TCONS_00024785 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024785
Unique NameTCONS_00024785
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1222

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024785 ID=TCONS_00024785|Name=TCONS_00024785|organism=Clytia hemisphaerica|type=transcript|length=1222bp
TTTGCTTCgacaaaaaccaaaatattttgaaaccaAAGAAAGAATGACTC
GCTTTTGCTTTTCGAAATTTGTTTCAGGGATATTTATGGTGACCTTACCA
ATTTATATTCAAGGTCAACAAATTAGAAGAATATCTGAAATATCTGGCAG
AAATGTTTTTTATGGATACGCAAATATGGTGGCCCATCAAGGTCACATCC
TCAATGTGACTGCATTACAAACAATTACAATCAACATAACTTCACCTGCA
AAATGCATTACTAATTGTATCGATGTTGAGAATTGTAACAGTGTCAATGT
CATTATTGGACAAAATTTGGAATGTCAACTTCTTGATACTGATCGATTCA
GAAATTCTTCATACTTCATGCCACAGACACAATCCACTCACTATGCTATT
AACCATGATTGTGAATGGGATGAGACATGCATCAATCCAAACCATAAATG
TATTCCTAATTATCAAAATGGAACTCACGAGTGTGTTTGTCCGTTTCAAA
CCTACGATGAACATTGTATCTTCGAACTGACAGATAACATGGCACTACAC
AAAACTGTCTCAATGTCATCTGTGTTTCGCATCAATTATGAAGGCTCATT
TTGTACAGATGGGACataccttatcggtagaaatttcgtcggtaaaaagt
gacgaaaaaatcGCTTAGTGACGAAAGTTTTTaccgacgaatattttccc
cggccttaatgcgcttaccaaaaccagcaagtgacgaaagTTTTTGCCGA
CGAATATTTTTTGCCGACGAAATTTTCCACCGACGAAAtttctaccgata
aggtatGGACCCGACGTTCCAGTTTGTCACACGAACCAGGCACATTCAAA
TTGGCTCCGCATCGATCTTGGTTCACTGAAAATCATAACATTCCTTGTTA
TACATAATCGAGTTAAACTAAATAAGGAACACTTATTAGAACGCCTGTCT
CATACTGATATTTACGTCTTTAACAATGATAACCCAAATGACAATCGCAG
GTTATGTACTCGCATTGGTGATACTAGAGCTGAAATCTATATGGCTCGAT
GTATCAAACCTCTTTTAGCACGAAACGTGGAGTTAATTCAACTTGATATT
GGTTTCGAAAGACCAATAAATCTAGCTGAAATCATGGTTTACTGATCCCA
AAAGTATGGCATGAAAGAAACAAATTATTAAACGTTTTCTTATAAATTTT
GATTACTATATTTCATTTTACG
Run BLAST on NCBI

protein sequence of TCONS_00024785-protein

>TCONS_00024785-protein ID=TCONS_00024785-protein|Name=TCONS_00024785-protein|organism=Clytia hemisphaerica|type=polypeptide|length=216bp
LLRQKPKYFETKERMTRFCFSKFVSGIFMVTLPIYIQGQQIRRISEISGR
NVFYGYANMVAHQGHILNVTALQTITINITSPAKCITNCIDVENCNSVNV
IIGQNLECQLLDTDRFRNSSYFMPQTQSTHYAINHDCEWDETCINPNHKC
IPNYQNGTHECVCPFQTYDEHCIFELTDNMALHKTVSMSSVFRINYEGSF
CTDGTYLIGRNFVGKK
Run BLAST on NCBI

transcript from alignment at sc0000510:128579..144913-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024785 ID=TCONS_00024785|Name=TCONS_00024785|organism=Clytia hemisphaerica|type=transcript|length=16335bp|location=Sequence derived from alignment at sc0000510:128579..144913- (Clytia hemisphaerica)
TTTGCTTCGACAAAAACCAAAATATTTTGAAACCAAAGAAAGAATGACTC
GCTTTTGCTTTTCGAAATTTGTTTCAGGGATATTTATGGTGACCTTACCA
ATTTATATTCAAGGTCAACAAATTAGAAGAATATCTGAAATATCTGGCAG
AAATGGTAAGAAATTTTGATACAATTTATATTTATTGTTAAATTTCACTA
ATTCGACCCGGAGCAGTAATCCATTTTTTTTAATCGACAGAGATTTTCGA
ATTATAGAAAATATTTTACAAAAGGGTTTCACACATTGACAGGAACTGAA
AATTAGTTCGAATTATAGAAATAATAGAATAATGGATATTAGAATTGAAG
AAGGGTACTTAATGGTAAACCTACTGCACATTGCCGATTGTGTAAGAAAG
GATTGCATCGAATTGAGGGGGAGGGGGTAATTGAATGGTAAAGTGGCACG
CGTCTGACTACAGTCAAAAAGGTGTATTATATACAGTAATATTCTTCCAA
CTCTCTTCAGTTTTTTATGGATACGCAAATATGGTGGCCCATCAAGGTCA
CATCCTCAATGTGACTGCATTACAAACAATTACAATCAACATAACTTCAC
CTGCAAAATGCATTACTAATTGTATCGATGTTGAGAATTGTAACAGTGTC
AATGTCATTATTGGACAAAATTTGGAATGTCAACTTCTTGATACTGATCG
ATTCAGAAATTCTTCATACTTCATGCCACAGACACAATCCACTCACTATG
CTATTAACGTAAGTCACAGGTCCTTCTTAACCAAAAAGTCAAGATCCGGT
TTAGTAGCAAATTATTTTTCACCGCTAGGGTTCCGACCTAGATGATTTGT
TCCTCTGGTTTACAGATGTGTAACGCTTTTCAAACAGTACTTATAATACC
TCAAGGGGATTAATTTTCACGGGAACTTATTTTTGCGAGACAATTTTTTT
GCGAAATAATTTAATTTTCGCGGGACTTATTTTCGCGAAGAGGGGAATTC
TAAATTTTCGCGAGGATAAAATTTCGCGAATCAGCCCCTTTTTGACCGAA
TTTCTTTCATTTTCCTAGGGGTTCAGGCAAAAATCATGATTTTAAATTTT
TCGCGAGGATTATATTTTGCGAATTTCGCGAATCCACAGGTTTTTACAAT
TTTTGCAGGGATTATATTTTGCGAATTTCGAAAAAACTCGCGAAATTCGC
GAAATATAATCCCCGCGAAAATTAATCCCCTTAAGGCATATGAACGAGGA
GTGTTCACTTCGCGTTTAGTGAAGTAGTTCGCGAGCGCAATGTCTCTCAA
GAAAACATCGAAGAGTGGCGTCTTCAAGAAGCGATCGGGAATCAACCAGT
TTTTGAGTGAAAAATCTCTATTTCAAAGCCTTCAAACAAACGAAACCAAG
TCTTTCGAATTGAAAAAAGAGAATAAAAGGAAATGCAGATACAAACAGCT
GGAGTTTTCCCAAACTGGCTCTTCAAAGGGATCAAAGTTGTATCAAGATC
GAAAGCAGAAATCCAGTAACCAAGAGAACGTTATAACTATCATACCAGAA
ACAGATACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCATACCAGAAAC
AGATACAGAGGGTGAAGCAGAGGGGAGCAAAATGACTTTGATGGCTGAAC
GTTTTCAACCAAAAGTGGTATTGAAAGACATTATTAACAATGCAGTGATT
CTGATAGTAATACTTGACCTTGTAAATTGTATGGGATGGGACTTTTTAGC
TACCTTCTGTTTCGCCCTCTTTGTGCTATCAAAGGCTTTTTGAAAATTCT
GAAATGCTCTTTTTCTCTTTATACCTATGGTCAATCAGTTTGTTATGATT
TGCTGACATAGGAGAATAATATCAAGACTTACTAGGTATGAAATGATTTG
AACCCTTATTCCTTTAAACATTAATTAGAAGAAATGTATTACGAGTATGT
TAAACTTAATGTTATACAGAAGATACGATTTGTATTTAATTGATATCGTA
TAATTTATTATGATTTCCTGCAAAGGATCATACTATAATAACCGAAAGTG
TCTCTTGTTACTCGTTGTTACCGTTGTTACTCGTTATTACCTGTTGTTAC
ACTTTTTACAAAACTTTCAAAAAAGTCAAAAAATATTCTAAGTCTAAATT
TGAGTCTTGTCACCCGTTGTCACCCGTTGTCACCCGTTGTTACCCTTGTC
ACACTTTTTACAAAACTTTCGAAAAAGACAACAAATATTCTAAGTCCAAA
TTTGAGTCTTGTCACCCGTTGTCACCCGTTGTCACCCGTTGTTCCCCTTG
TCACACTTTTTACAAAACTTTCGAAAAAGACAACAAATATTCTAAGTCCA
AATTTGAGTCTTGTCACCCGTTGTCACCCGTTGTCACCCGTTGTTACCCT
TGTCACACTTTTTACAAAACTTTCGAAAAAGTAAAAAAATATTCTAAGTC
CAAATATGAGTCTTGTTACCTGTTGTCACCCGTTGTCACCCATTGTTACC
CTTGTCACACTTTTTTCAAAACTTTCAAAAAAGTCAAAAAATATTCTAAG
TCCAAATTTGAGTCTTGTCACCCGTTGTCACACGTTGTTACCCTTGTAAC
ACTTTTTACAAAACTTTCGAAAAAGTCAAAAAATATTCTAAGTCTAAATT
TGAGTCTTGTCACCCGTTGTCACCCGTTGTCACCCGTTGTTACCCTTGTC
ACACTTTTTACAAAACTTTCGAAAAAGTTGAAAAATATTCTAAGTCCAAA
TTTGAGTCTTGTTACCCGTTGTCACCCGTTGTCACCCGTTGTCACCCGTT
GTTACCCTTGTCACACTTTTTACAAAACTTTCGAAAAAGTTGAAAAATAT
TCTAAGTCTAAATTTGAGTCTTGTCACCCGTTGTCACCCGTTGTCATCCG
TTGTTACCCTTGTCACACTTTTTACAAAACTTTCGAAAAAGTTGAAAAAT
ATTCTAAGTCCAAATTTGAGTCTTGTTACCCGTTGTCACCCGTTGTCACC
CGTTGTTACCCTTGTCCCACTTTTTACAAAACTTTCGAAAAAGTTGAAAA
ATATTCTAAGTCCAAATTTGAGTCTTTTTACCCGTTGTCACCCGTTGTCA
CCCGTTGTTAACCTTGTCACACTTTTTACAAAACTTTCGAAAAAGTTGAA
AAATATTCTAAGTCCAAATTTGAGTCTTGTTGCCCGTTGTCACCCGTTGT
CACCCGTTGTTACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAA
TATTCTAAGTCTAAATTTGAGTCTTGTCACCCGTTGTCACCCGTTGTCAC
CCGTTGTTACCCTTGTCACACTTTTTACAAAACTTTCGAAAAAGTCAACA
AATATTCTATGTCCAAATTTGAGTCCTGTTACCCGTTGTCACCCGTTGTC
ACCCGTTGTTACCCTTGTCACACTTTTTAGAAAACTTCCGAAAAAGTCAA
AAAATATTTTAAGTCCAAATTTGAATCTTGTCACCCGTTGTTACCCTTGT
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NGTGTAGATGATTCTGTCGAGCTGATGATTTCCATTTCTATGTCTGCCGA
ATTATTTAGATTTTGACTTGCAATAGCTTTGGATGAACACATTGATTGAA
CGCTTTGCATAATGAGGCCCCCCCCCAGCGGACTCTAAATTCACGCATTC
ACGCAAAATTTTTTCGCAATTCACGCATTCACGAAAGTTTTTCTCGAAAT
TCACGCAAACCCGATTTTTTGGGAAATCGGGGAAATTTTCGGAAAAAATC
GGGGAAATTGTCAAACATTTCTACAAATTTGGGTGAAAAGCCAGTTTGCA
GAGTCTGAATTATCAGAGAAGTCGTTTGTTTTTGTTAAGTAGTCGAGAGT
GGGGCAGACGTTAGACATTACAATCTATTATAAATGGCAGAATGCCCTCG
TATACGAGGCCCCCCAGCGGAACCAAAATGGCAAGGCTGCTACACTTGAG
ATATTTTTCCGCGACCGGGTCTGGTCATGCACTTGAGAAAAACTTAACTC
AGTAGTGATTTTTTCCTGTACACCTGACTATAAGCACATTAGCTTAAAGC
GCTACTTAAGTTTTTAACATTAATCACATGCCATCACGCAAAATATTTGA
TTCTTCTAACATGTCACTGTCGTTTAGAAAAGGTGAAACTTCTCCAGTTA
AGGTATCGCGATAGTAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAGTAAGTGAAAA
GATATGCACCGCAGGCGAATTTTTGTACAAAAAATATCTTAATCATTATC
AAAAATAGGTCAAACAAACTCCAGGGTGACACCATAATGCTTAAATAAGG
GGTAAGGAGGCGCAACCATGGTTTGCGCAGAGAGGAAATTTTTTGTCACC
TCGTGTTTGGCTAAAAATGCTATCTTTAACACCATTGAAAAAGAATGTAG
TCAAAATTCGTTAAGAGGCGAGGTACGATCGCTTGATAGTTTGCAAAATG
AGGTAAAAGGATGAACATTTGTTGCGAGCGAAGCGAGCAAACAAAAATTT
TAAAAAGAATAGTTTTAATCAGGGCTCGCGTCTTGATTTCCTAACGTGGA
GGGGCCGAAAACATAGNNNNNNNNNNNGGTTTGCGCCGACAGGGGAAATT
TCTATTTTCACACTCTGATGTGCTTAAATACGACTCCATTTCAGACTGAT
TTTGCCAAGAAATGAGGTTCTCAAAAGTCGGCATCATGGGTATTAAATAT
TTCTTTGAATTAAAAATTTGTGGTGGGGCCTGACTAAACTATACTTGCAC
TCGACCTTTGGCGAGTGCTGCACTCAAAATCTCGAACAAACGTGCCACGT
TCTGCAAACTGGATGAAAAGGGAAATTCCCCGAGTTCACGTAAAAAACAG
CGCAGATTCACGCATTCACGCAATAGAAAATGGATTTTCACGTTCACGCA
AGTTTTTTTAATTCACGCATTCACGCAATTTTTTTTCAATTTTCACGCAT
TCACGCAACCAAAAAAGCCCATTCACGCATTCACGCAAACCGCTGGGGGG
GCCCCCATAATGCTGTTCACTTCTGTGCATTATTGAGATTCGATACTACT
GGGCTCAAATGCTTCATCATCTGACTCAATTGGGATAGCCATATTGTTGC
TTGTTGATTTTGAACAACATTGTCCGTCGTCGACATCTAGACTAGCTTGT
TTTGTAACCAATGGACTCTTTGATAATGCAGCTAAATCTTTAAATACCCC
TGAAATCGCCACTTGGTGATCCTTGCGAGCCGTGCCTAGCATTTTCTCCA
TGCATTTCTGTCCCTGTGTAGCGACTATTCTCGATTGTTTCTTTTTGTAG
TGTACCTTTGCAACATCAGAGCTATGCTTNNNNNNNNNNNNNNNNNNNNN
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GCAACAAGAACAAGAAGGAATTAAATGGAATTCTCCAGGGCATGATTTCT
CAAACTGTTCAATAAGGAACATAAAAGAGACTCAATTGATGTTCCTTCAT
GTACATCGCAATGCGATATTAACAAAATCAAAGTAAGAATCGTCCTGCAT
AGAAAATTCCCTAGGCACCAAGAAATGAATACAAATTCCCTAGATAACGA
CTTTAGATATGATAGAAATCCTTTGTTGTAAACATCGTTACTTGTTGTGT
AATATAGAATTCTATGATATGGAAGAGTATAAATACATCTACATTAAGGT
AGTCGTTTCAGAAAATATACAATCGATAAAAATTTATCCTCATCATCCTC
GTCCAGGTGGAGAGTCGTCTAAATCTTTTTGCAAGCAGAAGCTATCTGGT
GTTCCTGTCATAATTGCATGAAAATAAAAAGGATACTACAGTATGTGGCC
CCCAAAACGTCAATCAAATTTAAAATTTCTCTCACATCTAGAGGAAAAGA
GGCTTTACAAAAATTTTTGTTGCATGAAAAACTTTAACATCTCTACTTTA
TTTTCTGGAAATTCTTTTTCAAAATTTTCAATTTCAACAATATTTTGTAA
TCGCTTAAAGGTAGGTAGCTTTTTTCTAATGGCCCCCAAAACGGAGGTTT
GCAATTTTAGCGATTTCTCGAGATATCTTTAATAGATATGAGTACAAAAT
TTTGACCATACATGTTTTTTTTCTATAAGCATAACGCTTATAAGCATACG
AAGGCTCAGATTTGCAAAACTCCTAAGCATAACATGAGCATATAAGTCAG
CCTAAAATATTTTTCAAGAGGTCATTTTTATCTGTTTAAAAAGGTTTGGT
AGAGGTCAAGTAAAAAATAAGACATTCTACGGCTCGCTAACATTCCACTG
CTCCCAAAGTCTGAACAAATCTTTACAAAATTTCTGATATTTAATTAAAA
ACTTGGCTCGGGGTGAATCATAAACATGATTCTTAAGCATATAATAAGCA
TAAACTATGCCTGGATGCATTGAAAACTTAAGCATACACGAGCCTGACCA
AGGGGCATACACTTGCTTATAAAAAAAAATATGTAGTTTGAAAATGTGAT
TTGGAGGGTTTTGGGCATAAATTTGTTTGATAAAATTTTTACAGTATGCC
CCTGGTTGTCAAAATGCAGATTTAGGGCCCCCAAAACGTAGATGTAGTTA
AAATCAAATTATTAAGCCCAGTGGTAGTAGGAGGAAAAACTAGGAAAATA
TTTGTGTTTTCCCTTAAAACGACCTGATGGATGTAAAATTTATGATTTTA
ATGAAATATTTCAAGATTTTCGATATTGCAAAGTCCAAACTGAAAATTTA
GAAATTTTCAAAATGACAATTTTGATTTAACAACGTCTTAATCAAGTTTC
TGAAAACAAATCTCTTTTAAAAATAGTTCCATTCATGTATGGAATAAGCT
GTAAAAATTTTAGAAAAAAAGCTAAACTGAAACTGAAAATATTAAGCTTT
GAAGATATTTTTCTCCTATATATTTTGCAAAAAAATTACAGAATTTGCCG
TTTTTGCTGATTCAGCGAAAATTTTTATATAAAGTGTTAATTTTTTGTTA
TAAACTATTAAGTCAAGTTGATAGGAATGGAATTCCAAGATTTTTTGCTG
TTTCTCATATTTAGAATTTTCGGTTTTATCAATGCTGATTCTAGGACCCC
AAAAATACTGGTTGACCTTCAAGATGCTATATCTTTTACCCAGCCTCTAA
AGTCACAGATGTATCTGCATTTTCTGAACGGCATTAGGTGTAGAAAGTTT
CCTATACCCAATTTTCATAACTTATTTTCCGTATCCAAGGAGCTAGAGTG
AGTTATATGCAATTTTTATCTAATTTTGCTGTTGAAATATTTCCTTCAGA
CGCAAATATATTATTTTGAATCTGTCTCAAACCAGCAAAATCATGCTCAT
TTCCAAGTATAACCATCATTCTTTCAAAATAAACAAAAATCGTCTAATTC
TGATAAATGTAAGGTCAGAATCTTCATTTTAATGACGACCTCCGTTTTGG
GGGCCGTCCCCGTTTTGGGGGCCATATACTGTATTGTATGAAGGGAACGA
GAGATTTAAAAACATGTTTTTTTTTCAAAACTATATTTTCCTCAAAAATT
TTAGCATGATTGTGAATGGGATGAGACATGCATCAATCCAAACCATAAAT
GTATTCCTAATTATCAAAATGGAACTCACGAGTGTGTTTGTCCGTTTCAA
ACCTACGATGAACATTGTATCTTCGAACTGACAGGTATGCTAGTATGTAG
TAGAAATATGACAGTTCTACTCCAGCATGCTCAAAGCGAGTGACTCAATG
TGTGAAAAACAACTCAATGTGTGAAAAACGACTCATTGTGTGAAAAATGA
CTCAATGTGTGAAAAATGACTCAATGTGGGAAAAATAATGCTCAAAATGT
GCTCCCAGAAACCTAATTTAAGCTATGGATAAATATTCCGTCTTATTCAT
TAGCGAGAAAATGAGCTTCGTTCGAGTTTGCTCTAAGATCTGGAATACTT
GGTTCACTACTAGAGGATTTCTTTACTCCCTTGGATTTATCTTTTTTACC
CTTTCTCTCTGTTAAACAATGGCAACACCAAATCAAAAAAGAAGTTTATC
CTGTCCAGATGCTCAACAGAAGAAACAATGTTTCAAGAGCAGAATTTCAA
GGTGGAAGAATGACAGAACCTTAAATTTCAATGTTGAAAACTACTTTGAT
CAAGAAGAGGAATTCTTTATCATAACTCAAAAACTTAGTGGGCAGCATAC
CAACTCAATCATTTTCTCTCCTGACAAATCTGATCTTCTCATCGCTAATG
TTACTGGTTATCTTTTGGAATGGAAACGAAAGAAGTACAAGAATGAAATG
CAAAACGTGTTTCTTAAGATCATGCGAGAAAAAGTCTTCCAAGTGCGGCG
AGAAATGTGCGAAGGATGTTTGGAGGACTACCCAAGTCAACTTCATCACT
ACTGTCTCGCAACGGAGACTAAACAATTTCTAGAAGATGCATTTTCGAAT
CCCCTTGAAGTGGTCGATGAAGAAGAAGCCAACGAAATTTGCAACAAGAC
GCTACAGATGAATGGGGAAATCAAATATTCCAAACAAGAACTCTTAATTG
ATGAGCAATGGGTCACAAATTTGAAACAATTAATTTTAAAATATTTGAAT
TGTTAAATTATTTTATTACTCAAATTGAACGTGGATACACCAAATAAAAA
ATATGCAAATATTTAGGATTTTAAGATTGCTTAAATAAATGTAAAGATAC
TCAATATTATAGATACGAATGTATTTAAGTTATTACTATAATCCAAAAAC
CCTATGTGACACTACTTTGAGCTAAAATCGTAGAGGCAATAAAAAAGAAC
TAAGAAAACAAACATTTATTGCTTGATGGTAATATATTTCTAGCTTATAA
AAACAATTTTATCATTTACAAGGATCAAATCTCATTCTTTCATTGCATCA
TTTGGAATTTGTCGATTAATTAGAAAGGTTGGTTTTAAACTTATTTGAAG
AAGTAGCATCCTTACTTACAAATTTATATGCAAAACACAAGAGTAATCCG
ATATCAAGTTTCTCTTTAGGATCCTGGTTTCTCTCTAAGATCTTTGTTTC
TTCCAGATTACCTAGTCTTTATTGGTCCACGTCTGTTTCTTGGTCCGGGA
CTAGCTTGAGAAATCTAGTCTTACTTGATCCTCTTTTGGGACTCCAGTAG
TCCTATACCTAGTCCTTGTTAGTCCTTTTTTTGAGACTAACCAATTCTTA
TTGGTTTTTTGTGTCAACATAGCTTTTAGACTTCTATTAGGACTACCCAA
TTCCTGTTTCGAACTACTTAGTTTTGATAAATCGTTTTCGGAATTAGCTA
AATCCTGTTTTGGATACCCAATTTAAGCTTCAGGAGTATCTAATCCTCTT
TTGTATCTGCATAGTCCTAGTTTAATTATCCTTAGGATTAACGGGATTAC
CTAATTCCTTCTTTGGAACTAACCAATCCTTATTTGGGATTACCTAATCC
CTCTTTGATGCTATAAATCCGATCAACTTTGACGTTTTAAGTCATCACTT
TATGATAAACACCGCCAATGACACTTTACAAAGGGTTAGAGATGAGGAAG
ATATGGACTTTGAAGAAGCATTGGAGTTCGCTCTTGAAAAACGTTGCTTT
CTAATTAATCGACAAATTCCAAATGATGCAATGAAAGAATGAGATTTGAT
CCTTGTAAATGATAACATTGTTTTTATAAGCTAGAAATATATTACCATCA
AGCAATAAATGTTTGTTTTCTTAGTTCTTTTTTATTGCCTCTACGATTTT
AGCTCAAAGTAGTGTCACATAGGGTTTTTGGATTATAGTAATAACTTAAA
TACATTCGTATCTATAATATTGATATTTACATTTATTTAAGCAATCTTAA
AATCCTAAATATTTACATATTTTTTATTTGGTGTATCCACGTTCAATTTG
AGTAATAAAATAATTTAACAATTCAAATATTTTAAAATTAATTGTTTCAA
ATTTGTGACCCATTGCTCATCAACTAAGAGTTCTTGTTTGGAAAATGCAT
CTTTTACAAATTGTTTAGTCTCCGTTGTGAGACAGTAGTGATGAAGTTGA
CTTGGGTAGTCCTCCAAACATCCTTCGCACATTTCTCGCCGCACTTGGAA
GACTTTTTCTCGCATGATCTTAAGAAACACGTTTTGCATTTCATTCTTGT
ACTTCTTTCGTTTCCATTCCAAAAGATAACCAGTAACATTAGCGATGAGA
AGATCAGATTTGTCAGGAGAGAAAATGATTGAGTTGGTATGCTGCCCACT
AAGTTTTTGAGTTATGATAAAGAATTCCTCTTCTTGATCAAAGTAGTTTT
CAACATTGAAATTTAAGGTTCTGTCATTCTTCCACCTTGAAATTCTGCTC
TTGAAACATTGTGTCTTCTGTGGAGCATCTGGACAGGATAAACTTCTTTT
TTGATTTGGTGTTGCCATTGTTTAACAGAGAGATTGGGTAAAAAAGATAA
ATCCAAGGGAGTAAAGAAATCCTCTAGTAGTGAACCAAGTATTCCAGATC
TTAGAGCAAACTCGAACGAAGCTCATTTTTCTCGCTAATGAATAAGACGG
AATATTTATCCATAGCTTAAATAAGGTTTCTGGGAGCACATTTTCAGCAT
TATTTTTCACACCTTGAGTCATCTTTCACACATTGAGTCATTTTTCACAC
AATGAGTCATTTTTCACACAATGAGTCGTTTTTCACACATTGAGTTGTTT
TTCACACATTGAGTCACTCACTTTGAGCATGCTGGAGTAGAACTGTCATA
TTTCTACTACTTATGCTACTACAATGTAGGTTCGATCCTCGGTCGGGTCA
TACCAAAGATTCCCAAAATGGTACTTTATGTCTCTCTTCTTGCTGCTCAG
CAACTAAAGAGACGGATCAAGGGACCGAAAGTGGAAAAATCCAAGGAAAG
GAGTGGCGCCCTCCCCCACCTTCGAATAAACAGCTATACGAAAAGGAAGC
CTTCGGGTCTTCCTCGACTGCGGTCGCAAACTTACTTACTTACTACAATA
GAACCCTGAGGGGTAAAAGTCGATGTAAAGCGAGGTATGTAACGTAGATG
CGATCCCAAAGTTTTTTAGGCTTCCCAAAATGCACTGTAAGAGTCGGAAT
GATTGATAGAAGTGCGCTGTAAGGGTATATAAAGTGAGTAAGGTAAAGTT
TCTTGAGAAAAAGTCTGACTATTCTGGCAAAAAATTCCAGACGCATGGTA
AAGGTAATTGTTTCACCTACTTTCCTGTAATTTGGAGAGCCCAATTTTCG
TCCTACAAATCTAAGCTAGCCTGTTTCAGTCACTAGGATAAATCATTTCT
AGTAATCTAACAATATTCCAAGGCAAACTTAAAATCTCTAAAGCGTTGAA
AACGCTAAATCCGAGTGTCTTAGCTTTGTGAATACGAACTTAGTTAATTG
GGCTACGGCCATGTTCAGAAGTTACAGTTCGGCTCCGTTTCGAAACGAAA
CGGTTCCGAGACGCATGTGAACGTCAAAATTCGAAACGTCAAAAAAGAAG
ACGTTACAACGCAAAACAGATCAAAACGGATTCGCTTCACTTTTTTCATC
GAAACAGGACTGTTCCATTTTCTTGCTCCGCGACGTTCCAAAACAAATAT
GAACCACACTCGTTCTGTAACAAAAATTATACCGGAGCGAAACGGTGAAC
ATGGTCTACGATTACACCTTCCGCGGAATAGAATTTTCGATAGAGTTAAG
TTTTTCTATTATTCCGAACGAGTGATATTTTTTTCTCTCTCTCTAGATAA
CATGGCACTACACAAAACTGTCTCAATGTCATCTGTGTTTCGCATCAATT
ATGAAGGCTCATTTTGTACAGATGGGACATACCTTATCGGTAGAAATTTC
GTCGGTAAAAAGTGACGAAAAAATCGCTTAGTGACGAAAGTTTTTACCGA
CGAATATTTTCCCCGGCCTTAATGCGCTTACCAAAACCAGCAAGTGACGA
AAGTTTTTGCCGACGAATATTTTTTGCCGACGAAATTTTCCACCGACGAA
ATTTCTACCGATAAGGTATGGACCCGACGTTCCAGTTTGTCACACGAACC
AGGCACATTCAAATTGGCTCCGCATCGATCTTGGTTCACTGAAAATCATA
ACATTCCTTGTTATACATAATCGAGTTAAACTAAATAAGGAACACTTATT
AGAACGCCTGTCTCATACTGATATTTACGTCTTTAACAATGATAACCCAA
ATGACAATCGCAGGTTATGTACTCGCATTGGTGATACTAGAGCTGAAATC
TATATGGCTCGATGTATCAAACCTCTTTTAGCACGAAACGTGGAGTTAAT
TCAACTTGATATTGGTTTCGAAAGACCAATAAATCTAGCTGAAATCATGG
TTTACTGATCCCAAAAGTATGGCATGAAAGAAACAAATTATTAAACGTTT
TCTTATAAATTTTGATTACTATATTTCATTTTACG

Coding sequence (CDS) from alignment at sc0000510:128579..144913-

>TCONS_00024785 ID=TCONS_00024785|Name=TCONS_00024785|organism=Clytia hemisphaerica|type=CDS|length=2604bp|location=Sequence derived from alignment at sc0000510:128579..144913- (Clytia hemisphaerica)
ATAACATGGCACTACACAAAACTGTCTCAATGTCATCTGTGTTTCGCATC
AATTATGAAGGCTCATTTTGTACAGATGGGACATACCTTATCGGTAGAAA
TTTCGTCGGTAAAAAGTGACATGATTGTGAATGGGATGAGACATGCATCA
ATCCAAACCATAAATGTATTCCTAATTATCAAAATGGAACTCACGAGTGT
GTTTGTCCGTTTCAAACCTACGATGAACATTGTATCTTCGAACTGACAGT
TTTTTATGGATACGCAAATATGGTGGCCCATCAAGGTCACATCCTCAATG
TGACTGCATTACAAACAATTACAATCAACATAACTTCACCTGCAAAATGC
ATTACTAATTGTATCGATGTTGAGAATTGTAACAGTGTCAATGTCATTAT
TGGACAAAATTTGGAATGTCAACTTCTTGATACTGATCGATTCAGAAATT
CTTCATACTTCATGCCACAGACACAATCCACTCACTATGCTATTAACTTG
CTTCGACAAAAACCAAAATATTTTGAAACCAAAGAAAGAATGACTCGCTT
TTGCTTTTCGAAATTTGTTTCAGGGATATTTATGGTGACCTTACCAATTT
ATATTCAAGGTCAACAAATTAGAAGAATATCTGAAATATCTGGCAGAAAT
GATAACATGGCACTACACAAAACTGTCTCAATGTCATCTGTGTTTCGCAT
CAATTATGAAGGCTCATTTTGTACAGATGGGACATACCTTATCGGTAGAA
ATTTCGTCGGTAAAAAGTGACATGATTGTGAATGGGATGAGACATGCATC
AATCCAAACCATAAATGTATTCCTAATTATCAAAATGGAACTCACGAGTG
TGTTTGTCCGTTTCAAACCTACGATGAACATTGTATCTTCGAACTGACAG
TTTTTTATGGATACGCAAATATGGTGGCCCATCAAGGTCACATCCTCAAT
GTGACTGCATTACAAACAATTACAATCAACATAACTTCACCTGCAAAATG
CATTACTAATTGTATCGATGTTGAGAATTGTAACAGTGTCAATGTCATTA
TTGGACAAAATTTGGAATGTCAACTTCTTGATACTGATCGATTCAGAAAT
TCTTCATACTTCATGCCACAGACACAATCCACTCACTATGCTATTAACTT
GCTTCGACAAAAACCAAAATATTTTGAAACCAAAGAAAGAATGACTCGCT
TTTGCTTTTCGAAATTTGTTTCAGGGATATTTATGGTGACCTTACCAATT
TATATTCAAGGTCAACAAATTAGAAGAATATCTGAAATATCTGGCAGAAA
TGATAACATGGCACTACACAAAACTGTCTCAATGTCATCTGTGTTTCGCA
TCAATTATGAAGGCTCATTTTGTACAGATGGGACATACCTTATCGGTAGA
AATTTCGTCGGTAAAAAGTGACATGATTGTGAATGGGATGAGACATGCAT
CAATCCAAACCATAAATGTATTCCTAATTATCAAAATGGAACTCACGAGT
GTGTTTGTCCGTTTCAAACCTACGATGAACATTGTATCTTCGAACTGACA
GTTTTTTATGGATACGCAAATATGGTGGCCCATCAAGGTCACATCCTCAA
TGTGACTGCATTACAAACAATTACAATCAACATAACTTCACCTGCAAAAT
GCATTACTAATTGTATCGATGTTGAGAATTGTAACAGTGTCAATGTCATT
ATTGGACAAAATTTGGAATGTCAACTTCTTGATACTGATCGATTCAGAAA
TTCTTCATACTTCATGCCACAGACACAATCCACTCACTATGCTATTAACT
TGCTTCGACAAAAACCAAAATATTTTGAAACCAAAGAAAGAATGACTCGC
TTTTGCTTTTCGAAATTTGTTTCAGGGATATTTATGGTGACCTTACCAAT
TTATATTCAAGGTCAACAAATTAGAAGAATATCTGAAATATCTGGCAGAA
ATGATAACATGGCACTACACAAAACTGTCTCAATGTCATCTGTGTTTCGC
ATCAATTATGAAGGCTCATTTTGTACAGATGGGACATACCTTATCGGTAG
AAATTTCGTCGGTAAAAAGTGACATGATTGTGAATGGGATGAGACATGCA
TCAATCCAAACCATAAATGTATTCCTAATTATCAAAATGGAACTCACGAG
TGTGTTTGTCCGTTTCAAACCTACGATGAACATTGTATCTTCGAACTGAC
AGTTTTTTATGGATACGCAAATATGGTGGCCCATCAAGGTCACATCCTCA
ATGTGACTGCATTACAAACAATTACAATCAACATAACTTCACCTGCAAAA
TGCATTACTAATTGTATCGATGTTGAGAATTGTAACAGTGTCAATGTCAT
TATTGGACAAAATTTGGAATGTCAACTTCTTGATACTGATCGATTCAGAA
ATTCTTCATACTTCATGCCACAGACACAATCCACTCACTATGCTATTAAC
TTGCTTCGACAAAAACCAAAATATTTTGAAACCAAAGAAAGAATGACTCG
CTTTTGCTTTTCGAAATTTGTTTCAGGGATATTTATGGTGACCTTACCAA
TTTATATTCAAGGTCAACAAATTAGAAGAATATCTGAAATATCTGGCAGA
AATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013923XLOC_013923Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024785-exon-sc0000510-1575043694:144759..144913TCONS_00024785-exon-sc0000510-1575043694:144759..144913Clytia hemisphaericaexon
TCONS_00024785-exon-sc0000510-1575043694:144156..144403TCONS_00024785-exon-sc0000510-1575043694:144156..144403Clytia hemisphaericaexon
TCONS_00024785-exon-sc0000510-1575043694:133330..133459TCONS_00024785-exon-sc0000510-1575043694:133330..133459Clytia hemisphaericaexon
TCONS_00024785-exon-sc0000510-1575043694:128579..129267TCONS_00024785-exon-sc0000510-1575043694:128579..129267Clytia hemisphaericaexon
TCONS_00024785-exon-sc0000510-1510915933:144759..144913TCONS_00024785-exon-sc0000510-1510915933:144759..144913Clytia hemisphaericaexon
TCONS_00024785-exon-sc0000510-1510915933:144156..144403TCONS_00024785-exon-sc0000510-1510915933:144156..144403Clytia hemisphaericaexon
TCONS_00024785-exon-sc0000510-1510915933:133330..133459TCONS_00024785-exon-sc0000510-1510915933:133330..133459Clytia hemisphaericaexon
TCONS_00024785-exon-sc0000510-1510915933:128579..129267TCONS_00024785-exon-sc0000510-1510915933:128579..129267Clytia hemisphaericaexon
TCONS_00024785-exon-sc0000510-1491911889:144759..144913TCONS_00024785-exon-sc0000510-1491911889:144759..144913Clytia hemisphaericaexon
TCONS_00024785-exon-sc0000510-1491911889:144156..144403TCONS_00024785-exon-sc0000510-1491911889:144156..144403Clytia hemisphaericaexon
TCONS_00024785-exon-sc0000510-1491911889:133330..133459TCONS_00024785-exon-sc0000510-1491911889:133330..133459Clytia hemisphaericaexon
TCONS_00024785-exon-sc0000510-1491911889:128579..129267TCONS_00024785-exon-sc0000510-1491911889:128579..129267Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024785-proteinTCONS_00024785-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000510supercontigsc0000510:128579..144913 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.507613	0.573606	0.711363	0.698318	0.514106	0.323548	0.327126	0.597845	0.871475	0.778597	0.927405	0.494325	3.06326	2.39672	1.15875	1.17057	0.704321	0.694163	6.15641	7.53585	0.640898	0.495496	0.242219	0.285176	0.601633	0.201354	0.336159	0.358758	0.310978	0.396046
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024785 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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