TCONS_00012434-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00012434-protein
Unique NameTCONS_00012434-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length228

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00012434-protein ID=TCONS_00012434-protein|Name=TCONS_00012434-protein|organism=Clytia hemisphaerica|type=polypeptide|length=228bp
MAPGGQPSHGPQPGFDSVDSDPEDYVRSKDAKQPVTVKFVNKTTSKVKLY
WIDYKGKFKKSGKIKEGRVEVVDSYEGHKFMVEGKKSSDPVINGNEMFIV
RTGHGSHGEVKADITHGPKDIKNLRSAQNGHPVQLKFSNRTHSYATLELI
DQSGHTKHLKDIAPKKAWSFNTFEGQYLVAHEKGKKHEKFALNYGQFWKA
TKPHIPNFVEKVLITEDLDDSSSSSSSD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006982XLOC_006982Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00012434TCONS_00012434Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024053VHL_beta_dom
IPR022772VHL_tumour_suppress_b/a_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024053von Hippel-Lindau disease tumour suppressor, beta domainGENE3D2.60.40.780coord: 116..207
e-value: 1.6E-9
score: 37.4
coord: 16..115
e-value: 8.4E-18
score: 64.0
IPR024053von Hippel-Lindau disease tumour suppressor, beta domainPFAMPF01847VHLcoord: 26..101
e-value: 3.2E-12
score: 46.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
IPR022772von Hippel-Lindau disease tumour suppressor, beta/alpha domainSUPERFAMILY49468VHLcoord: 24..99

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012434-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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