TCONS_00024854 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024854
Unique NameTCONS_00024854
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1902

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024854 ID=TCONS_00024854|Name=TCONS_00024854|organism=Clytia hemisphaerica|type=transcript|length=1902bp
GTGATAGTCTGGGGGACTGAAGAAAAGAGAAGCGAAACTTTACAAGATGG
ATGGCTATGCAATTAATTTGGTAATGTATATTCAAAGTATCATTATTTTC
TTAAGCCTACAACAATATACCGTGTATGGAGCAATCAAGACGAGTGTCTC
AAACACAACAGTTGGTAGCACTCAATATATTGTTAAGAAAACAATGTTCA
AGAAATATCCTAACTTGATGCCAGCATCGACAGCAAACAATTAtcaaagt
attaatcaagagatTACAAACGCAACTACAAaaaaatgcgGCACATTTTG
TTATCAGGAAAACGACTGCTGGAGTTTTTTATTCTTCCGTTCCAAAACTC
CACCCACCTGCACACTTCTTGATGGTCCAATCGATCGAACACATATGGAC
CAGAACATAACTGTGGACTATTACGAAGTTTGGAATCAATGTTCATCGAA
CGACAGCATTTGCAATTTGGGTGTATGCGTTCCAAATTACGTCACCGATT
CGTACACTTGTCACTGCCCGTCTACCTACACCGGTCAACATTGTCAAACA
TTAATTTCCCAAAGTGACGCCACAACTACATCGCAACCCAATGCCCAAGC
TACAGAACAGTTAGGCACCGAGTACACATGCAGTAACAATCCAGTTGTCA
TTGATACCTACGCAGCAGGGACAACCAGTTGGAAATTAGAAGTCACTTTC
ACATTCGAAAGGCTTGTCAAAGGAGTCActttctttgaaatgaaatatta
taatggtaattttaataaattcttTGCATTGCAATTGAGAACGCCGGCAA
AAAAACTAAGGATGGGAGACCTTaacgaaaacaattttttttttgacttt
gagcTAACCACAAAAGGTTATTTTATTCCAACGACaaacactttttacaa
aattgtACTCCATTTCGAGCCTAGTTTAACTGCACCCTCATCTTTTCACT
ACCAACTAAAAGATGGGACAGAAACTTCGCTGTCAGAAGGTACGTTTCCC
ATGAGTGTCGGTGGAGATTTGGGGGAACTCAGATTGTATAATGGAAACAG
TTTGGACGAAGACCACGTGGATAAAGGTTTTGGCGGCAAAATCTGGACCA
ATGGAATACAAGCTGCATAATATCTCTACTATTGATTACAACAGAcaata
tacagggtgtcccgaaaaaaagtatcgagttcgaaaATGATTCTGAGCAG
AAGATTGTtgttagcctgggaatccaagctcataatcttagaaaaaacaa
aaaatacctcacctcacaaagttctaagattatagagcttggtgcaggta
gattagtctgataACGAATGTTATAAACactctgtgtgtgaacccttgtt
gacggactttctgaactttggaattcaaggcaaacacacataatcaactt
accataaaaactctttcacaagctctaaagactttcaaaactactacact
aaaaaccacatcagcctcatgtatttagacttccatccaacagccatttt
gtttgtaaatgaatctatattttcattttcatttgttttccttttttctg
cagagtcagcttctTCTATAAATTATGCACGCGcgtcgaaattatcaaaa
tacgcgcgaaagtactgctaagtaatacgcacaAAATCTGGCCAATCAGA
atgaacctgcattgcagggaaaaatctccctgcaggcgagttacctgccc
caagcgttaaacaagtagcaaaaatatcataaactagactgtgaacaaag
gttaacgcttggattcccaggctagattGTTGTgtgtgtgtttaacaaaa
tgtaagaaaatatataccaaacacaataattgtttttacaaaacagtcat
tatgattaaaaagaattaactttctttacaattttcatgacgttaaagtt
at
Run BLAST on NCBI

protein sequence of TCONS_00024854-protein

>TCONS_00024854-protein ID=TCONS_00024854-protein|Name=TCONS_00024854-protein|organism=Clytia hemisphaerica|type=polypeptide|length=357bp
MDGYAINLVMYIQSIIIFLSLQQYTVYGAIKTSVSNTTVGSTQYIVKKTM
FKKYPNLMPASTANNYQSINQEITNATTKKCGTFCYQENDCWSFLFFRSK
TPPTCTLLDGPIDRTHMDQNITVDYYEVWNQCSSNDSICNLGVCVPNYVT
DSYTCHCPSTYTGQHCQTLISQSDATTTSQPNAQATEQLGTEYTCSNNPV
VIDTYAAGTTSWKLEVTFTFERLVKGVTFFEMKYYNGNFNKFFALQLRTP
AKKLRMGDLNENNFFFDFELTTKGYFIPTTNTFYKIVLHFEPSLTAPSSF
HYQLKDGTETSLSEGTFPMSVGGDLGELRLYNGNSLDEDHVDKGFGGKIW
TNGIQAA
Run BLAST on NCBI

transcript from alignment at sc0000512:44509..49919+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024854 ID=TCONS_00024854|Name=TCONS_00024854|organism=Clytia hemisphaerica|type=transcript|length=5411bp|location=Sequence derived from alignment at sc0000512:44509..49919+ (Clytia hemisphaerica)
GTGATAGTCTGGGGGACTGAAGAAAAGAGAAGCGAAACTTTACAAGATGG ATGGCTATGCAATTAATTTGGTAATGTATATTCAAAGTATCATTATTTTC TTAAGCCTACAACAATATACCGTGTATGGAGCAATCAAGACGAGTGTCTC AAACACAACAGTTGGTAGCACTCAATATATTGTTAAGAAAACAATGTTCA AGAAATATCCTAACTTGATGCCAGCATCGACAGCAAACAATTAtcaaagt attaatcaagagatTACAAACGCAACTACAAagtaaagttttaaagaaat ttttaattaaatgCTATAGTTCTATAGTATTGTGGATGAGTTAAGTTTAA CCGTATCAAAGAACCGGCCTGGAGGCAGCAAAACCGAATATTCTTACTTT GTTCTTAAtactttggccatcgaagccttctgttcttatatagttttttt aaataagaaaacgTGTATCACGAGTTTGAAACATTAGATGAAGATCGAGG GTTAAAGTCAAAAGAATCAATAAAATTAAtagtaaaatcaataaaatcat gTACGTttttaaatcaatgaaaattaaataagaTGGGTATGTTCAACGGT CAAGGAGATATTTTTCAAGatagcagaaatgcactgtaaaggaAGACTTT TTATGCACTGTTAGGGTAGAAACTTCAGcaaatcgaaaaaaaacttttgc ccaaatattctgattttttttctcctctaaaaaagataaaaatttgacaa aaatgcactgtaagggtatgaatttcacaatttttgcTGTACTTTTTGCG GGTACGATtctaaaagtcaatttttttcgccgcacataccatCACTTGGT ATACCAACTGCCCCCACCCCTGTGATGAAAAGCTGTCTGAAAGTCTCAAT GTCTGAAAGACTCAAATTTGCAAAATCTCAAGAATTCTTTGTTGCAAGAT TACTACTATTCTTACAGGGAGGGGTTTCAAACATTCTTAACAACTTAAAC AGCTCTTGGATATCATCGAGCATTCCCCCAAATAGCAGCAAATTTATATT GTACCCCCCTCTCTCATTCTTAACAACTTAAACAGCCCTTGGATATCATC GAGCATTCCCCAAACACCAGCAAATTTATATTGTACCCCCCTCTCTCATT CTTAACAACTTAAACAGCTCTTGGATATCATCGAGCATTCCCCCAAATAG CAGCAAATTTATATTGTATCACCCTACCCTTTAAAACTTTTCTTGAAGTT TGAACCCCCCCTATGGATGTGAGatgaaatgttttgaaacaGTTGTTTGT AATAAATCCTGTAAAATTTGTTTGCTTGATTCTGAAATGGTTCCACCATT CTGTATTTCTATAATTCTTTCCACCTAGTTATTNTGCTTGATTCTGAAAT GGTTCTATCATTCTGTATTTCTTTAATTCTTTCCACCTACTTATtcatta atattttctttcagaaaatgcgGCACATTTTGTTATCAGGAAAACGACTG CTGGAGTTTTTTATTCTTCCGTTCCAAAACTCCACCCACCTGCACACTTC TTGATGGTCCAATCGATCGAACACATATGGACCAGAACATAACTGTGGAC TATTACGAAGTTTGGGTAAGATCAATTTAGACAGCCAGCGTTTTGTCTTC CATTCTTACTGTTGATGAAAATCAGTTGATTGCGTTGCATTATTTTGACA CTAAAGATCAATCAGACCAGCAATGGCAACATCAAATCTTTTACAAGATT CTAAATTTTTGATGCAAATTCTAACAATTAGAAAATAAAAGGACAAAAAG TCTGCTGTCTATAACTATCTATCATCAATACCGGNTTTGATGCAAATTCT AACAATTAGCAAATAAAAGGACAAAAAGTCTGCTGTCTATTACTATCGGG CTAGcttatagaaaaatatttaagaacGCATCTATCCTAATCTTTTAGCT TTATCCAAAAGCTTTATTAATGAAAAAATTGTCTTCACATTTTCAGAATC AATGTTCATCGAACGACAGCATTTGCAATTTGGGTGTATGCGTTCCAAAT TACGTCACCGATTCGTACACTTGTCACTGCCCGTCTACCTACACCGGTCA ACATTGTCAAACATTAATTTCCCAAAGTGACGCCACAACTACATCGCAAC CCAATGCCCAAGCTACAGAACAGTTAGGCACCGGTAAGAAATAAAAGTAA TTAATATAAAGAtgataaaaaaacatataaataaGAAAGAAATCAGGACT TTGACTATCAATGACAAGATATCTCGTTTCGTCATCGATGTCGGAGCCAA AAATGACTGGAAGAGTTACTGGGAATTCAAATAATTCCAGAACAAAAAAG GTAAATTAGGggcttttctaagcactttttttGTCGGAATACCGGCCAAA ATACTCAAGATTGAGTTCATGAAACATATTATTTTCTATGATAAACAGTG GAGTTTCTTATTGGCGGACACTTTTGAGGAGAAAGGGTAGTGTCCgttaa tcagaggtgtccgcctatTTGGGACTTTAGATTAGCAGACACCAAGGTGT CGCAAACCTAATATTTTGATCCTAAATGATTTCTTGAGATACAGTGTCAC AAAAGGAAACATCTAAAGATTATTGAAACAAaggaatttattttcttttt atcgtcaacatgaaaaatatgagcaatctgattggctaaaaacgcgtaca taagtgctgtatttcatattgtgccgtacaaatacaagaccACGTTaaaa aggggtctggtaagcTAGAAATCGTATCTTGAACTTTCTTACCGAAATTT ATTCCcagaaatgtttttgttttccactcgtttctttaatatttttcaag ttgacgataaaccagttatcacactttCACTCGTACAATATTGGATATAA TTTTCTCGTTCAGAGTTTTCTAGTTTGACGAAAATTCTAAACTCGAAAAT TGTACTCTGTACCGTGTGATAAATATTATTAAATTATAAGAAAATGTCca atatcttttgaaaatttgatacaAAGCCAATACTGAAGtcgtgaaaaaga aattcagtttcaagaaaattattttacaaCTTCTtattaaacaagtgata cttttatggacctacctggttatgcatttaacacatatataattgatatc tacNatttgcccaaaaatatttttttcgaaaatcgggctccgtcacattc gagggtttatagttatgcatctttgtgcgaAAAAATCATGAAGattgaaa gagccaatctcgagaaaagctaatacctaagtaattaataatgtgcttat aaaaaaatttcgaatttggccagtttttaaaaaaaaacacgccaagcaac caaaatttcatgtctaaacacacaaaagtaagccctcatgagcaaaaaaa aacatctatctcataaaagaaattgagtaatttgactaagagcatcgatg tatgcttattaatagtgattcttatagataaacatgcgttttttgagcca acaaaatttttttgcaaaaatctgcttgattttgaattgaaattaatgat tcaatttttcacaaagtccaaaaaacccgttttttagcctttttttggCC CATAttggcccaaaatttttttttttttgaaaatcgggctccgtcgcATT Ctgcccaccaccattttgcacctttgtaccaaaaatcaaaggattcctat gattcaatcctgagaaaagttggtgacagacgaacgaacgaacgaacgaa cgaacagacgaacacaggttaatttataggacctctaccccaccagggta ggtccaataaaacAGAGGTTCCACTGTAGAAAGGAGATGCACCTCTTATC CAGATCATGTatagtaaaaaaagaattttttcgaaatcgcgCTTGCGCGG CGGGGAGAGGGAGGAAGttgttatttattttgtttgaaaataccAATGAT GGTAGATACATTAAATGATGCCCTTAAACAATTATACCCTGATCTGTTAN GGGAGGAAgttgttgtttattttgtttgaaaatacaAATGATGGTAGATA CATTAAATGATGCCCTTTGTATATCATGATCTGTTATAACtcgtaaaatt tactttttctctCTATTCCATATTCATAGAGTACACATGCAGTAACAATC CAGTTGTCATTGATACCTACGCAGCAGGGACAACCAGTTGGAAATTAGAA GTCACTTTCACATTCGAAAGGCTTGTCAAAGGAGTCActttctttgaaat gaaatattataatggtaattttaataaattcttTGCATTGCAATTGAGAA CGCCGGCAAAAAAACTAAGGATGGGAGACCTTaacgaaaacaattttttt tttgactttgagcTAACCACAAAAGGTTATTTTATTCCAACGACaaacac tttttacaaaattgtACTCCATTTCGAGCCTAGTTTAACTGCACCCTCAT CTTTTCACTACCAACTAAAAGATGGGACAGAAACTTCGCTGTCAGAAGGT ACGTTTCCCATGAGTGTCGGTGGAGATTTGGGGGAACTCAGATTGTATAA TGGAAACAGTTTGGACGAAGACCACGTGGATAAAGGTTTTGGCGGCAAAA TCTGGACCAATGGAATACAAGCTGCATAATATCTCTACTATTGATTACAA CAGAcaatatacagggtgtcccgaaaaaaagtatcgagttcgaaaATGAT TCTGAGCAGAAGATTGTtgttagcctgggaatccaagctcataatcttag aaaaaacaaaaaatacctcacctcacaaagttctaagattatagagcttg gtgcaggtagattagtctgataACGAATGTTATAAACactctgtgtgtga acccttgttgacggactttctgaactttggaattcaaggcaaacacacat aatcaacttaccataaaaactctttcacaagctctaaagactttcaaaac tactacactaaaaaccacatcagcctcatgtatttagacttccatccaac agccattttgtttgtaaatgaatctatattttcattttcatttgttttcc ttttttctgcagagtcagcttctTCTATAAATTATGCACGCGcgtcgaaa ttatcaaaatacgcgcgaaagtactgctaagtaatacgcacaAAATCTGG CCAATCAGAatgaacctgcattgcagggaaaaatctccctgcaggcgagt tacctgccccaagcgttaaacaagtagcaaaaatatcataaactagactg tgaacaaaggttaacgcttggattcccaggctagattGTTGTgtgtgtgt ttaacaaaatgtaagaaaatatataccaaacacaataattgtttttacaa aacagtcattatgattaaaaagaattaactttctttacaattttcatgac gttaaagttat

Coding sequence (CDS) from alignment at sc0000512:44509..49919+

>TCONS_00024854 ID=TCONS_00024854|Name=TCONS_00024854|organism=Clytia hemisphaerica|type=CDS|length=4296bp|location=Sequence derived from alignment at sc0000512:44509..49919+ (Clytia hemisphaerica)
ATGGATGGCTATGCAATTAATTTGGTAATGTATATTCAAAGTATCATTAT
TTTCTTAAGCCTACAACAATATACCGTGTATGGAGCAATCAAGACGAGTG
TCTCAAACACAACAGTTGGTAGCACTCAATATATTGTTAAGAAAACAATG
TTCAAGAAATATCCTAACTTGATGCCAGCATCGACAGCAAACAATTAtca
aagtattaatcaagagatTACAAACGCAACTACAAaaaaatgcgGCACAT
TTTGTTATCAGGAAAACGACTGCTGGAGTTTTTTATTCTTCCGTTCCAAA
ACTCCACCCACCTGCACACTTCTTGATGGTCCAATCGATCGAACACATAT
GGACCAGAACATAACTGTGGACTATTACGAAGTTTGGAATCAATGTTCAT
CGAACGACAGCATTTGCAATTTGGGTGTATGCGTTCCAAATTACGTCACC
GATTCGTACACTTGTCACTGCCCGTCTACCTACACCGGTCAACATTGTCA
AACATTAATTTCCCAAAGTGACGCCACAACTACATCGCAACCCAATGCCC
AAGCTACAGAACAGTTAGGCACCGAGTACACATGCAGTAACAATCCAGTT
GTCATTGATACCTACGCAGCAGGGACAACCAGTTGGAAATTAGAAGTCAC
TTTCACATTCGAAAGGCTTGTCAAAGGAGTCActttctttgaaatgaaat
attataatggtaattttaataaattcttTGCATTGCAATTGAGAACGCCG
GCAAAAAAACTAAGGATGGGAGACCTTaacgaaaacaattttttttttga
ctttgagcTAACCACAAAAGGTTATTTTATTCCAACGACaaacacttttt
acaaaattgtACTCCATTTCGAGCCTAGTTTAACTGCACCCTCATCTTTT
CACTACCAACTAAAAGATGGGACAGAAACTTCGCTGTCAGAAGGTACGTT
TCCCATGAGTGTCGGTGGAGATTTGGGGGAACTCAGATTGTATAATGGAA
ACAGTTTGGACGAAGACCACGTGGATAAAGGTTTTGGCGGCAAAATCTGG
ACCAATGGAATACAAGCTGCATAAATGGATGGCTATGCAATTAATTTGGT
AATGTATATTCAAAGTATCATTATTTTCTTAAGCCTACAACAATATACCG
TGTATGGAGCAATCAAGACGAGTGTCTCAAACACAACAGTTGGTAGCACT
CAATATATTGTTAAGAAAACAATGTTCAAGAAATATCCTAACTTGATGCC
AGCATCGACAGCAAACAATTAtcaaagtattaatcaagagatTACAAACG
CAACTACAAaaaaatgcgGCACATTTTGTTATCAGGAAAACGACTGCTGG
AGTTTTTTATTCTTCCGTTCCAAAACTCCACCCACCTGCACACTTCTTGA
TGGTCCAATCGATCGAACACATATGGACCAGAACATAACTGTGGACTATT
ACGAAGTTTGGAATCAATGTTCATCGAACGACAGCATTTGCAATTTGGGT
GTATGCGTTCCAAATTACGTCACCGATTCGTACACTTGTCACTGCCCGTC
TACCTACACCGGTCAACATTGTCAAACATTAATTTCCCAAAGTGACGCCA
CAACTACATCGCAACCCAATGCCCAAGCTACAGAACAGTTAGGCACCGAG
TACACATGCAGTAACAATCCAGTTGTCATTGATACCTACGCAGCAGGGAC
AACCAGTTGGAAATTAGAAGTCACTTTCACATTCGAAAGGCTTGTCAAAG
GAGTCActttctttgaaatgaaatattataatggtaattttaataaattc
ttTGCATTGCAATTGAGAACGCCGGCAAAAAAACTAAGGATGGGAGACCT
TaacgaaaacaattttttttttgactttgagcTAACCACAAAAGGTTATT
TTATTCCAACGACaaacactttttacaaaattgtACTCCATTTCGAGCCT
AGTTTAACTGCACCCTCATCTTTTCACTACCAACTAAAAGATGGGACAGA
AACTTCGCTGTCAGAAGGTACGTTTCCCATGAGTGTCGGTGGAGATTTGG
GGGAACTCAGATTGTATAATGGAAACAGTTTGGACGAAGACCACGTGGAT
AAAGGTTTTGGCGGCAAAATCTGGACCAATGGAATACAAGCTGCATAAAT
GGATGGCTATGCAATTAATTTGGTAATGTATATTCAAAGTATCATTATTT
TCTTAAGCCTACAACAATATACCGTGTATGGAGCAATCAAGACGAGTGTC
TCAAACACAACAGTTGGTAGCACTCAATATATTGTTAAGAAAACAATGTT
CAAGAAATATCCTAACTTGATGCCAGCATCGACAGCAAACAATTAtcaaa
gtattaatcaagagatTACAAACGCAACTACAAaaaaatgcgGCACATTT
TGTTATCAGGAAAACGACTGCTGGAGTTTTTTATTCTTCCGTTCCAAAAC
TCCACCCACCTGCACACTTCTTGATGGTCCAATCGATCGAACACATATGG
ACCAGAACATAACTGTGGACTATTACGAAGTTTGGAATCAATGTTCATCG
AACGACAGCATTTGCAATTTGGGTGTATGCGTTCCAAATTACGTCACCGA
TTCGTACACTTGTCACTGCCCGTCTACCTACACCGGTCAACATTGTCAAA
CATTAATTTCCCAAAGTGACGCCACAACTACATCGCAACCCAATGCCCAA
GCTACAGAACAGTTAGGCACCGAGTACACATGCAGTAACAATCCAGTTGT
CATTGATACCTACGCAGCAGGGACAACCAGTTGGAAATTAGAAGTCACTT
TCACATTCGAAAGGCTTGTCAAAGGAGTCActttctttgaaatgaaatat
tataatggtaattttaataaattcttTGCATTGCAATTGAGAACGCCGGC
AAAAAAACTAAGGATGGGAGACCTTaacgaaaacaattttttttttgact
ttgagcTAACCACAAAAGGTTATTTTATTCCAACGACaaacactttttac
aaaattgtACTCCATTTCGAGCCTAGTTTAACTGCACCCTCATCTTTTCA
CTACCAACTAAAAGATGGGACAGAAACTTCGCTGTCAGAAGGTACGTTTC
CCATGAGTGTCGGTGGAGATTTGGGGGAACTCAGATTGTATAATGGAAAC
AGTTTGGACGAAGACCACGTGGATAAAGGTTTTGGCGGCAAAATCTGGAC
CAATGGAATACAAGCTGCATAAATGGATGGCTATGCAATTAATTTGGTAA
TGTATATTCAAAGTATCATTATTTTCTTAAGCCTACAACAATATACCGTG
TATGGAGCAATCAAGACGAGTGTCTCAAACACAACAGTTGGTAGCACTCA
ATATATTGTTAAGAAAACAATGTTCAAGAAATATCCTAACTTGATGCCAG
CATCGACAGCAAACAATTAtcaaagtattaatcaagagatTACAAACGCA
ACTACAAaaaaatgcgGCACATTTTGTTATCAGGAAAACGACTGCTGGAG
TTTTTTATTCTTCCGTTCCAAAACTCCACCCACCTGCACACTTCTTGATG
GTCCAATCGATCGAACACATATGGACCAGAACATAACTGTGGACTATTAC
GAAGTTTGGAATCAATGTTCATCGAACGACAGCATTTGCAATTTGGGTGT
ATGCGTTCCAAATTACGTCACCGATTCGTACACTTGTCACTGCCCGTCTA
CCTACACCGGTCAACATTGTCAAACATTAATTTCCCAAAGTGACGCCACA
ACTACATCGCAACCCAATGCCCAAGCTACAGAACAGTTAGGCACCGAGTA
CACATGCAGTAACAATCCAGTTGTCATTGATACCTACGCAGCAGGGACAA
CCAGTTGGAAATTAGAAGTCACTTTCACATTCGAAAGGCTTGTCAAAGGA
GTCActttctttgaaatgaaatattataatggtaattttaataaattctt
TGCATTGCAATTGAGAACGCCGGCAAAAAAACTAAGGATGGGAGACCTTa
acgaaaacaattttttttttgactttgagcTAACCACAAAAGGTTATTTT
ATTCCAACGACaaacactttttacaaaattgtACTCCATTTCGAGCCTAG
TTTAACTGCACCCTCATCTTTTCACTACCAACTAAAAGATGGGACAGAAA
CTTCGCTGTCAGAAGGTACGTTTCCCATGAGTGTCGGTGGAGATTTGGGG
GAACTCAGATTGTATAATGGAAACAGTTTGGACGAAGACCACGTGGATAA
AGGTTTTGGCGGCAAAATCTGGACCAATGGAATACAAGCTGCATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013976XLOC_013976Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024854-exon-sc0000512-1491911889:44509..44790TCONS_00024854-exon-sc0000512-1491911889:44509..44790Clytia hemisphaericaexon
TCONS_00024854-exon-sc0000512-1510915933:44509..44790TCONS_00024854-exon-sc0000512-1510915933:44509..44790Clytia hemisphaericaexon
TCONS_00024854-exon-sc0000512-1575043694:44509..44790TCONS_00024854-exon-sc0000512-1575043694:44509..44790Clytia hemisphaericaexon
TCONS_00024854-exon-sc0000512-1491911889:45973..46123TCONS_00024854-exon-sc0000512-1491911889:45973..46123Clytia hemisphaericaexon
TCONS_00024854-exon-sc0000512-1510915933:45973..46123TCONS_00024854-exon-sc0000512-1510915933:45973..46123Clytia hemisphaericaexon
TCONS_00024854-exon-sc0000512-1575043694:45973..46123TCONS_00024854-exon-sc0000512-1575043694:45973..46123Clytia hemisphaericaexon
TCONS_00024854-exon-sc0000512-1491911889:46505..46691TCONS_00024854-exon-sc0000512-1491911889:46505..46691Clytia hemisphaericaexon
TCONS_00024854-exon-sc0000512-1510915933:46505..46691TCONS_00024854-exon-sc0000512-1510915933:46505..46691Clytia hemisphaericaexon
TCONS_00024854-exon-sc0000512-1575043694:46505..46691TCONS_00024854-exon-sc0000512-1575043694:46505..46691Clytia hemisphaericaexon
TCONS_00024854-exon-sc0000512-1491911889:48638..49919TCONS_00024854-exon-sc0000512-1491911889:48638..49919Clytia hemisphaericaexon
TCONS_00024854-exon-sc0000512-1510915933:48638..49919TCONS_00024854-exon-sc0000512-1510915933:48638..49919Clytia hemisphaericaexon
TCONS_00024854-exon-sc0000512-1575043694:48638..49919TCONS_00024854-exon-sc0000512-1575043694:48638..49919Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024854-proteinTCONS_00024854-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000512supercontigsc0000512:44509..49919 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.876619 0.837846 0.987354 1.76842 0 0 0.951279 1.44261 1.01034 0.57672 0.966496 1.02903 8.38352 7.53377 2.79066 2.82118 1.61321 1.51451 12.5375 13.4396 3.82505 3.86088 1.14856 2.16451 2.61434 5.59092 1.61538 1.47111 1.56494 1.51143
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013032EGF-like_CS
IPR003609Pan_app
IPR000742EGF-like_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024854 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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