Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00021344-protein ID=TCONS_00021344-protein|Name=TCONS_00021344-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1089bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00021344-protein vs. Swiss-Prot (Human)
Match: HERC4 (Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4 PE=1 SV=1) HSP 1 Score: 706.827 bits (1823), Expect = 0.000e+0 Identity = 409/1118 (36.58%), Postives = 629/1118 (56.26%), Query Frame = 0 Query: 3 LYSWGDDSCGQLALQRDSHQNLMNDVDLDDNNRTTPTQTQFDISQRAWKVACGWAHTIIITEDKKAFSCGSNEFGQLGRLGDENTIAQIPYLDSEHVVSAACGSSHTLLLSEKGQVFSFGSNINGQLGVGSENESYVKPLLVEKISINHEVTLISCGKDHCLALCSDGQLYGWGNNEFGQLGFGKKSKKETKPQLITVLQGCPIVHIATGGFHSFALTVSGLVFAWGKNSYGQLGLGNVEDKCYPTKVKLSLPQGQSVRYIACGEEHSVLLTSTGNIFTFGCGSSGQLGHNSFSDEHIPKMVVEL-GSAITNISCGRKHTLCYSITNGSLYAFGLNVKGQLGLGHFNKQNSPMKIKSFWRTFSKTDFINISSTVGQKDDVYFTELEHFFENISQKDVEIGSANTFDNTFMEVIAGGLNTFIVTCPLIEKPRLPTLNHLIERSCLCHLTKQKANQMVERWQTTNATFDEKSRIRRYLAIAFSNQSTLNASFLAQNCTSTSRSE---HGLHPMGIHVSLEKLWQV--TELLEVVKTSVSSSLISSLHNNPADLECLRVYIIIPEILHKMAPEEMAPLGVSFAVAFGGLQLPAKKALIGWWKLLPATFLERIVQCFKWSILELF--------PTERRAPFIQNTLASFDACLKVLKVIHELSEEGDEVLSHASFYIPGLMDKIDIRKDFLSYIENPD---------------GFAFSNFPFVFEVKEKAFMMEYDAELQMRFMVGRAHMMNLNSIASSGFIDFPQS--PYLVLSIRRHHLVQDTLNNILSQNLMDFKKPLKIKFVDEMAEDAGGVKKEFFLLLMRDLLDPKYGMFDFFTETGCIWFKYGSFEGPEMFMLIGVICGLAIYNSIIVDVPFPVCLYKKILGRKTALDDYRYIDPGIYRGLQDMLDYTESDFGDIYDMNFQVMESIYGESQVIDLKAGGKDILVTQENKEEYVDLFLQHKLHKSVSREFEAFKDGFLKVCDGKALHFLHPQELMELVVGSQEYDFNELEKVAEYQGEYYRRHPIIENFWKVFHELTFPLKKKFLAFLTGTSKVSVLGMKHMKFIIQPVSGGEDGSHLPVAHTCFNLLDLPRYPDLDTMRKKLHQAIENSEGFGII 1089 + WG+ S GQL L +D+ P ++ F I++R V CG HT+ + +D ++CG N+ GQLG Q+ LD++++V+ +CG +HTL L++KGQV+++G + +GQLG+ E P ++ +S + ++ ++CG H LAL +++ WG N++GQLG G KK+T PQL+ L G P + +A GG HSF LT+SG +F WG+N +GQLGL + D+ P +K SL + Q + YI CGE+H+ LT G +FTFG G GQLGHNS S E P+ V EL GS +T I+CGR+HT + ++G +Y+FGL GQLG G + + SP +K W ++ +I S E +F K + G +F + G + F CP K ++ T+N + + L + + + ++ T FS+ LN SFLA + R+ G+ + KL Q ++ + V S+ +LI L ++ D+E LR Y+ +PE + + F A L+ K L WW +L +IV+ FK ++ L P+ERR I N+ LKVL+++H ++E+ +++ + FYI + + IDIR D++++++ +PFVF+ + K +++ DA LQM+ + +AH N++S+ F+ +S P L+L +RR ++V D + + +D+KKPLK+ FV E A DAGGV+KEFFLL+MR+LLDPKYGMF ++ ++ IWF +FE ++F LIGVICGLAIYN IVD+ FP+ LYKK+L +K +LDD + + P + R +Q +LDY E D + + +NF + +G ++V +L G D V ++N++E+VD ++ + +KSV+ F+AF GF KVC GK L P EL +V+G+ YD+ ELEK EY+GEY+ HP I+ FW+VFHEL KK+FL FLTG+ ++ +LGMK +K +IQ GGE+ +LPV+HTCFNLLDLP+Y + +T+R KL QAI+++EGF +I Sbjct: 1 MLCWGNASFGQLGLG-----------GIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLS-DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK-SL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDS-------------EEYF---CVKRIFSGGDQSFSHYSSPQNCGPPDDF--RCPNPTK-QIWTVNEALIQKWLSYPSGRFPVEIANEIDGT-----------------FSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQQVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVNLEKAPLKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERR---IFNSF--LHTALKVLEILHRVNEKMGQIIQYDKFYIHEVQELIDIRNDYINWVQQQAYGMDVNHGLTELADIPVTICTYPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSL----FLPVIESVNPCLILVVRRENIVGDAMEVLRKTKNIDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSRLIWFSDKTFEDSDLFHLIGVICGLAIYNCTIVDLHFPLALYKKLLKKKPSLDDLKELMPDVGRSMQQLLDYPEDDIEETFCLNFTITVENFGATEVKELVLNGADTAVNKQNRQEFVDAYVDYIFNKSVASLFDAFHAGFHKVCGGKVLLLFQPNELQAMVIGNTNYDWKELEKNTEYKGEYWAEHPTIKIFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLKLVIQSTGGGEE--YLPVSHTCFNLLDLPKYTEKETLRSKLIQAIDHNEGFSLI 1057 The following BLAST results are available for this feature:
BLAST of TCONS_00021344-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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