292	0.724933	1.66828	1.73609	1.43837	2.05295	1.0155	0.853731	1.71732	0.580909	0	1.43897	0.674033	1.34118	0.505441	0.218319	0.961558	0.333023	0.559117	0	0.358322	0.685476
Blast
[Close]
BLAST of TCONS_00022643 vs. Swiss-Prot (Human)
Match: SBP2L (Selenocysteine insertion sequence-binding protein 2-like OS=Homo sapiens GN=SECISBP2L PE=1 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 2.604e-42
Identity = 73/158 (46.20%), Postives = 111/158 (70.25%), Query Frame = 1 
Query: 2032 QLHSRKFREYCDHMATKEINDLTYQLLTTLLRFQDRVYHENPTKFRQKRRFVLGLREVLKHTKLRRIKAVIVAPNLEKISSEGGLDDYLRSILLLCDQDEIPKIFAMSRHGLGKTLKKKAPVSVIGIFNYDGAQDTYKELINHVENAKKLYSDKVHAI 2505
            ++HS++FREYC+ +  KEI++    LL  L+ FQ+R+Y ++P + + +RR V+GLREV KH KL +IK VI++PN EKI S+GGLD+ L +++ +  + EIP +FA+ R  LG+ + K  PVSV+GIFNY GA+  + +L+   E A+K Y D V A+
Sbjct:  668 KIHSKRFREYCNQVLCKEIDECVTLLLQELVSFQERIYQKDPVRAKARRRLVMGLREVTKHMKLNKIKCVIISPNCEKIQSKGGLDEALYNVIAMAREQEIPFVFALGRKALGRCVNKLVPVSVVGIFNYFGAESLFNKLVELTEEARKAYKDMVAAM 825
The following BLAST results are available for this feature:
BLAST of TCONS_00022643 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SBP2L2.604e-4246.20Selenocysteine insertion sequence-binding protein ... [more]
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