TCONS_00019229-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00019229-protein
Unique Name	TCONS_00019229-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	382

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00019229-protein ID=TCONS_00019229-protein|Name=TCONS_00019229-protein|organism=Clytia hemisphaerica|type=polypeptide|length=382bp
MGTGKNKKLLCVCEICTCGRHHCVHRPKTNKPSGPCALSEYKETYRKFDN
YAPQKPIKPDSATKRSDVPLDARTLYELEYTKHPLEARKKREQAKYVKPG
GNFDGTSSYQHDYTEKSAEKMKSARPPYQPATSDRPFSGTTVHQETYKPW
EVPFTQGIRHQSAIKLPSGKFDHKTTFQKDFTGYPGHAGRQPIIPKGPTL
SMGAGKFSDETTTRRDYTPKDARPEKSARPPQYVLHNTDPFDHKTTFQHN
FPWPKGHPAESCKPQQMVRRSSMPLDGLTTHNMTYKPWEVAKTKGWKPKS
GWVPPQDPFDAKTTFQHDYDGKSSSPARSMRPYYNRMEPGEFADRTTHKD
AFKPWEVNARQSCKPKEAYSPHGRTIIQHHHD

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_010794	XLOC_010794	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00019229	TCONS_00019229	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 314..333
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 358..382
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..235

Blast

[Close]

BLAST of TCONS_00019229-protein vs. Swiss-Prot (Human)
Match: SAXO1 (Stabilizer of axonemal microtubules 1 OS=Homo sapiens GN=SAXO1 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 6.668e-32
Identity = 105/369 (28.46%), Postives = 162/369 (43.90%), Query Frame = 0

Query:   11 CVCEICTCGRHHCVHRPKT--NKPSGPCALSEYKETYRKFDNYAPQKPIKPDSATKRSDVPLDARTLYELEYTKHPLEARKKREQAKYVKPGGNFDGTSSYQHDYTEKSAEKMKSARPPYQPATSDRPFSGTTVHQETYK----PWEVPFTQGIRHQSAIKLPSGKFDHKTTFQKDF--TGYPGHAGRQPI-IPKGPTLSMGAGKFSDETTTRRDYT--PKDARPEKSA---RPPQYVLHNTDPFDHKTTFQHNFPWPKGHPAESCKPQQMVRRSSMPLDGLTTHNMTYKPWEVAKTKGWKPKSGWVPPQDPFDAKTTFQHDYDGKSSSPARSMRPYYNRMEPGEFADRTTHKDAFKPWEVNARQSCKP 365
            C+CE+C+CGRHHC H P    +K   PC LSEY E Y  + +Y P++  KP    ++  +P++  T    ++  H +   K  +  ++V    N D  ++Y+ DY      ++     P +P  S  P S       TYK    PW  P  + +R +   +  S +FD++TT Q D+   G       +P+ +PK     +      D T  +  Y   P + R    A   RP +       PF+  TT + ++    G PA+S KP        MP    T     Y+ W + +     P + +VPP+D  D  TT Q  Y     +PA+S RP     + G F   +T KD +K W     +  KP
Sbjct:    5 CICELCSCGRHHCPHLPTKIYDKTEKPCLLSEYTENYPFYHSYLPRESFKPRREYQKGPIPMEGLTTSRRDFGPHKVAPVKVHQYDQFVPSEENMDLLTTYKKDYNPYPVCRVD----PIKPRDSKYPCSDKMECLPTYKADYLPWNQPRREPLRLEHKYQPASVRFDNRTTHQDDYPIKGLVKTISCKPLAMPK-----LCNIPLEDVTNYKMSYVAHPVEKRFVHEAEKFRPCEI------PFESLTTQKQSYRGLMGEPAKSLKPLARPPGLDMPFCNTTEFRDKYQAWPMPRMFSKAPIT-YVPPEDRMDLLTTVQAHYTCPKGAPAQSCRPALQIKKCGRFEGSSTTKDDYKQWSSMRTEPVKP 357

The following BLAST results are available for this feature:

BLAST of TCONS_00019229-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00019229-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SAXO1	6.668e-32	28.46	Stabilizer of axonemal microtubules 1 OS=Homo sapi...	[more]

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TCONS_00019229-protein (polypeptide) - C. hemisphaerica