TCONS_00024741 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024741
Unique NameTCONS_00024741
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length746

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024741 ID=TCONS_00024741|Name=TCONS_00024741|organism=Clytia hemisphaerica|type=transcript|length=746bp
ACCGAAATTGATACTTATACAACCGACGTTAACCAACTACAAAACGTCCT
CCGTCTTACTGCCCGTGAGAGAAGAGGCTTTCGTGATCATAATATCATCA
GGGTTTATCATTTATAAACCTCTCATCAGACATTTCATTTTTAATCATAG
AACCTGTTTGTGGTTGGTTGTTAAAAAAGAGTGAAACTAGTTTACAGTTT
AACTGTAGGATACTAAGACCTTGCTGTGCTGTCCAGTCTGGAAATTGTTT
AGATCTCCGGCGTACCGTACTATAGATTTGAGgaaattcttaaaatattg
GTGATGGCAAAACATCATCCTGATCTTATCTTTTGTCGCAAACAACCTGG
AGTTGCAATTGGACGGCTTTgtgaaaaagATGATGGTAAATGTGTGATCT
GTGATTCGTACGTTCGACCGGCTACACTTGTTCGGATTTGTGATGAGTGC
AATTACGGTTCATACCAAGGGCGTTGTGTGATTTGTGGCGGGCCAGGTGT
TTCAGATGCTTATTATTGTCGTGAATGTACAATCCAAGAAAAAGATcgtG
ACGGATGTCCAAAAATTGTGAACTTGGGAAGCTCAAAAACAGATTTATTC
TATGAACGAAAGAAATATGGATTTAAGAAACGCTAACACAAGGGATAATA
GACTTTTTAACTTTGTAACAtagcattttttttattttaaggaaACTCTA
AACATGCTATCTTTCTCTCTCCTTTGTGTTTCTTTCTCTATGTTTT
Run BLAST on NCBI

protein sequence of TCONS_00024741-protein

>TCONS_00024741-protein ID=TCONS_00024741-protein|Name=TCONS_00024741-protein|organism=Clytia hemisphaerica|type=polypeptide|length=110bp
MAKHHPDLIFCRKQPGVAIGRLCEKDDGKCVICDSYVRPATLVRICDECN
YGSYQGRCVICGGPGVSDAYYCRECTIQEKDRDGCPKIVNLGSSKTDLFY
ERKKYGFKKR
Run BLAST on NCBI

transcript from alignment at sc0000509:32791..42947-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024741 ID=TCONS_00024741|Name=TCONS_00024741|organism=Clytia hemisphaerica|type=transcript|length=10157bp|location=Sequence derived from alignment at sc0000509:32791..42947- (Clytia hemisphaerica)
ACCGAAATTGATACTTATACAACCGACGTTAACCAACTACAAAACGTCCT
CCGTCTTACTGCCCGTGAGAGAAGAGGCTTTCGTGATCATAATATCATCA
GGGTTTATCATTTATAAACCTCTCATCAGACATTTCATTTTTAATCATAG
AACCTGTTTGTGGTTGGTTGTTAAAAAAGAGTGAAACTAGTTTACAGTTT
AACTGTAGGATACTAAGACCTTGCTGTGCTGTCCAGTCTGGAAATTGTTT
AGATCTCCGGCGTACCGTACTATAGATTTGAGGTTTGAGATCTGCTGCCT
CAACTTTTCCCAGTTAAGTTGGCGCAGCTCCGGCGTAACATTTCCCTCCT
TTCCAGACTGGCTTGCTGTTCATCCTGGTTGCCAAAAATTAACATCTTCC
ACTATTCATAGTCTCCTATTTTACCCCTATTTTCCTTTCCTCCACGACCA
CGTCCACAGTTGACACGTCTACTCGTTTTATAAATTTCGCTATTTTCCCA
GACAGGATAACTCGTATAAGATTGGAAAGGGTTCATTTATAAAGTTTGCT
TTCAACTACCCAAAGCCCTAACCTTTTAAGTTTTATATAAGTGTGGAAAT
AAGCAGTTAAGCTATACGGGACACGGAAACATTTTTTTGTTGCAATCGCA
TAAATATGTTTCACTGTGTCCCCACGTTAAATCTCCTTGATTGGCAACTT
TTTTCGCTCAAAGTTTTTGTTACTGAAACAAAAGTTTCATTCTCATAAAT
TTTGTTTTACGTTCTGGAACCCATGCGACATACATGGAAACAAATTTTCA
TGCGATTGCAACAAAAAAAATTTGTTGCGATTGCATGAAAATTTGTTTCC
GTGTCCCCGAGGCTTTAGTCACACTACTAGAGCCCCTGTCAAAATGCGTA
CCAATCAAAGATTAATGCTTCGAAAGCGCTATATCGTTTACCTGACTCTC
AAGCAAAAAATGCAGCGCAAAACTTCTAAAAGGATTCATGGAAAAATAAC
CTGGCGCTTTTAAATGAACAGTGTGTCACAAACAGCAATATTTCAATCGC
ACGGAAGCGCTTCAAAACACCAGCTTTTTTGAGTTTTGTCTCATTTATCC
AAACGCTTCAATCTCGTGTAGGCTTAGGGGTCAAGACTAGAACCCCAAAA
CGAGACATTTGCCTGACCGAAAAAAATCATCATCGTCAATTTTGTTAATT
GTCAGAATCGTTTACTCACTGGAAATACGCAACTTTCTGAAGTTTCNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGGGTTCAC
CTGATTTCTAGGTGAACCAAGCTCTATAATTTTAGAACTTTGTCTGGCTG
AGGTAAAACTTATTTTTTCTAAAATTTTGAGCTTGGATATCGAGGCTAAT
GCTGAAGCCGACTGTGGACTGACCAGCCATATGAAATTGATGAAATTAAC
GTTCTCAAAAACTATGAGAAATTGCCTAAAATTTGAGCCACAGATGAAAT
AATTTGAGCCAAGCCAAGCTTGAGAACTAATTTGAAGATTACCTTAAGGG
AACTTATTTTTGGCGGGAACTAATTTTGGCGAGCAGCGAAAATCTTAAAA
AATTTTAATTTTGCCGGGAACTAATTTTGGCGAATAGTGTATTTTTTTAA
TTTTGGCGGGAACTAATTTTGGCGAATGACAGCGTAAATCTGTTCTATTT
TGCCTTATTTTGAGCAATTTTAATGAATTTCAGGGGTTATTAAGGCAAGG
AAACAAAAAATTCAATTTTAGCAGGAACATATTTTGGCGAGTGAGCAAAA
TATTTAATTTTGGCGGGAACTAGATTTGGCGAATTTCTCGCAGATTCGCA
AAAATTAGTTCCCGTCAAAATAAGTTCCCTTAAGGTAACTTCCCAAGAAA
AAGATCTACGGAGGAAACGGAACAGGACCCTGCCGACGCACTGGACTTAA
GGAACACTGGACACGCGCAAGTCTGGTGTAAAATGAGAAATCTTTTTACC
ACCGGACAATCTCTACACCCGACTTAAGGTAGTCGAATGTCTGGTGTCGG
AGAAGGATATTTTTGTCCACCGGACAATCAAAACACTGGACATCTGGTCC
GTCTGGTGTGTCCGGTGTTTCTTGATTTTTTGTTTCATAAATGTCCGGCG
TCCAAAATTCCCTGTGTGCAACACCGGACTGACACCAGACTTATTGCGTC
CGGTGTAGCGAAAGGATACTATTTGCCACCGGACAGTCTGGTGCGTCTGC
AGGGTCCTAACGGAACCCACCTAGATCCGCGCACTGCCGAATAGGCTATT
TCCCGGAAATTTTGCCGGACCTCAAACACTGACCCATTTACATGTGGGGA
ATTGTTCTTACTTTACTAGCGTATAAACTAGGCCTAAAAAATTGAAGCGC
TGTCTCAGGAATTGAATGACAAATTTTGGTTGGTTGATTTTGGCTGCTGC
ACGTTTTATTTTGTTTCAAACTTTCAAGTTTTAATTAATTGTTTTGTGAA
CTTGATTCAGCCATAGTTCGTATAAAAAACCCTGGTCTGGAACCTATTGT
TGTAACTTTTTGTTAACTTTTTCCTTTGTTAATAACGATTATAAAAATTG
ATTTGCTCAGTTTTTGATCACGTTAGCAAATATTTCCTTGGGATTGGTTC
AAAATTTAATCACATGATCAAAAAGTGAGCAAAACAAGATGATTTCTCAA
CGCAAGTTCAAGTAAGAAATAATAGAAAGAAACCATAGGCCTCAAGACCG
GGGTTTTTTATACGGACTATGATTCAGAAACATCCGGAGCAAAAAGTGCC
GTTTTTTTCGTGCTCCAAAAACCGGAAGATTTTCAGCGATTGCTCTGCAC
CGGAACTCCGGGAGCTGTATTAAGAATCACTTGCTCCGGTCCGGAAGCTC
CAGAAGAGCTCCATGACTTTCCAGAGAGAAAAATTGTGTTTTTTAGCTGC
TCCGGAAAACTGTGGAAGTTTCCGGAGCGTCGGGAGGGTCCTAATCAAAC
ACCAAATTAATTGAACACAATCGATTGCAACTACTTTTTTTTGGCTCAAA
GTCAATCAGCAATCCCGACCTTCCTCAGTTCTTATTGCTTCTATCTCTAA
AGAAGAGTGTCAAAATTAGAAGAGAGATGTCGACATTACATTAGACCAAC
TTCTTATGGTATATATTTAAAGTAACATCAGGCCCTACAGTAAGGCCCAT
TCTCGCTTATAAAGATACAATGATAGTCATATAAAAACCTTACATGATTG
AACTATAAAAAAAGTAAAAGAAAGCATTATAGAAGAGAATTTAAGGTATA
TACCGTAAATTGTTCTAATGTCGACACCCCTCCTCTAATTCAGACACCCT
TTTTATCAGCTGAAGTTGATAGAAAGGTTGAAACTGTTTTTCTTTGCTTA
TTGGTCAGAGAGGAATAATCCTTTTTCAATCAGTTATTGAAGCTTTTATA
TTATTCCTGTCTCTAAAGAAGGGTGTCAGAGTTAGACGAGGGGTGTTGAT
ATTAGACCAGCTTACGGTACTGTAAATGTAAAAATAAGGGATTATGACAA
AAATCAGTGCGTCACAAACAGCGATATTTCTATCGCACGGAAGCGCTTCA
AATCAAAACACGAGCTTTTTTGGAGTTTTGTCTCGTTTACCCAAACGCTT
CAATCTTGCGTAGGCTTAGGGTTCAAGACTAGAACCCCCAATACGAGACA
TTTGCCTGACCGAAAAAAATCATCATCATCAATTTTTTTAATTGTCAGAA
TAGTTTACTCACTGGAAATACGCAACTTTCTAAAAGTTTCGTTTTTTTTC
TGTTGTACTTCATTTTAAAAATAACGAAGATGAAAAGTTACCGTCAATCC
CGCAAGTAAAAGAAAGTATTCCGACTAGTCTACGAAAAATGCGCTCAATT
GTCGAATAGAATATCTCGCAAATTAATATATGCATAAAACTGACCAAAAC
TTTTCTTTCCAAATTTGGCAATGCATAATTATTACGAGCGGCCAAGAAAG
TTTGTGTGGCGAAAAAATTGCGCGATAAACAAAGCCCTAGAAAAACGCCC
ACTGAAAATTGAAACTAGGAATTTATTGAATATTTCACTAATGAATTATC
AAACTTTTTGATTTTTGTAATTATTATAAATTCATAATTTTTAAATACTA
TTTTTTGAAAGTCAAAGGACAATTAATATAAACTAGCCGGTACCCGGCGT
CACACGCCAGTTAAGCTGTAGCTGAACGCACTAAAAGTCCTTCGGATGTT
GAAGCTGGCTTAAAAAAATTATCAACAAATGAATAAAAAGATATCTTCAA
AGTTTGACTCTAAACCTCCACCGGAGATCTTTTTCTTGCTTCGCTCGCAT
TAAATACGCCGCCCAGTTTGAGAAAATTTGAAAAAATATTATGGTAAAGA
GGAGTAAAATGTAGAAATGAGAATTCTTCAAGAAAAAGCGAGAAAGCCAC
AAAGAATAGTGCAACTTTGTTTTTATCAGATTTAAAAGGATAAGTAAGTC
AATTCTAAATTGTTTTTTTAAACCCTTGTCATATAACTTTTTGAATTTAA
ACATGTAAAATGACAGTATCTTTTTATCGCCCTTTGAATGCTGTTATTGT
TCGACAAACTTTTTAGTTTTTATGTTTTGATTTACTTAACATTTGAAATG
TTCTTTTCTATAAAAGAAACTTGTTTTGTTTTGAAAAGAATTCGAATGTC
ATTAATAAATACGATCGTTAAATACATTTGAAAACATTTCAANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNATTTCAAACAAAAGAAAAGAGAAAAATCGGGGTCA
GGCAAAGCTGGGCAGAAATTAAAATTACTAAATGTAGATGGGCCTTAAAT
TTCAAAACAAAGGCTGAATAAAGTCTAAACCAGGCTTTATCCAATCTGTC
AATCAAAACAAACTTATCGAGAACAAAACATTGCTTGCAAAATCGAAAGT
GACACACAGAAAGAAAACAGAAAACAGACATACAGACTACGGCTATTAAT
ATATAGATTTAAGTTGATTGGGTGGATATTGGGCAGACGGGAGTTTTGCA
CGTTCCGAGATCGGAAATTAAAAATGAATTTTTTATTTTTGAATTAAGGA
AATATAATATAATATATTATACTTGATTGTCAATGCCAAAAGATATTTCT
TTACTTTACGAATTATCTGCTGTGTTGCTTCGCCACTTACCCCCAGATTG
TTTTAGTAGGCACTTCGGTTTCGTAAATAAAAACACGTGTATATGTTGAA
GCCAACTCCGGACTGACCGAAATTGCAATTACATAAATTATTGTGGAAGT
GAACGCTTTAGACGAATGTTTGGGAAATCAAAAAGACAACTTTTGTGAGA
ATGTTGAGTTTTGTTTATATGGCACTTTGTGATGGACTGACTTTCGTAAA
GCTAGATTTGCTTTATGTACTCTTTGCTTGAGAAAGTGATTGGACAGATT
AAAGTTTTTCACCCGTGCAGGAGCTCGCAGTTGTTCTGCTGATGTTATAT
AACAATTTACTATCTTATTCCCCTCCCCTTTCAACCTTCAAACAGCAGAT
AAAGTTGTCACTTTTGAAAAAAAATTGACAGGATTCAGGATATGTATTCA
CTGTAATGACTCCAGTAATAATTATGGATCAGAAATTACATTACTTTTCT
TTTCTTTTCTACTTTTGCATCGTTTGACGCACAATGACTCAGTGCAAAGC
TTTTGTTTTGAAGACATTGATGTGATCAGTCTTGCCAGGTACTGCATATA
ATGACACTTATTGTTTTTTGTATTTCAGGAAATTCTTAAAATATTGGTGA
TGGCAAAACATCATCCTGATCTTATCTTTTGTCGCAAACAACCTGGAGTT
GGTAAGAACCCTGGTTACAAAATCCCATTCCTTTTGTTTTGGTTTGTGCA
GATCTATTCATGATGCCAATGGAGAAATGACATCAATACAGACACTAATA
CAGAGCTTGATGGCTGACAGATATGTCACATACTTTAGAAATCATCAACC
CTGTCAGATACAATTCTCAAAATTTAATGACTTTACGATTTTTCTTCCTT
GCCAGAAATTTTTGGTTGCTGAAACCATGTTACTGTATCCAAATTTGCTT
AGGTGACACCCCTCCCGCCGTTGATTTTAAGTTATGGATATTTTACATTT
AAGTTTTTCAAACACACGTTTAAATAAGTTAGGGAATTCCAAACATTCTA
GTACAAAATCACATACTATACTAATCTAAATAACTCTTTTTCATTATAGC
AATTGGACGGCTTTGTGAAAAAGGTTTGTTTTTATTGTGCCAGTAAATAT
TTCAAAAGATTCTTCTCTAAGACCTTTATTCAACTAAGCTGAATGACCAA
AATTATACTACAACACCTGCTCTTCTTTCAAGCTTTATTTTGCTTTCCTA
CTTCAACTCGGTTATCAATTCCCTATGTATATTTATTATTGATGCTTCTA
ACTTAATATTCCCCGTTTTAATTTGATTAACTTCTAGATGATGGTAAATG
TGTGATCTGTGATTCGTACGTTCGACCGGCTACACTTGTTCGGATTTGTG
ATGAGTGCAATTACGGTTCATACCAAGGGCGTTGTGTGATTTGTGGCGGG
CCAGGTGTTTCAGATGCTTATTATTGTCGTGAATGTACAATCCAAGAAAA
AGATGTAAGCCTTTTTTATAAAACATAACAACAAGCTCAGAATTAGTTCT
TTTGGGCCTTCTTTTTAGAACAATGGAGCCTGGATTGCAGGAAGATGTTT
GTTTCATGGAAAAAAATTCCTTTTTCTTTTTTTGTTGCCCGGGGTAGGCA
AAATTTGGAGCGGGAACGTGCTGCTGATCAGGGTCCCTTTTTTAGGCTCT
GAAGATATCTGACAGGGTCCCAAATTTACTAATTCAACATTCATACCTGA
TAGAGTTGTCTTTTGGTTATTTTGGACAATTTTCAGGGTGAAAATTTGAA
AATTTTTCAATCTTTTGTCTACATTTCGTCATTTTTGCCACTTTTCAAGG
TGAAAATGTGGGAATTTTTTTCAATTTTCCTTCCGACAGGGTTCCGAATT
TACCAATTAAATTTATACCTGACAGGTTCCCTTTTTCAAACTCCAGCGGC
ACGTCCTCGTCGGCCGTCAAGGTCAGTGCCCTCTCCCCGGGGTTTGTTGT
AATTTCTTGCTTTTCCATTAATATCGNTTATACCTGACAGGGTCCCTTTT
TCAAACTCCAGCGGCACGTCCCCGTCGGCCGTCAAGGTCAGTGCCCCCTC
CCTGGGGTTTGTTGTAATTTCTTGCTTTTTCATTAATATCATGATTTAGT
ATAGACTATCCTACCTATCTAAATTGTAAATCACATGGAGGGGTATAAGG
GTAGGTGTTAGCCTACTGCACTACTGGTACAAACGACGTACAAACGACGT
ACAAACGACATACAACTATTGACATATTGTTTATTTAAGTTTCTTTTCAA
TTTTTAGCGTGACGGATGTCCAAAAATTGTGAACTTGGGAAGCTCAAAAA
CAGATTTATTCTATGAACGAAAGAAATATGGATTTAAGAAACGCTAACAC
AAGGGATAATAGACTTTTTAACTTTGTAACATAGCATTTTTTTTATTTTA
AGGAAACTCTAAACATGCTATCTTTCTCTCTCCTTTGTGTTTCTTTCTCT
ATGTTTT

Coding sequence (CDS) from alignment at sc0000509:32791..42947-

>TCONS_00024741 ID=TCONS_00024741|Name=TCONS_00024741|organism=Clytia hemisphaerica|type=CDS|length=1332bp|location=Sequence derived from alignment at sc0000509:32791..42947- (Clytia hemisphaerica)
CGTGACGGATGTCCAAAAATTGTGAACTTGGGAAGCTCAAAAACAGATTT
ATTCTATGAACGAAAGAAATATGGATTTAAGAAACGCTAAATGATGGTAA
ATGTGTGATCTGTGATTCGTACGTTCGACCGGCTACACTTGTTCGGATTT
GTGATGAGTGCAATTACGGTTCATACCAAGGGCGTTGTGTGATTTGTGGC
GGGCCAGGTGTTTCAGATGCTTATTATTGTCGTGAATGTACAATCCAAGA
AAAAGATCAATTGGACGGCTTTGTGAAAAAGATGGCAAAACATCATCCTG
ATCTTATCTTTTGTCGCAAACAACCTGGAGTTGCGTGACGGATGTCCAAA
AATTGTGAACTTGGGAAGCTCAAAAACAGATTTATTCTATGAACGAAAGA
AATATGGATTTAAGAAACGCTAAATGATGGTAAATGTGTGATCTGTGATT
CGTACGTTCGACCGGCTACACTTGTTCGGATTTGTGATGAGTGCAATTAC
GGTTCATACCAAGGGCGTTGTGTGATTTGTGGCGGGCCAGGTGTTTCAGA
TGCTTATTATTGTCGTGAATGTACAATCCAAGAAAAAGATCAATTGGACG
GCTTTGTGAAAAAGATGGCAAAACATCATCCTGATCTTATCTTTTGTCGC
AAACAACCTGGAGTTGCGTGACGGATGTCCAAAAATTGTGAACTTGGGAA
GCTCAAAAACAGATTTATTCTATGAACGAAAGAAATATGGATTTAAGAAA
CGCTAAATGATGGTAAATGTGTGATCTGTGATTCGTACGTTCGACCGGCT
ACACTTGTTCGGATTTGTGATGAGTGCAATTACGGTTCATACCAAGGGCG
TTGTGTGATTTGTGGCGGGCCAGGTGTTTCAGATGCTTATTATTGTCGTG
AATGTACAATCCAAGAAAAAGATCAATTGGACGGCTTTGTGAAAAAGATG
GCAAAACATCATCCTGATCTTATCTTTTGTCGCAAACAACCTGGAGTTGC
GTGACGGATGTCCAAAAATTGTGAACTTGGGAAGCTCAAAAACAGATTTA
TTCTATGAACGAAAGAAATATGGATTTAAGAAACGCTAAATGATGGTAAA
TGTGTGATCTGTGATTCGTACGTTCGACCGGCTACACTTGTTCGGATTTG
TGATGAGTGCAATTACGGTTCATACCAAGGGCGTTGTGTGATTTGTGGCG
GGCCAGGTGTTTCAGATGCTTATTATTGTCGTGAATGTACAATCCAAGAA
AAAGATCAATTGGACGGCTTTGTGAAAAAGATGGCAAAACATCATCCTGA
TCTTATCTTTTGTCGCAAACAACCTGGAGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013896XLOC_013896Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024741-exon-sc0000509-1575043694:42666..42947TCONS_00024741-exon-sc0000509-1575043694:42666..42947Clytia hemisphaericaexon
TCONS_00024741-exon-sc0000509-1575043694:34597..34669TCONS_00024741-exon-sc0000509-1575043694:34597..34669Clytia hemisphaericaexon
TCONS_00024741-exon-sc0000509-1575043694:34175..34198TCONS_00024741-exon-sc0000509-1575043694:34175..34198Clytia hemisphaericaexon
TCONS_00024741-exon-sc0000509-1575043694:33794..33960TCONS_00024741-exon-sc0000509-1575043694:33794..33960Clytia hemisphaericaexon
TCONS_00024741-exon-sc0000509-1575043694:32791..32990TCONS_00024741-exon-sc0000509-1575043694:32791..32990Clytia hemisphaericaexon
TCONS_00024741-exon-sc0000509-1510915933:42666..42947TCONS_00024741-exon-sc0000509-1510915933:42666..42947Clytia hemisphaericaexon
TCONS_00024741-exon-sc0000509-1510915933:34597..34669TCONS_00024741-exon-sc0000509-1510915933:34597..34669Clytia hemisphaericaexon
TCONS_00024741-exon-sc0000509-1510915933:34175..34198TCONS_00024741-exon-sc0000509-1510915933:34175..34198Clytia hemisphaericaexon
TCONS_00024741-exon-sc0000509-1510915933:33794..33960TCONS_00024741-exon-sc0000509-1510915933:33794..33960Clytia hemisphaericaexon
TCONS_00024741-exon-sc0000509-1510915933:32791..32990TCONS_00024741-exon-sc0000509-1510915933:32791..32990Clytia hemisphaericaexon
TCONS_00024741-exon-sc0000509-1491911889:42666..42947TCONS_00024741-exon-sc0000509-1491911889:42666..42947Clytia hemisphaericaexon
TCONS_00024741-exon-sc0000509-1491911889:34597..34669TCONS_00024741-exon-sc0000509-1491911889:34597..34669Clytia hemisphaericaexon
TCONS_00024741-exon-sc0000509-1491911889:34175..34198TCONS_00024741-exon-sc0000509-1491911889:34175..34198Clytia hemisphaericaexon
TCONS_00024741-exon-sc0000509-1491911889:33794..33960TCONS_00024741-exon-sc0000509-1491911889:33794..33960Clytia hemisphaericaexon
TCONS_00024741-exon-sc0000509-1491911889:32791..32990TCONS_00024741-exon-sc0000509-1491911889:32791..32990Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024741-proteinTCONS_00024741-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000509supercontigsc0000509:32791..42947 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.84253	1.23957	0	2.13586	0.52039	1.51527	1.17848	0.385416	0	0	0	0	0	0	0	0.792331	0.64233	0	0	0	1.29983	0	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR005345PHF5
Blast
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BLAST of TCONS_00024741 vs. Swiss-Prot (Human)
Match: PHF5A (PHD finger-like domain-containing protein 5A OS=Homo sapiens GN=PHF5A PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 4.246e-70
Identity = 106/110 (96.36%), Postives = 107/110 (97.27%), Query Frame = 1 
Query:  304 MAKHHPDLIFCRKQPGVAIGRLCEKDDGKCVICDSYVRPATLVRICDECNYGSYQGRCVICGGPGVSDAYYCRECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 633
            MAKHHPDLIFCRKQ GVAIGRLCEK DGKCVICDSYVRP TLVRICDECNYGSYQGRCVICGGPGVSDAYYC+ECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR
Sbjct:    1 MAKHHPDLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
The following BLAST results are available for this feature:
BLAST of TCONS_00024741 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PHF5A4.246e-7096.36PHD finger-like domain-containing protein 5A OS=Ho... [more]
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