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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023483 ID=TCONS_00023483|Name=TCONS_00023483|organism=Clytia hemisphaerica|type=transcript|length=1216bp
ATTCCCGCATTAAGCATTACATTGAACATGCAAAATTTATAAACTTTTTC
GGAATTTAACAACGCCACAACGAGGTTAAAACTTTGAATCAGCCTGGATA
TTTCAAATAACGAGAGGATTTGGCTATACTTAgactacgtcatatcttcc
ttcgttgcGAGCGTTAAAATAAAAGCCTGGCCTAAAAGCCTGAGCTGTAG
ACTAGCCATACTGTGCTATTAACTTCTGACAGTAATAAATAAACTCGAAT
TAACTTATCAGTTGACGTCAATTTGTGGCAATATACACCGGAAATGAATG
CGGTTACTTGTACGAATGGAATCGAAAGACCACATTTTCATTTATCCGAA
AATGAATtcaacaaccaaaaacaaatttgatatTGCATACTTTCTGCTAA
AATGGATTTGGTTGTGACTCACCTTCTTTTAATCTTGTAGCCATTGGACA
GAGAGCATACATGCACACTCTTTTTAATCCAATGTTAGGAGACTGTATAA
ATTCGGAATCAATGAGTATTCttttcttgatatgcgtaagtcaagattac
gtcattttccatatcggaaacacccgaaacaGTGGAACTTGACCCCTAAG
TGTTACTACAAATTCCAGTTTTTCCGGGGGAGGAGTATTTGGGAAAAATG
AGTGCCGGGTATGGGCCATAAGGGCCCTTTTTCACACTCTCGAAAgtcct
caaaggggtacaaaaaccatcgaaaagcaattgagtctctgtaagggttc
ctAAATtactaaatataaaaaatcaattCGTCAAAGAGTCATTAATTCtc
gaaatttggactaaaatttgaaaattttggctgaaactttGGGGAAATAA
TTTCtctaagggtggcaaaaacgtcaaaaaatggatAAAACTTTCGAAAT
TCTCTTTAAGGGTCAATTTTCGAACTTTATGGATCTGACATACCCATCAT
CtcacaaacctagtacccctccCCGGGATTCTATGCGAAGCTTAGAattt
tttgcattcttttggACCAAGCAAAATTATGTATACTAATATTTCGTTAA
ACGACATTAAAAGCATAAATCAGTGTAAATGTAATGTAACTTGCCCTAAA
TCAAATACTTAGATTTATTAGATTTATTACTTGTTTAACTTTTCTCTTCA
ATTTTGTGATATTTTTGTctacttttgtaatttttgcttATAAACCTAGC
ACACTTTGGTAATGAT Run BLAST on NCBI transcript from alignment at sc0000454:171441..172656 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023483 ID=TCONS_00023483|Name=TCONS_00023483|organism=Clytia hemisphaerica|type=transcript|length=1216bp|location=Sequence derived from alignment at sc0000454:171441..172656 (Clytia hemisphaerica)
ATCATTACCAAAGTGTGCTAGGTTTATaagcaaaaattacaaaagtagAC
AAAAATATCACAAAATTGAAGAGAAAAGTTAAACAAGTAATAAATCTAAT
AAATCTAAGTATTTGATTTAGGGCAAGTTACATTACATTTACACTGATTT
ATGCTTTTAATGTCGTTTAACGAAATATTAGTATACATAATTTTGCTTGG
TccaaaagaatgcaaaaaatTCTAAGCTTCGCATAGAATCCCGGggaggg
gtactaggtttgtgaGATGATGGGTATGTCAGATCCATAAAGTTCGAAAA
TTGACCCTTAAAGAGAATTTCGAAAGTTTTatccattttttgacgttttt
gccacccttagaGAAATTATTTCCCCaaagtttcagccaaaattttcaaa
ttttagtccaaatttcgaGAATTAATGACTCTTTGACGaattgatttttt
atatttagtaATTTaggaacccttacagagactcaattgcttttcgatgg
tttttgtacccctttgaggacTTTCGAGAGTGTGAAAAAGGGCCCTTATG
GCCCATACCCGGCACTCATTTTTCCCAAATACTCCTCCCCCGGAAAAACT
GGAATTTGTAGTAACACTTAGGGGTCAAGTTCCACtgtttcgggtgtttc
cgatatggaaaatgacgtaatcttgacttacgcatatcaagaaaaGAATA
CTCATTGATTCCGAATTTATACAGTCTCCTAACATTGGATTAAAAAGAGT
GTGCATGTATGCTCTCTGTCCAATGGCTACAAGATTAAAAGAAGGTGAGT
CACAACCAAATCCATTTTAGCAGAAAGTATGCAatatcaaatttgttttt
ggttgttgaATTCATTTTCGGATAAATGAAAATGTGGTCTTTCGATTCCA
TTCGTACAAGTAACCGCATTCATTTCCGGTGTATATTGCCACAAATTGAC
GTCAACTGATAAGTTAATTCGAGTTTATTTATTACTGTCAGAAGTTAATA
GCACAGTATGGCTAGTCTACAGCTCAGGCTTTTAGGCCAGGCTTTTATTT
TAACGCTCgcaacgaaggaagatatgacgtagtcTAAGTATAGCCAAATC
CTCTCGTTATTTGAAATATCCAGGCTGATTCAAAGTTTTAACCTCGTTGT
GGCGTTGTTAAATTCCGAAAAAGTTTATAAATTTTGCATGTTCAATGTAA
TGCTTAATGCGGGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023483-exon-sc0000454-1491911889:171441..172656 | TCONS_00023483-exon-sc0000454-1491911889:171441..172656 | Clytia hemisphaerica | exon |
| TCONS_00023483-exon-sc0000454-1510915933:171441..172656 | TCONS_00023483-exon-sc0000454-1510915933:171441..172656 | Clytia hemisphaerica | exon |
| TCONS_00023483-exon-sc0000454-1575043694:171441..172656 | TCONS_00023483-exon-sc0000454-1575043694:171441..172656 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000454 | supercontig | sc0000454:171441..172656 . |
Blast
The following BLAST results are available for this feature:
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