TCONS_00025485 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025485
Unique NameTCONS_00025485
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1242

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025485 ID=TCONS_00025485|Name=TCONS_00025485|organism=Clytia hemisphaerica|type=transcript|length=1242bp
TACTGACAATGGTCCAATCGCATTTGATTTTACATCGATGTTCATTGGTC
TAATATGACTTTGAGTCAGCATATAAAAACTATGTGAGAGACGTTCGGAA
GCTTTACTTTTTAATACATTTCAACATCAGAAGATATTTGCGAAATTTTA
GTTTACATTGATTTGAGATGAAGAGCTCATTTGTGTTGTGTTTATTGTGT
TGTTTATATTCAACTTCTTTAATATGGTGCCGAAGTTTGACGTCACAATT
GGATGATGAATTTGAAATCTTTCAAGACACAGTTGAGCTTACAGCAAACC
GCCCTGGACGAGATCAAGGCGACGAATCAAACGACGAGATCGTTGAGCTG
CAACCAGGAGGCCTCCCAACAGAACGCCCAAAATTTGAACCCGACGTTGT
AGAACTAAAAGGTGACGCCCCAAAAGTGTCAAAAGAGTCCGAAGTAATTG
TGGAGCCGGAAGACTTTTATGTTAGACCACGCCTGACAGAGGAGCCTCTC
GTGCTAGGAGACGAACTCGATGAAAAAAttCCCACGACCACGACAACCAC
CGCCGCCCCTGACGCCGCCAACGCTACGACCACTGCCGACACTACGACCA
CTAGCGAGCCATCATATGTATGGAAGAGAAGTGTCGACCCATCTGTCACA
CTGTGGCCACAAACTGTTCCTTATTTCATTGATAGTTCCAtCCAGTCGAC
AATTGAGCCATACATTCGAGCTGCGATCGCTGAAATCGAACAAAATACAT
GTGTTAGTTTTCAAGAGTATAACGAGATGAATTCACCAAAGAATTTCATT
CGCTTTTCCACTGGAGCAGGATTTTCGGCATTCAAAGGCAAACAAACGGG
ACCTGGTTACGACTGGACTGGTCAAATAATCGCCATCCCCTCGCCTTGCG
TCAACTGTGAAGGTTCAACCATTCATGAAATTTTACATACTCTTGGTTTC
GTACATACTCATCAACGTTCCGATCGGGATAACTACGTCACTATCAACAA
TGCTAATATTCAACCTGGCAGACAGAGTAACTTTGACATCGTCCCTGGGG
CAAACACTGGGTCTTTCGACTATGATAGTATCATGGCTTACAAAGGAGAG
GCGTGGTCTTCAAATGGGGGTGTCACCATTCAAGCAACCGACGCGTCAAA
GCAAAACAACATGGGTCAAAGAAATGGTCTTTCTGTAGGAGATATACAGA
AAATCAATGCTTTATACAACTGTTAAAAAGAATGACTTATAC
Run BLAST on NCBI

transcript from alignment at sc0000536:151692..165612-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025485 ID=TCONS_00025485|Name=TCONS_00025485|organism=Clytia hemisphaerica|type=transcript|length=13921bp|location=Sequence derived from alignment at sc0000536:151692..165612- (Clytia hemisphaerica)
TACTGACAATGGTCCAATCGCATTTGATTTTACATCGATGTTCATTGGTC
TAATATGACTTTGAGTCAGCATATAAAAACTATGTGAGAGACGTTCGGAA
GCTTTACTTTTTAATACATTTCAACATCAGAAGATATTTGCGAAATTTTA
GTTTACATTGATTTGAGATGAAGAGCTCATTTGTGTTGTGTTTATTGTGT
TGTTTATATTCAACTTCTTTAATATGGTGCCGAAGTTTGACGTCACAATT
GGATGATGAATTTGAAATCTTTCAAGACACAGTTGAGCTTACAGCAAACC
GCCCTGGACGAGATCAAGGCGACGAATCAAACGACGAGATCGTTGAGCTG
CAACCAGGAGGCCTCCCAACAGAACGCCCAAAATTTGAACCCGACGTTGT
AGAACTAAAAGGTGACGCCCCAAAAGTGTCAAAAGAGTCCGAAGTAATTG
TGGAGCCGGAAGACTTTTATGTTAGACCACGCCTGACAGAGGAGCCTCTC
GTGCTAGGAGACGAACTCGATGAAAAAAGTATGAATTTTCAAATATTTCG
CAATGAAATTATATTCATGATATGCACCATTGCAATGTTCTGACATTACA
TCACAGACCTAATAGCTGATTGGTTGTAAGTGACGTAAAATCAGTCAATA
CGTCACTTGCAACCAATCAGCCGTTGTTTCACGGAAGACATTGCAATGGT
GGATATCATGAATAAAAAAAATCCCTCTTGACTCATTTTCGCGGATGAGA
TCAAAATCTGCGAGAATTAATCCCTGCGAAAATCAATCCCATCAAAGTAG
TAACTACTAAGGCTTTATTCAATACACTCTTCTCGAGATGCATAAATTTA
TTGTTGTCCTCGTTTACAAAGATTTCATTTGTCAGTTTATCATTTTAAGG
GAAAGCAAAGAATGAGAAAAGATTATATGGTGGCTACGAACACTTGAACG
GTCGAATCAGTCCAGTAAGACTTTTCGGTAAGAAATCATTCACAACAGTT
GAAGCCGTTCAAATTACAGTAGAATGTCCATAGCTCATTCATGTGCAGGG
AAATAGAATTTGTTCAAATTGTGGAAACCCCTTTGTATGGGTTTGTTTCC
TGGGGGCACTTGATCTGAAAACTACCCTATAAAACTTGGATTTCTAGTGC
AAAGAAAATTTTACCAAATTCATAAATTTGATACAATGTATACGAAAAAT
TTACCCTTACGATGCATTTTTGGACCTACCCCGGTGGGGTAGAGGTCCTA
TAAATTAACCCGTGTTCGTTCGTTCGTCCGTTCGTTACTAGTAGTCTGGC
TGATTTGTAAAATAAAAGGGGTCAACCTTGAAAAAAATTCCGCACTAGGT
TTCTTGGTACCATTAGAAGCGCAATTTTATGTAGATTAACATACTCAGAG
CCTCACGATGAGGCCCTTGGGCAAAAAACTTTATGAAAACAAACCTGGGG
GGTACTTTTTTGCCCAAAATGCCCTGAATTCGAATTTTCGTAACAAAGTT
GACCTATATGTCATGAACTTTTAAGACCTAAAAAACTGCTTTGATTAAAT
CTTAATTAGAATTTATGAATTGCATTGAAATAAGAACTTCCTAATAATAT
TAAAAATCGGGTTTTTCGGGAAAAACGGGCCATAAAAATCGGAAAAAACT
GCTTAACCTCAATGAATATTGAAAATATGACAAACTAACGCTTATTAATA
ACATGACAGGTTGACAAATCTAATTCTAAACTTCTGAAAGCCAAAATAAT
GGTAAGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCT
TATATTTCGTTGTTTTTTCACACAAAAACATTATTGATAGCAATGCCCAC
CATCAAGCATGGTTTAATTGTCAATAAAAGTGATTTTTGAAGCCAGAACT
TTCTAAAAATCGCCGGAACAGCCTATCTTCGCCGGAAAAACGGTATTTCT
TGAATTTCTCGAACTGTACTTTATATTTTTTCATGAAATTTTGCACACTG
ATGCAAAATGGCAATACCTAAAATATGACAGAGCCTGATTTTCAATTAAC
GTACTTTTCCGGCCGAAAATGCCGGAAATATGCTGGAAAAACCGGTTTTT
TGGCATTTTCTCGAGATTTCATCAATAGTTTTCTCTGATTTTTTGCACAA
AGATGCGCATTAGCAATCGCCAAAACTTGGCCGAGTCCGATTTGTGAGAA
AAATTCATTTCCGGCCGAAAATGCCGGAAATATGCCGGAAATCGCCGTTT
TGCAGATTTTCATTGGACTTTTTCCTAACATTTCTTTGTTTTTTCCCACC
ATCAAGCATGATTCGATTGTCAATAAAACTGATTTCTGCAACCGGAACTT
TCTACATCTTTTTTCCCTTCTCCCCTTCCCTCTCCCCTTCCCTCTCCCCA
TCCCTCTCCCCATCAACAAACAATGATGAAATTTAACGCGTTATGGCTTT
TCGCTAAACATATTTTCTAACGGATTGTTTCCGTTTTTCTCCTTATTGCT
ATCTAACTTTCATCATCAGGTAGGTCCGTTCAGCTTGTTTATCTTAAGGT
ATTGTCAACTGGCTCAAATTGTGTTTTATTAAATGATTGGTCGAAATTGG
TTCTTATCAAATGACCTTACTCAACGGTTAGCTCAGGTAGAGATCAGAAT
GTTGACAAAGCGAATTCGATTGAATTCCTATTAAAAGTTATATTTAACGT
TAACNTTAGCTCAGGTAGAGATCAGAATGTTGACAAAGTGAATTCGATTG
AATTCTTATTAAAAGTTATATTTAATGCTAACAATAAAAGTGACTGTTCG
TTTATAATGCATAATCTAGTACAAGTTAGTATACCAGTAGAAATACTAGA
GAGCTTTAACTAAACTTCGGGCAGAGCCCGAAGTCTAATGTCTTTACTAT
CTGCTCAACCAAGATACGGACTCGAACCATTGAAGAACTGTCTTTTTAGA
ATTGTCTTTTAATTGCCATTAGCTTGACCTTTTCATAGAGGCTGTGCGGA
CCATTATATTGGGTGCTTCGTCTAAATTTGGGACACGTTATGCAACTGCT
TGTTTGATGGGCCATCTAATGCTTTCCGTTTGTTAGGGCCATTAACGGGT
TACGAAAGGGCGATTATGGATTCAGATGGCTATTTCGTGTGGTCTCAAAT
GTTGATTTGCTGAAATCCAATATACAAGATGACCTAACATTAGGTCCTCC
TGACAGTATAAAATGGTCAGATTTTCGCGCAAAAAAGATTCGTTTTTTCA
CTTTTTGCATTACAGTGCACTTTAGGAAGCCTAAAAACGTACCCTTAAGT
GACCCCCACTCGGGTTTTGCTACCTAAGGACTATAAAGCTTGTTTGGAGA
CTCTGCTATAAGTGTTTCCACATTCATTACTTTCCGACACTTAAATCCAG
AATTCATGATATACATCACTACAATGTCTTCGACATACACCATAGACCCA
ACAGCTGATTGGTTGCAAATGACGTATTGACTGTTTTTACGCAACTTGCA
ACTAATCAGCTGTTGCATGGGTCCGTGATGTAATGTTAGAAGACATTACA
ATGGTGCATACCATGAATAGCTTTCTTCAGTTGTCAATAGTACATTACGT
CAGCTTCTCGAGAATTATAGTTGAACGAATATTCGGTAATAATTTCTTGT
AGAAGACCGATTAAGAGGGAAACAAGAAGCCCGTTGGGCGTGAAGACCAA
GCAAAAGTGAAATTTTTGCGCGCGATTTTCGCGAATTTCGGAATTTCTTA
AAATTCCAAAAAATGTTTAACAAGATTTCACATTTCCCCCAGGAAAGGGA
TGGCCAAAAGATTTAAAATTTTACTGCGTCGAACAAAACACAATGAAAAA
TAAGTCAGCAAGGATAATTCTCCCTTTCTTCATTTCTTAGAACAGGGAAA
CGTAGCATCATGGAAAAAGTTCCAATCTTGTTCAAATTTACACATGAGCT
GTATTTTAGTCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAAAAAG
TTCCAATCTTGTTCCAATTTACACATTAACTCCATTTTAGTGTCCATTAA
CAAATTCCAGAATCAGTTTACTTGAAATAATTCTGTGTCGAGCGGTACGT
TGTCGAGTTTGAAAATCATGCCACGTCCCACTGTCACTGTACTGACCGTT
GTTTAACAGCGACAGATCTAGAAGCAACATTGTGTCTTATTTAAATTTAC
ACATTTCAGTTTATTTATTTCTATATTAGAAGCCATTATTTCCTAAAAAT
AAAGTCTTTTTNNNNNNNNNACCGCCATCTTGTTTTGTTTGAAAACATTT
GTTGTTTAAGGAGCGCGAAATCAGAAAATATATCTTTTTTAGCCAGTACC
CGACTTTAGCAAGCTTTTCTCTGTCCAGACGGCAAAAAGTGTGGTACTGG
TATTAAGCGCCGGTTCTCTAAAAAAGGACAGACAGACACACGGAAGGAAG
GACGGAAGGGCAGACAGAGTTGCAAATGAAAGGCCCTATCGCTAGCGCTG
GGCCAATAACATACATATACGTATCTTCACATCTATCTTCGGAAATACTA
TTGCCATCGATAGCAGCTTTCTTCAATAATATTTCTTTCATTTTTAAGTT
CCCACGACCACGACAACCACCGCCGCCCCTGACGCCGCCAACGCTACGAC
CACTGCCGACACTACGACCACTAGCGAGCCATCATATGTATGGAAGAGAA
GTGTCGACCCATCTGTCACACTGTGGCCACAAACTGTTCCTTATTTCATT
GATAGTTCCAGTGAGTTATTTGATATTAAAGGTTTTGTTTTTAAATCAGA
GTGATATCGTTAGCTTACTCATCAAGTTTAATTTACAAGCTTTTTCACAT
TGGATTGACAGGAATGTGGAGCAAGATTGGTCAGAAAAAGGAAAAGAAAA
ATATATTTTTGTTTATATCAGCATGATACAACAATAGGGTGGCACTGTCC
TGATATGAAATTTGTGTCTGATATGAAACGGGAACACTTATGTAAAAATA
AAACCTTTAACGAGTCGAAATTAAGTTTTTTTTGAAATTACTAAGAAAAA
GAAGATTTGAATGTCTTCAAAGGAAAAACTTCATTGCCTGCGGTGTGAAA
GAATGAAATTTTTCGTTAACTTGTTATCAAATTTGGAGAAAAGCTACGCT
AAAAAATCAAATTGGAAACACCAGGCTGAGTGTGAGTGATACTTAGATCG
AATTGTTCTTTATTATTGTTGAAGTATTCATTAAATTTATTAATGTTTGA
TTTTTAGTCCAGTCGACAATTGAGCCATACATTCGAGCTGCGATCGCTGA
AATCGAACAAAATACATGTGTTAGTTTTCAAGAGTATAACGAGATGAATT
CACCAAAGAATTTCATTCGCTTTTCCACTGGAGCAGGGTAAGTTAAGTTG
ACACTTTTGCAATGCCGTAAATAGTATTGTCTGTACACAGACCCAGTATC
ATACGGTTAATTTCAAAATTAATTGCCGTAGAGGGTCTGTTATCATTGTC
TTTTCTCATTTGAGATTTTTCAAACCGACTGCTGCGATGGAGTGTTGGTG
GCAGAAGGGAGAAAATGAGAGAAGTGTTGCTATTTATGAATCATACTTCA
TCGCAGAGGTCTCCGTAAGGGAATTTTTTATCAAACAGACATTGCGCACA
GAGCGTACTACGAAGCGATAAACGTCAGATACACTCTGGTACAGAGTAAA
GATAGTAGAGAAGTAGAGTTTTTTTGAGACCCGATTTTTATTTTCCCATT
TAAACTTATCATATGTTCGTTATTATCGTGTTTTTTTTTAAGAACATCCA
AAATTATTCAGTGAAACATAAAAAACCTTGTGATTTGTAGCCAAATCAAA
ATAAATAATAACACATTTTTCTCCCAAAAATATATTTTTTAACTTTTTGA
GGTTGGTCCCAAAAAAGTTTCTTAGATGCTCTTATTTTCACTACTTTTTG
CAAATATTTTTGTGCAATTTCCTAAGAAACTGGGTGTTTTGAAGCCCATA
AAGTCGAAAAGAAATTCTTAACTTCTTCTTAATATTTTGGCCATCGAAGC
ATTATATGTTCTTATATAGTTAAGTTCGTTCTTATTTATAAAATTGCATC
GTGACACTGCTCTTGTCAAAATACGAAACAAAATCTTGAAATCGTAACAT
TGTTCAATAAGATTACTTTTTTGAACATGTGGGGTGGAGGATGTACCGTA
TCGGGGAAAACTTCGTCGGGGAAAATTTTCGTCGGGGAAAATATTCGTCA
CTTGTCCAAAATTTCGTCACTTTTCCCCGACGAAGTTTTCCACGATAAGG
TATTGGATATTTTGTCGGGGGTAGCGGAAAATCTGCAAAATTTGCATTGT
TTTAGAAACGAACTTACTCTGATTAGAGGCGATTTTGAATGTCCAAGGGA
TGAGATTTCCGTTGTCCGGAGGGGGGTCAATTTTCACAATGTCTAGGGGG
TAAATTTCCAAAAAAATGTTATATCCTCCACCCGTCCACCCCCGTATTAG
ATTTTTTTCTGGAATAGCCCGTTATGAGAATATGTACGAGATTTTTGTTA
AATTCAATAAAGAGTTTTCAACTTCGAAAATTGATGATAGAAAAATAATG
TTTCTTTATTAATGAAGTTATTCCCTTTGAAGTAGTATTGAGCACTCGAA
TACATCTTTTCAACGGTAGTCGCGTGGTCAGGCGCGTCGCACTTTATTAT
TTAATTTACCACCCTAAACTCGATCCAATCCTTTTTTTTACACTTTTTTT
TATTTTCTTTAAGTGTGAAAAAAAGACTGGGGTGGTTTTAGGGTGGTAAA
ATGCGAACAAAAAAATGCCCGCGCGGTAATTGGCGGCTATGGTAAAAAAG
GTGTATTGTGAAGAGACAATTTACAAGAAAATCTCTATCCTTATGTTCAG
ATTTTCGGCATTCAAAGGCAAACAAACGGGACCTGGTTACGACTGGACTG
GTCAAATAATCGCCATCCCCTCGCCTTGCGTCAACTGTGAAGGTAACGTG
TAATTCTTTTCAAATGATTTTCTTTTTTAGACAGATAGACAGACAGACAG
ACAGACAGAGTCGATATTTTACGTCGATAGCCTAGTAATTTAGGACTTTT
AGGCAGTCTTTTAATTCACGGGGTCCAAGCCGGCTTGGCTATCTATGAAC
TGAACGGAACATTGGAAGGAGCGGGGACTGGATGGCACCTTTTATATAGA
AAGGAATCACTTCTCTAGTAGTGACAGAGTTCAATCATCAGAATAAGAAA
AAGAATTTCCCGAATTTTTTGCTCGTGCGGTGCGGAAGGGGAGAAAGTTA
TTCTCTTTCTTTTGTTTAAAACTGCTGAGTAAGGAAATGGTATTTTAGAT
GCGTTTTAAATGATCTCCTTTAAAATATAATTATCCTTTTTTCCTATCAA
AATGTCGGGAAAGTATATCATGATTTCTTTGTTAGGCTTCTTTTTTATTT
TTCCTATTATCAGCACTGGCCTTATTAGGCCATGGCCAGCCCCCTCAAAA
CGTTTCACTTTTTTTTCAAAATACCAGGGAACAAGCTTTGACCATTGATT
TTAGTCAATTTGAGGGTGCTGATTTGGTCATTTTGGCGTAATTTGCGACA
CTTTATGTTTTTAGACAAAAAAATTTTTTTATATATAAAAGAATGTATTT
CCAAGAGCCTTAGTTGACTGGATCTAAAAACGTAAAATGTTAATGTTTTG
ATACAATTTCTTCCTAAAGGAAATGAAAAACAAAATCCCCTATTAATAAA
TCTAAACACTGAAAAAATAATTTACAATCTTACATTTATATGTACAAGTC
CTCTAAGGGTAGATTCGTGTGGGACCTGCTTCCTCTGACACACACATGAA
GACAGATCTGATGATGAGAAAAGAACCTTTAAATCTAATCACACTAACGG
TGTTTCTGGCAATTTAGTCAGCAATATGCTTATGAAAAGTCGAGCATTCC
TTTTCCATCACACCTGTTACGGAGAAAATTAATGGCATGAAGGTTCCTTG
TTCGACGTTCGTGATCTTGTTGTTGTAGTGGTGTTTTTGTTGCTCACACG
GATGTCAAAATAAGTATTTTGGGCTGGCCTTCAGACTTCTCTGGCTCGGA
CATAGGCAAAATGTAAGCTCTGAAAATGAGTTTTGGGGGGCCTTCAAAAT
CAGAAAAGACCTATACTACGTGACAGAGCTCTTCAAACTGAGAAAAAAAT
GTATTACAACAAAGTTTGAGCTATTTTAGATCAAAAGTTACGGGTGTTTT
TGTGGTAAAAAAGTGACCTGGTCTATATAATGTTATTGGAAGGGGCTGGA
GCATTGAGTTTAAAGCCCGAAGGGCTACCGTAGAATCTCTAACCTTTTCT
TGGCAAGAAAAAGTGAAGCCACTTATCCCATCCAGGACGAGCCTAAAACG
CCCCGTAATCATGACGACGGATTGTATCTAGTTCCTTTGTTTTTGAGGAC
TGCATTTTTTGAAATCTAGTGACTTGTATAAAAACCACGCGTGGGTGTTC
TGGATTGGAAATAAGTGGTTTAAGTCTCGTTTAGCCCTTTGTTCAGGCTT
GGAGGTCAATGGATGTGGACCCTTTAGTTTTTTGACATTTCTCAGCACCT
ATTCATGCTATGCTAAAAGATTATACAACGTTGGAAAGATATAATTGATA
AGAAGTACATTTAATGTATACAATGAAGAAGAAAAATAAAGATGTAAAAA
ACTTCAAAAGGGATTGCAGAAAAAATGACGCATGCGCATTATGTTCTAAA
ATTTCAGAACGACATGTGAATGCTATATTCATAGTCATTATAAAAACACT
GGTCTGGAAGGCTTTTGTCTATTTTTATTGTTAAAGGATTGAGCTTACAT
ACCAAAATCGATTTATTTTGCAAACTTTTTGATCATGTGATAAGAAAATA
GACCAATCCCAAGAGAAGATTTTGGTAACGTGATCAAAAAGTATGCAAAA
CACAACTTGTCTTTAACAAAAGAAAATTGAACAAAAAGCTAAAACAATAC
ATTGCCAGACCGGTGTTTTTATAATGACTATGCTACATTTTACAATATCT
CAGGCGTTTGTAACAAAATGTAAATTGCATTGCCTGTACAATCATGTGAG
TGTAATAAAGAACGAGAACAACATTTTTAAATTGTTCTTTTTTGCAACTT
TAAAGTGCCATAAGGGCTTCTATCTTTTGATTTAGAAGATGGTTTTGGTT
ACAGATATCTAAGCCCGAAGGGCTAGATTTGCAACTTTAAGCTTTCTCCA
GCAAAAAAAAGTGAAGCAAAAATTTGACTTTTTAAATTTCGTGCCGATGG
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTC
ACGTGACTCTGGTAGGAAATCCTTCCAAAGATGAGCTTCACTTTTTGATA
AAAGCCGCAAATCTAGCCCTTCGGGCTTTACAGATATCTGTGGTTTTGGT
ACCATTAGAAAGCTATTTTTATACTCTTTCTAAAAGCATTCGGTTTATGC
CCCTTCAAATCAAGTGGTCAGGAGTTATGGCCTCAAGTCTGAGACCCGTC
CCCAATGAAGGTATAAGCCCGAAGGGCTAGAAGTCAATCTCTTTGGTAGG
ATTTGAAGGCAACAAATTCTACCAAAGTTGCGCGGCGTTGCGCGACCCAC
ATGGTTTTTACACAAATGACAGATTGAAACTAAAATTTACCGCTCAATTT
CGAAAAAGATATCACTCGAAAACAAAGGAATTGCTAGATTCAATCTGTCA
TAAAAATACGGCGTATATTTTAAGGCTTCACTTTTTCTTGCCTAAGAAAG
ATTAAAGATTCTCCTCTAGCCCTTCGGGCTTTAAACTCAATGCTCGTCCC
TCGTGGTCTAAGGGTTAAATTGTTCTTTTTGCTTTTCAGGTTCAACCATT
CATGAAATTTTACATACTCTTGGTTTCGTACATACTCATCAACGTTCCGA
TCGGGATAACTACGTCACTATCAACAATGCTAATATTCAACCTGGTATGT
ACTGAGGCTGTTTGCATATTTTTACCTCACAGTATATAGCCCCTTAAACG
CCCCCAAATTTTGCCCACTGGTGCAAATGGCAATACCTAAAATGTGATGG
AGTCAGATTTAAGAGGAAATTTCTTTCCGACCGAAAATGTGCCGGAAAAA
ACGGTTTTTGACCAGCATTTCTTGAGATTTCATTTGTTTTTCTGATTATT
TGCACAAAGATGCCTATTAGCAATACCAAAAATGTGGCCAAGTCCGATTT
TTGAGAAAACAAATTTTACGGTCGAAAATGCAGGGGAAAATATTAAAATT
CGTCTGTACCATTTTTTTACTTTTGTCCCTTGAGAGTGTTACCTATCAGG
ATACAACTAATATTATTATTTAATGCTTATTTTTTTCAGGCAGACAGAGT
AACTTTGACATCGTCCCTGGGGCAAACACTGGGTCTTTCGACTATGATAG
TAAGTGATAATCGCCTTCTTGAGTAGCCTGGAGTCAACTTAAGGCTTTTT
GATAGACTTTATGGCCCGGTAGTATTTGGCAGCTCTTACTACAATTTTGA
GAATTGCTTAGGCGGGCTGTAAAAATAGGATTAAGCAATATTTTGGTCTT
AAATACTGAGAATTGAGACATGGGTATGTCATATACTTAAATCAGATTAG
TTTCGCGAGATCGCTAGCAAAAAAATCATGAAATTTTCTGGATTTATTGT
CGCGTAGCATTTTTAACTGTGAATCAGCCAAACATAAAAAGGGTCTTCCT
TGAAAGTGCCAAATAATGAATGTTCAGGATACACGTTTTTTTTTTATTAG
AACACCTAAAATTTGGCTGAGCCTGGATGTGCTTATTTTTTTAGCAATTT
TCAGCCTGAAATGTTCTTAGATGCGTTCTTAAATTTTCAGACTACTCTAA
ATCGATAATATCATGCAAAATAAAGAGCACTTAAAATTGGTAGAATTTGG
ACAATATTTGACTCTCGATTTAGAAAATCCATCCCTAAGTTTGTTTAAAA
CTGCTTGAAAAGAGGAAAAAGTTGTAGTTTCTTGTCATTTTTTTCCAAAC
TGAGGCTGGGCATGTTCTTACGATGTTCTTAATTTTTCGACGAATTTCAG
CCTCAATGTTCTTATAAATTGGGTTCTAATAAAAGAAAAAACGTGTATTT
TTAAAGTCTAGAATTTGATTTTGAAAATTTTGAGAGTCAGCAATTTCATG
CGAAAACGCAAATAAATTAAATTTCGCGAAAATTAACTTGCTTAGAGTAC
CAAATTGAGACAGAGTTGTAAGTCAACAAGGAACACCTTTTTATTCTTTT
GTTTAGGTATCATGGCTTACAAAGGAGAGGCGTGGTCTTCAAATGGGGGT
GTCACCATTCAAGCAACCGACGCGTCAAAGCAAAACAACATGGGTCAAAG
AAATGGTCTTTCTGTAGGAGATATACAGAAAATCAATGCTTTATACAACT
GTTAAAAAGAATGACTTATAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014302XLOC_014302Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025485-exon-sc0000536-1575043694:165085..165612TCONS_00025485-exon-sc0000536-1575043694:165085..165612Clytia hemisphaericaexon
TCONS_00025485-exon-sc0000536-1575043694:158703..158864TCONS_00025485-exon-sc0000536-1575043694:158703..158864Clytia hemisphaericaexon
TCONS_00025485-exon-sc0000536-1575043694:158076..158205TCONS_00025485-exon-sc0000536-1575043694:158076..158205Clytia hemisphaericaexon
TCONS_00025485-exon-sc0000536-1575043694:156471..156562TCONS_00025485-exon-sc0000536-1575043694:156471..156562Clytia hemisphaericaexon
TCONS_00025485-exon-sc0000536-1575043694:153169..153273TCONS_00025485-exon-sc0000536-1575043694:153169..153273Clytia hemisphaericaexon
TCONS_00025485-exon-sc0000536-1575043694:152714..152773TCONS_00025485-exon-sc0000536-1575043694:152714..152773Clytia hemisphaericaexon
TCONS_00025485-exon-sc0000536-1575043694:151692..151856TCONS_00025485-exon-sc0000536-1575043694:151692..151856Clytia hemisphaericaexon
TCONS_00025485-exon-sc0000536-1510915933:165085..165612TCONS_00025485-exon-sc0000536-1510915933:165085..165612Clytia hemisphaericaexon
TCONS_00025485-exon-sc0000536-1510915933:158703..158864TCONS_00025485-exon-sc0000536-1510915933:158703..158864Clytia hemisphaericaexon
TCONS_00025485-exon-sc0000536-1510915933:158076..158205TCONS_00025485-exon-sc0000536-1510915933:158076..158205Clytia hemisphaericaexon
TCONS_00025485-exon-sc0000536-1510915933:156471..156562TCONS_00025485-exon-sc0000536-1510915933:156471..156562Clytia hemisphaericaexon
TCONS_00025485-exon-sc0000536-1510915933:153169..153273TCONS_00025485-exon-sc0000536-1510915933:153169..153273Clytia hemisphaericaexon
TCONS_00025485-exon-sc0000536-1510915933:152714..152773TCONS_00025485-exon-sc0000536-1510915933:152714..152773Clytia hemisphaericaexon
TCONS_00025485-exon-sc0000536-1510915933:151692..151856TCONS_00025485-exon-sc0000536-1510915933:151692..151856Clytia hemisphaericaexon
TCONS_00025485-exon-sc0000536-1491911889:165085..165612TCONS_00025485-exon-sc0000536-1491911889:165085..165612Clytia hemisphaericaexon
TCONS_00025485-exon-sc0000536-1491911889:158703..158864TCONS_00025485-exon-sc0000536-1491911889:158703..158864Clytia hemisphaericaexon
TCONS_00025485-exon-sc0000536-1491911889:158076..158205TCONS_00025485-exon-sc0000536-1491911889:158076..158205Clytia hemisphaericaexon
TCONS_00025485-exon-sc0000536-1491911889:156471..156562TCONS_00025485-exon-sc0000536-1491911889:156471..156562Clytia hemisphaericaexon
TCONS_00025485-exon-sc0000536-1491911889:153169..153273TCONS_00025485-exon-sc0000536-1491911889:153169..153273Clytia hemisphaericaexon
TCONS_00025485-exon-sc0000536-1491911889:152714..152773TCONS_00025485-exon-sc0000536-1491911889:152714..152773Clytia hemisphaericaexon
TCONS_00025485-exon-sc0000536-1491911889:151692..151856TCONS_00025485-exon-sc0000536-1491911889:151692..151856Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000536supercontigsc0000536:151692..165612 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.578722	0.450578	0.575909	0.494576	0	0.495106	22.8605	29.205	132.32	125.677	66.8509	107.428	0	0.286403	0.253524	0.432824	0.283604	0.290685	0.219053	0.229223	0.391762	0.425982	0.684843	0.628374	0.225902	0	0.235465	0.251294	0.558648	0.732126
Blast
[Close]
BLAST of TCONS_00025485 vs. Swiss-Prot (Human)
Match: ASTL (Astacin-like metalloendopeptidase OS=Homo sapiens GN=ASTL PE=1 SV=4)

HSP 1 Score: 96.2857 bits (238), Expect = 1.086e-21
Identity = 61/188 (32.45%), Postives = 93/188 (49.47%), Query Frame = 3 
Query:  666 VPYFIDSSIQSTIEPYIRAAIAEIEQNTCVSFQEYNEMNSPKNFIRFSTGAGFSAFKGKQTGPGYDWTGQIIAIPSPCV-NCEGSTIHEILHTLGFVHTHQRSDRDNYVTINNANIQPGRQSNFDIVPGANTGS-FDYDSIMAYKGEAWSSNGGVTIQATDASKQNNMGQRNGLSVGDIQKINALYNC 1223
            VP+ + S         I  A+AE E++TC+ F  Y +    ++FI      G  +  G+  G       Q++++   C+    G  +HE++H LGF H H R+DRD Y+ +N   I PG + NF     +N  + +DY S+M Y   A+S  G  TI    A    ++GQR  LS  DI ++  LY C
Sbjct:  104 VPFLLSSKYDEPSRQVILEALAEFERSTCIRFVTYQDQ---RDFISIIPMYGCFSSVGRSGG------MQVVSLAPTCLQKGRGIVLHELMHVLGFWHEHTRADRDRYIRVNWNEILPGFEINFIKSQSSNMLTPYDYSSVMHYGRLAFSRRGLPTITPLWA-PSVHIGQRWNLSASDITRVLKLYGC 281
The following BLAST results are available for this feature:
BLAST of TCONS_00025485 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASTL1.086e-2132.45Astacin-like metalloendopeptidase OS=Homo sapiens ... [more]
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