TCONS_00026928 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026928
Unique NameTCONS_00026928
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length922

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026928 ID=TCONS_00026928|Name=TCONS_00026928|organism=Clytia hemisphaerica|type=transcript|length=922bp
GTAGGTGTGATTGATGTCTGAGATTTGAGTATTGATGAAATTATGTCGAA
AACATTCGATTTACAATCCCAGTTACCACCCTTACCTCTTCCTACACTTC
AAGATACTTGCAATAAATATCTTGATTCAGTGAAACCTTTTTTGACAAAA
GATGAATTTATGGAAACAGGATTTAAAGTTGAGCTCTTCCAAAATGGAAT
CGGAAAAGAGCTTCACAACAAGTTGATGCAATTAGCAAAACATTCTAAAA
ATTGGgctcaagACAGATGGTATGATAGTTATTTTGATTACAGAGGTTCC
AACCCAATGATGAGTAATATCTCAGGTGGATATGAATCAAGATTTGATTT
TGATCAGCCCTGTCATGGCCTTGTTATAGAGCGTGCTGCCAATTGGATTC
ACTCAATGACGACTATCTATCAAAGAGTGGTTAAACAAGAGGTTCCAGTG
CAAAAGCTTGGACGTCAATTCCCAATGGATATGTCACAATATGCTAACTT
TTTCTGTGGAAGTAGACTTCCTGGTGAAAAGAGAGACACCCTGATGCACA
ATATTCATTTACTACCCCAGCCAGATGGCAGTATGCACGTAGTAGCACCA
AGCAAACACATTGTGGTAATGAAGAATGCTCACATCTTTCATGTCAAAGT
TATTGATGATAACAATGTTATTCTTCATCCGAAAAGCATTCAAAGGCAAC
TAGAAAGGATTCATGAAATTTGCAAAGATTTGGAGGAAGGAGAAGGTGTA
GCAGCACTAACAATGGGCACCAGAGATAAGTGGTACAAGGCTTACAAACA
TTTGTGTATATTGGATCGTCAAAATAAAACCAACATCAACTTGATCAACC
AATCCATCTTTGCATTTGCTTTTGAAGATGTTGAAACTCATAACTTACAA
GAGGTAAGTGATTAAAGACGGT
Run BLAST on NCBI

transcript from alignment at sc0000596:145990..160788-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026928 ID=TCONS_00026928|Name=TCONS_00026928|organism=Clytia hemisphaerica|type=transcript|length=14799bp|location=Sequence derived from alignment at sc0000596:145990..160788- (Clytia hemisphaerica)
GTAGGTGTGATTGATGTCTGAGATTTGAGGTAGGTTATATATATCTATCT
GTTCAGAGGCCCTTCTGATGGAATTTCCTCATTTTCAAAAGAAAAAAGTC
TTGCATTCTAAACCTATGTATGGCTCAAATTTTAGACAGTCTGAGGGAAA
TGTTACGAAAGCATCCACCGTAGGGGGACTTCAAAATATCTGTTCTGAAG
GCCACGTCAGTGTAGACCTAAAGCTCTAAAACAGCATCTAATAACATGAA
AACCAGAATATGATTCTTCAATGGGAATCAAAACTATAAAGTGCACTTAC
AAACATCAATTTGTCAGATATCTAACAAAATTAATAACTGCAACTGTCAT
CATTGACATTAAAACAAATGATTTTCTGTCAAGAGCCTTGTAAACATTCC
AACAACTTCCATCGAAATGATCTATCACAGCTCAGTCTACCATTTTTAGC
GCGGTCCGAGGATTGAGCCGAGACCGCTCCGCGAACTCCTGCGCGGGTGA
AAACTTCAATCTGTCAATCATTTTCTCAAGCGAAGAGGACGCGAAGCGAT
TCTAGCTTTACGATAGTGCCGCGGGACATCAATGGATAGTATTCAATCAT
CATTATCCCTTTATTTTCATTCCTAGAACTTTCGCAAAAAAAAAGGAAAA
ATAGAAAAGGTGTATTTTTTACTGCTCTATTCACATACTGAATTTGAAAG
ATCTTCTATGTGGCGTTTTTTTGCAAACTTCAAAAAACTGATTTTTGTTC
CGCCTTTGTGGGACTTTGGCTTAAGTGCTTGAGTGCAGCATAGGGTACAA
AGTCCAATCATGCGTTTCCCGTAATTTTTATATGAAGAGTTAGGTCTATA
CTGCACGTTCCAGCTGGAAATGGCGGTCTGTTCTTAGCAAACTAAAGAAA
AAAGTCTGCTGGAAAACAGTTGTCTATTCTACTGAAGATTGGGACCAGCT
GGAAAAATATGATCTGTTCTTTCTTACAAAAAAATAGTTTGATATCCAAA
AAATAAGATGTCTAAGAATTTCCTATCTGTTCTGAGGGAATTTCAAAAAA
GTCAAAGAGTCTTTGAGATCTGTTCTTTTCCTTCTGAATGTGGTTGCCTG
GAGTGCCAGCTGAAAATTCTCTATCTGTTCTACAAAACATCTGAAAATTG
TCAATCTGTTCGCACAGATATTTAAAGTTAAACTGTTAGCTGGAAATTAA
GTTTCTGTTCTTAAAAGTCCTTCAATGTCGCGCTGGAATTTAGCGATCTG
TTCTTATAAGATTTTATCAGCCCTGGTAGATAAGAACAGTTAACTCGCAT
AAAATCAATCGCCTGGTAAATTCGTACCTGTTCTGAAAGTTTTTTTACCT
CCTAGCTGGAAAAATATATCTGTTCTGAAGTAAAAATTTCTCTCCTGGAA
AACAAGGAACTGTTCTTAACTTCGGGGAAATCCTTCCAGCTGGCAAATAA
GCAGTGCGTCACAAACAGCCATATAAACAAAAAGTTGTCTTTTTGATTTC
CCAAACATTCGTCTAAAGCGTTCACTTCCACAATAATTTAGGTGATTGCA
ATTTCGTTTGAGACATGTATCACCTTGGGTATAACAAGAATTGATGAAAA
TAGCGTCAATGGGATTATATTTTATAAATGTTTTAATATTTTTATCCCCT
GCTTCGTATTTTTGATAAAATGACGTCACTATTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNATAAAAAATTTAGCCCGAAATCCTTGGGGGATAGGTATTTTTAAA
GGTTGGGGGGGATGCCAAGAAGGGGGGGATCATTTAAGAAGGGGGGGATC
AGACCCCTTTCCGCACTATGACTAGTTGGAATACTTTCTTTTACTCGCGG
GATTGATGGTAACTTTTCATCTTTGTTATTTTAAAAATGAAGCACAACCG
AAAAAAAACGAAACTTCAGAAAGTTGCGTATTTCCAGTGAGTAAACGATT
CTGACAATTAACAAAATTGATGATGATGATTTTTTTTCGGTCGGTTCTAG
TCTTGACCCCTAAACCTGCGCGAGATTGAAGCGTTTGGGTAAACGAGACA
AAACTCCAAAAAAGCTGGTGTTTTGAAGCGCTTCCGTGCGATCGAAATAT
CGCTGTTTGTGACGCACTGATAAGAACATATATTTGCAAATTTTAGGTCA
GTGGCTGCTTCTGATGTTACACAGGAGGATGAGCAGCGGCAACTTAACTG
GGAAAAGTTTTGTAGTAGTTGCTTGAAGGCAGCAGATCTCAAACCTCAAA
TCTATGCGGAAGATATCCTGCGCTCACGCCGCAATTTCCAGACTGGAATT
TTAGGCCAGCTAATTTTTCATAGTTTTTGAAAATTTTAATTTCATTAAAA
AAAGCACCAGTTTATATTTTCATGATGGATATCATCCCCCCTTTGCTTTA
GAAGTTTTGCAGCGCAAATTTTGCTTTGTTTTGTGAGTCAAGTAGGTAAA
AGATATATATATATATAGCGCTTTCCACAGCATAAATTTTTTATATATGC
ATTTCCACGGGATGTGTGACAACGCTAATTGTGACTATAAGGCGGAGGAC
CCTGCCGACGCACCGGACTGTCCGGTGTATTTGTCAAGTGGCAAAAAGTA
TCCTTTCGCTACACCGGACGCAATAAGTCCGGTGTCAGTCCGGTGCTGCA
TACAGGGAATTTTGGACGCCGGACATTTATATGAAACAAAAAATTAAGAA
ACAAAGGACGCACCTGACTTGTCATGTCCGGTGGAAAAAAATTTCCTTCT
CCGACACCGGACATCCAACTTCCTTAAGTCTGGTGTAGAGATTGTCCGGT
GGTAAATAAATTCTCATTTTACACCGGACCTTCGCGTGTCCGGTGTTCGT
TAAGTCTGGTGCGTCGACAGGGTCCTTAAGGCGGCAATCACAAATATCTT
TGTTTCGCGTTGCCCGACCAACTCTCGAAAATTGAGTAAAATTGAATCGG
TGAGTCGGTAAATTTGTCGGAATCTTTCTGTCAATGACCTTCCCTTCGTT
CAAAAATTTTATTATTGCCGGATTTTTGCGAGCAATTTCTAGCGCATTCG
CAGCATTTGGACTTTTTATCATTACATGTGCCATTTTGGGGTCAGAGGTC
ACAGTGTTCAAAGGACATAATTTTAAACCACCCATTACACCCGATTGTTT
TGGCGGCTGGCTGGCTGGCAGTTTTCTCCAAGAATGCACTCTAAAAATGG
ATGGAAAAATGGAAACCTGAAAATTTTTACGACCGACTGACCGACCGACC
GACTCACTTTTTAGACCCAACGAGGACGCGTAATGAAGATATTTGTGATT
GCCACCTAACTGACTAAAATTCCTATATTAGGCGCTGTGGTATAATACCG
TCAACTGCTCCAACTTGGGACTATCTTACGCAACATGGGACGGCCATCCC
ACCACCATTTCACCGAACCTCCAAAGTCATTTGATTTGAGTTTAATGAAC
CGCGTATTAAAAAATACACAATTTCTCTTTCGTATCGAGTAGGCTTTTAA
ATTGAAATATGAAAGAAGTCCGTAGTGGAACACGCGCGAGTGTCCGGAAC
GAAGAAGACCAAATTAGTGGCAAACGATGGAGTGTTTGACGTCACTCACG
CGGCAAGTTACACACTCGCTATTTGTTAATCCCATTGGGCAGTAGGCGGT
TAGGCGTCAGGCGTTCTCTAATTCTCCATTCGGCGTCTGGTCATTTTGAA
TGAAAACAAAAGTTAAAAAAGGCGCGCTATCAGTATATGTTATCTAGACA
TGTTATGACAGAAAGTATGATTGATAAACTTGGTGGAGTTATGAAAACAA
ATTTGTTGTTGATGAGAAAGTAAGTGAAAATACAGGCCAGATATCAACAA
GTCCCATGTTGCGTACACTCGTCCCCAAGTTGGAGCAGTTGACGGTTGTC
AGTCATAGAAATCCTTGCATTTGGACCCATTTGCACAGTTTTCGGCAAAT
GGAACGGGTCGAAAACGATAGTGACGAAAAAACCCTGTGCAAATATATAC
ACTCAATCACTGCGACCCCTTGCATTTACACAGAGTGAAAAATGTCTAAT
TAAAAAATGCACAGATCAAAATTTTAACCCCTAGACAAAAATTTTCTAAA
AAGGCTAAAGAATCTTCTAAAGAAAAATGAAAATGCCATTCGTCTTCTTT
TTATTTATGCCATTTTCATTTTAAAGTTGAGATTCGTTAATTGTCGCGCA
TTTTGGCTAACACGTTCTAGCTCATTTGCACAGGGTCGGAAAAAATCTTT
GAAACTGTTGCAAATGCACACCCTGTGCAAATGCAAGGATTTCCGTGACT
GATAGTGGTCATTGACCTTCAGACTTGGCCATGAATGGCGTGCGAAAGCA
CGCGCACGCGCTGGCACACGCGTAAAATGATTTACGAGTGCGAAAATAAC
ACGCCTAAAAAGGTTAAAAAAAGTCCAAGGCGTGCGATTTAAGCACGCTT
AAAACACTCTTTGAAAATAATAGCACGCGCGTAGTAAAAATTATTCTCAA
CAAAGCAGGTAAACTATAAATAGCTTATATTTGCTTCTCTCTTGTGATTC
CCTTTTTAATGCCCCATACTTTCTACAAATCTCTCTTCTCTTTCATTTGA
AAGTTTTTTTTTCACTTTTGACGTCATAGGTTTTTATCCTACAGATTCGT
GAAAGGCTTCTCTTTTCTCTTTTATTTGATGGTTTTTCTTTTACTTTTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATTATGTC
TGATCTTTCTTTGTGTATACAAGAAAGAAAAATATTTTACTTTGTGTTTA
CACAAGCTTTGCATAATAAATTAGTTAAAGAGTGGTTGGAGACTATTTTT
ACATGAACTTGTTTTTATATTTATAACATCCCTGTCTCAGTGATTCGGTC
CCAGCGTTGTTTTAACGTTCATCTAATGTTCTATGGACATTATGAACGTT
AGATGGACGTTGATATAACGTTGTGTGCTAGCTGAAAATTATTCAATCGT
TATAATAAAGAGAATAAGTTGTTAGTTAGCATTAGCCTGAGAGACTCCAT
ACCACGAGTAGACCCCTTCTGAGGTATACATCTGATCAATTTCTTATCTT
AATTAGTAAATATTAATAGCACGCCATAAAAGTTTTAGGCGTGCTATTAT
TGCACGCCATAATATAAGTTAAGATTTTAGGCATGCGATCGTAGCACACG
CACTGTTTTACTCATGGCCAGGCCTGGACCTTGGTTGCTGCACAGGTGAC
TGAGGTTCGATTCCCACTTGCAGCGGTTCACTTGGCAAGTGAATGAACCT
TCGCCCGGGTCAACCCATGCCATGTGAGGGGAATTGGGTAGTCCTGGGTG
GGGTGTGCTGATGGGGCGCTAATTGAAAGCGTCTACTAAATCTCCTATAT
CAAGATTATGGAAATTGGAGTGCAGGCCGATTATTACTTTCATTTTCAGT
GGTTTCATTTTGGATTTCAAGTCAGCATCTTAGCAACAGGCAAACATAGA
AAATTTTCCTAATCACCCATTTCGATGAAACCAATACCGTCAACTGCTCT
AACTTGGGACGATTGGTCGAAACATGGGACTGTTGCATATATGGTCTGTA
TTTTCACTTACTGTAAAATCGAAAGAGAAATCGTGTATTTTTTAATACAC
CAATCCTTAACTCAAATCAAAAAAACTTTGGAGGTTCGGTGAAATGGTGG
CCGAATTACCGTCCCATGTTTTGTCAGATAGTCCTGGATAGTCCCAAGTT
AGAGCAGTTGACTGTAAAAGATAAAACTTCTCTATATTTCACTTTTTTGC
ACCAATTCTTCAAAATGAAAATATTTAAGATTTTAAGTTCTTCTTTTATT
CAATGATTTTTTACGGCACTTTGTTGGCGATCTAACTCTTGCATCGAATT
TCCACCTTCTTCAGAGAATTGAACATTAGGAATAGTGTACACCATAGGAT
AACGGATCGAAACAAATATTTTCAAAGGTGTTATGAAGGGTGAGATTTTA
TAACCGCCGTGGTACAAGGCACTGAGAGGCCATGCAGTTATTGGAAGTAC
TTCGATTTGTGAAGTGTCTTTACGTCACATAGAACAAAAGAAAATAGCAA
AAGAATAAAGTAATTACCCATAGCCACCATTTTGCAACCATGGGGGATTG
TAATTTTACGGAAATGGGAATCCTCATATCGAATAAAGCATCTTCTGAAA
ATTTCATTCTTCCCCATAAATGCAAAAATAAAAAACAAAGAAAGTTTCGT
TTTCTGATCTTCTTTTTAATCTGCCATGAAGTGTTATAAAATTCCTTATA
GAAAGACACATTCTCCTACGAAGAGGCTTCAAAAAAATGACGTAGAAAAA
AGTTGTGAAAAAGTGTACTGGAGCCTTATCCGGGTGCTTGCCTAGCAGAC
AAATAAGACACAGTGGGTGAGTGAGTCTAGACTACGAAAGGGGCGGGCTA
AAGGAACCTAGGGGAGTAGAACCTAATCCTATTGTAGACAAGTAAGGGAG
ACTATGCAGTTACAATAAAACTAATATTTAATAATGGCAACGCTCTACAA
TCGTGCTACAAATATGAAAAGGATACTTACAAACCTATGTCCTGAGCAGG
TCCGTCGCCGATTGCTGCCGAAACAACACTGAAGTTTAGGAGGGCTGGAC
AGCAATTGCTAAGTTGCTGCCCAGTGGAGCGTGGAAGGCGCAGTTGGGCG
TTAGAAGGGCGCTAGATACGATCAGTAAAGGTATAGCCGAAGGAACTTTA
GTACAAAAGTATGTCATTTTATCTTAACAATTTCGTATAAACTACGTCAC
AACCACGGAGCGCTGACTTTTAGTTTTATGGTCCTTGTTCTCACTCGATT
GGTTTCCGTAATGAAAAAAAAGTCGTTATTGTGAACTTTGAATATGCTTA
AAATCGAGGTACTTCCACTAACTGCCATTGGTGCCAAAAAGAAGGGTCAT
ATGGCATATGAAATATGGCAACCTCATTGGTGGAAATTTATTAAACAGTC
TGCAAAGGAGCGCTGCGAAGCAATCAGTAGAAGAGACCACTTTCGTTTTT
GTTGCAGATTTCAATATAAATTTCTCACAGGGATAACTTATTAATGTGTT
GTGTCAACTTGTCAGCATTGTATTATTGCAAAGGGAAAGATAAAAGAGGT
CAGACTAGCCTAGTTTCTAATCCTGATATAGGAGTTTAAGTCTAGACTGC
CAAGGATCGCTGTCACGGACCATCTACATTAACACGGCAAAACAGTGGGC
CGTTTATTTTCAATTTCCAATAGATTTGATTTTTGCCTGACTCATAGTTT
GAAAATTCTTCTTTCCGACGTTTTATTTGCCAATCGACCGACTGACTCAT
TTGTTTGACCTAAAATTATGTGAACACAAGTTATTTGTTGTGATCACGGT
CTTAACTTATTTTTAAAAATATTTTGAACATCAAAGCCTTTTGTACTGAT
ATAGTTTGTTTGTGTATGTAAGAAACAGTCATCACATAGTGTTTTTCACC
GCTAATTCATAGAGCCAAAATGGTATCGTGTCTAGAAATTGGATATAAAA
TAATATAAACCCTCTCTGGCCACTCTGCACAAAAATGTCAACTACAGGCT
TGATTTAAAAGTTTCACAATCATTAATTCTGTTTATCCTTCTGTTTTTAA
TGCATTATTAAAGGAGGATTTATTCAACCCTATTCTAGGCTTTTAGGGGC
GGCTTAACACTAGGGGGGGAGGCTGTTCCTGTACCACCCATTTAACTTTT
GATCTAGTGTGTCTTTTTGGATGAAATTTGCCACAGATTCTTGTGGAATG
TAAGGTAACTTTTCACCAAATTTTTTTTGATGACACTCATCATGCCCAAA
GTGAGTAAAAACCAAAAATTTCCTTTGTTTTATAAAGAGCTATTGTATTC
TAACAAAGGCTTTAGAAAAAAGAACTTTCCCTGAGTCTAAAATGCTTATT
TTATCCTAAATATTCAATAAATTATAGTTTAAACGATATATTTGACATAA
AAAATGACTTTGTAGTGGAAATGTGACAATTTTTGTCACAACTTACTGTC
AGTAATGTCATCATGCTCAAGGTGTGAAAATTTTTAGGTTTCGATTTTTT
ATTTATTTTGAAGCTAAAAGTTAGAATTTACAAAAAAGTTCATGCCAAAA
ACTCTATTATTTCAGGAGCTATTTAAAACATTAGTTTCGTCCCCGAACAG
AAACAATCCCCCTCGAGTATGAATAAAGTTAATTTAAAAAATTAAGGAAG
ATTGAAGCTCAGGGGAGGAAGTCAGCTGTACCCCATCCATTTTTGGTCAG
TATGCCTAGCCTACTTTTTCAAAGGCCCTGCCCATTAAAAAAATCGTTTG
GCTTGTGTCAAGAAAATAGCTGAATGGGCAGGTCAAAATGTCAAATATCT
CAAAAATGATTGAAATTAACTTTTTCTTTCATTTCATAGTACAACATTAT
ATATTGAATACAAACTTCACAACTTAACTAGTCAATAGTAGTAAGAGTAA
GTAGTTTTGGACCTGAACCTGTTTTCAAATTATCAGTTTAAGCATGGAAT
CATTATAGACACTGTAAAAACAATGATTCAATGATTTTTATCACTTTCTC
ATGCTGAAACCTTGTCCATTAATGGCATTATTGTTCATTGACTTTTCGTA
GCATTTTAATTTCATTTCTCATCAAAACGCACTTATCCAGTTTCCAATTG
AGACTAAGCTTTCCTTCAAGAATCAAACTCAGCTAGTTAATTGCTAATGA
TATGTCGTTATGACGTTTTAAGTTGCAAGAAAGATGCAAAATAACCCTAT
GTAAAAGTTGTCTTTTGCAGGAAAAACCTGTAAATCAATTCTTTTCTGAA
ACAATGGAAAGACAATACTTCGATCTCCACTGTTTTTGTCTCTATAATAA
TTCCATGGTTTCAGTTAGGTTTCAAGATATGTATCTTGAAAAAAAGACAG
AATCCATAAAATGGTGACTCTTATATTGGTATTATTGTTCAATAATGTTG
GTGGTGTAATGAATTTGAATTGATTGAAAATTTTACCAAAATTCCACACC
TCTTTGTGTTCAATCCAATTTATGGCCGGCCCAATTTATATGCGATTATA
GACTTATCCATACTTTCCCGATTCTTAAACTTTCTGTAACTGTGAAAACA
CTAAATTTTTGTCCATGGCTTTTCTCATAGTATTGATGAAATTATGTCGA
AAACATTCGATTTACAATCCCAGTTACCACCCTTACCTCTTCCTACACTT
CAAGATACTTGCAATAAATATCTTGATTCAGGTAAGGTACATTTCATTCA
TTCTCTCGGTTGTTGGTCTCTAATATTTTATTTGTCACTTTTTCCTACTA
AATAATCAAAGAATGTACAATAAAATTGCCTTCATATCAATAATCGTGAT
GTCAGAGTGCTCCTTACATTGATTTGCACAAGACTCGTTTGAAACATGCT
CATCTTGTATAAAATTTGCTTCCAAGAGTTAGTTTATTTGAATTAAAAAT
TTGAATGGCTAGAGGTTAAAAGTACATTGGATTTCTAAACCTTTTTAAGG
AAATAGAAACAGGTTATCCAAAATTTGAGGTAACTCTTGGATAGGAATTT
TATACACGATTAGCATCGTCAAAACATATCAGAGGGGATGCTAGCAGCCA
GTTGCATTCTAGGGTGTCTTTATGTGTGTGCAAAGTGAAAAGCATTGCTG
GTTAAATAAATCCTTCTATTTCTTTTTATAGTGAAACCTTTTTTGACAAA
AGATGAATTTATGGAAACAGGATTTAAAGTTGAGCTCTTCCAAAATGGAA
TCGGAAAAGAGCTTCACAACAAGTTGATGCAATTAGCAAAACATTCTAAA
AATTGGGTATGAAAATCGTATTTGTTCTGATATGTTTATTTTTCAATAAA
ATACAGTGCTCATAACGTGAACCCCACTGGATTCTGAGGGGGGTTGAGGA
TTTTTAATTTTTTTTAAATAGGCTGGGTTTGGGTTGATGAGAAAGTATGG
GTGGGGGTAATCCTATTAAGGGTGACATTTTTCAGGTGGGGGTTTCTGTT
TTTTTCTTCAATTTTTTTACATAATATATACTAGAGAAAAATAAAAAATA
ACAAAAAAAGTAATGCAAGGTAAAATCTCATTTTTCTCTAGTCTAGTCTA
AAAGCTCAAATCCCCCATTTAAATAAAAAAGTCCCATCCCTCCCTATAAA
GCCCTTCATGAAAATTTGTACCCCCCTTGAGGAGGGGAAAAATATTAGCT
AGAAAAATGCCAAACCCCAATCCTTGCTATCCCACTCAAGATTCTTCATC
GAAGTTTTCAATTCTACCTTTCTGTTTTCTTCGTAAATGCCTTTCTTAAA
CTTACAAGAGTTGTTGATTAATATGAATACTTTGAACATGAAAAGTTGGC
TTCTTATTGTAATTAATTAAAGCTGCTTTTAATTCTAAACTATGTTGTTT
TTATACATTTTTAGGCTCAAGACAGATGGTATGATAGTTATTTTGATTAC
AGAGGTTCCAACCCAATGATGAGTAATATCTCAGGTGGATATGAATCAAG
ATTTGATTTTGATCAGCCCTGTCATGGCCTTGTTATAGAGCGTGCTGCCA
ATTGGATTCACTCAATGACGACTATCTATCAAAGAGTGGTTAAGTAAGAT
ATTTTTTTTAAGAAAATTTTTTTTATGACAGAAAAGCATTACTAAATAAG
TGATAAGGATAAAGACAAGGGAAAAGTTAGGGGGAAAAGCTAGAAGGAAT
AATTACAAAGAACATCCCTGGTACTGGCTTATGGAAGTCAGATAATATAA
TTATATCATTCCTATAGACAAGAGGTTCCAGTGCAAAAGCTTGGACGTCA
ATTCCCAATGGATATGTCACAATATGCTAACTTTTTCTGTGGAAGTAGAC
TTCCTGGTGAAAAGAGAGACACCCTGATGCACAATATTCATTTACTACCC
CAGCCAGGTATTCGATTCATATCTTTATATGATGAAATTATTTCTTTTAT
CAATGCTACATACTTTGTTAATACAAAAAAATAAAAAAACTACTTCAAAA
CTTTTGGGTCGGCAGGTTTCAAGGTATAGTAGGGTCGATCGAATGACGAC
AAACCAACATTTTTTAACACCAGCCTGATGAACTAATACAATTTGAAATT
TTCTTTTACACTTTAGATGGCAGTATGCACGTAGTAGCACCAAGCAAACA
CATTGTGGTAATGAAGAATGCTCACATCTTTCATGTCAAAGTTATTGATG
ATAACAATGTTATTCTTCATCCGAAAAGCATTCAAAGGTTTACTTTTTTT
CCTAAGCATTTTTTCTTCTCAGTGTTTACCATGATGAAATTTTGACATCA
AGTTTTCTATTCATGGCAATGTTCTAAAGGTGTATTGTAACCAAATAATA
AAGTTAAAGATATGGGTGTTTCCTGATTGTTTCATCAGTATTATTATCAA
TTTATACATGTATGACATGTTTTAAAAGAATCGATGTGAATTTTTCTTTT
GCCTCGTGATATTAGCAATAACCTTTGGTTCTATGATAATGTATCACTGT
AGTTTTAAGAATTCAAAAGGTAAAGGTTTTCTTACATACATCGGAATGAA
GTTATGAATTGTTGAAAAAAACGCTTCTAAAAGAATAGGTGATCACAGAT
GAATATATTTGTGAAAAGTCGAGTTGAGTTTGTCATATTTCCAAGCAGAA
AACCATCATATTTTCAAAACTATAGATTAGCTTTATCAAGCTTTATCTTT
ATCAATGAAAATTTCAGCATATGGTCTTCACCTGTCAATGTTTAGGCACA
TTTTTTGGTACCTAGTATTTGGGTTTCTATATTTTATATTTGAACTCTTT
TTCTTTTCTGATAAATATCCTAGTTGTAAACTCTTTTAGCTGACTTTCTT
TTATTTATAGGCAACTAGAAAGGATTCATGAAATTTGCAAAGATTTGGAG
GAAGGAGAAGGTGTAGCAGCACTAACAATGGGCACCAGAGATAAGTGGTA
CAAGGTAATAATCATACATATCTTATATCTTACTATACTAAATGGGTTTA
TGAAAAATGTGTGTAATACAAGATGGTAGCAAAGCTGCAATTTCGAATGG
TTTGTTAGGGGGTGATTCGAGTATGAAAGAGGGATTCGTGCAGTTTTGAG
ACAAAAAAATCTTATTGTCTTTCGAATAAGGAGTTGATGATACGTAGTGG
TTTTTATTTCATTTTCATCTATGATTGAGCGCAAAAATTAGCACTACCTT
CCGATAAAACCCCATTCCAATTAAAAGGATTTATGGTTCGAATCGAAGAA
GCCCCTACATACAGTGACTTTTTAACGAAAATAATTCTAACGTCAATTAT
TCGAAAAATCATGTGACGTAAATTTTCGAATTTTAGAAGGCGTGGCACTT
TCTACGAAAAAGTTGGTAAATCTTTTTGATTAATTGGTAAAGTTTTTAAA
TATTTAGTACGCAGATAAAAAACGGAGGTCTTCCGCGCGAGAAGTGGATA
TAAAAATGTTGTCCTGTAAGTTCGGATATGCCCACAATTGTTTTGAAATC
AAAGTATCTATTATTTTGTTTTTGAAGTGCGCCATTTCGACCTCAAATTC
GCAAATACAGCTACATTTTTTATATCTTTTCTATTCTTATACACTGATGA
TACATTTGACGCTCTCAATTTGGCGTTTTACTGCTCAATAAGCTCCCGTT
TTCGATTAAACTAAAATCGCCTTCAAACTTCCTGAAAAAACTCTCATAAT
TGACAGTTTATTGTTCACTAAGCTAATTTTATGGTGAAGATTTCAAGTAA
CATTCTCTCATTCAATTTGAAGCATAAAAAGGTATTTACGAGAAATCTTC
CAACTACTCGATGTACTCCTGTGGTTGATGAAAACTAATTCGAATTCCCC
TTAAAAATAAAGTTAGAGAGCATCAACAATACCATCTTTATCATCCTAAG
GACTTTTGATGCAGAAGTTAAACTGGCGCTTGCGACGACGGGAACCGTCT
AGTAAAACACTAATGCTTTAATAATACAATAATGTTATAATTTAAAACAC
TAGATAGAGCTACTCTGTATTTCCCAAGCAACGGCAGGTGAAACAAAAAC
ATGTGCCATCTTTGGTGAAAGTAGGTCACAGTTCGGTACAATTTATTCAA
CCAAAGCAAAAAAAATCTAAAATAGGCTTAATCGATCAAATTGCCGTCGC
CGAACTATGGTCTACTTATCAAAGATGGTGGATAATTTGATTCAAAAAGA
GACGGATTAGCTCTATCTAGTGTTTTGTATCACAAAACAAAACTCTATAA
AAATCGAATTTTCAAAGAAAGAACACCAGTTGCAAAAACACCATCAGACA
GACAACACACGAGGTTGACAGTGGTAGTTCCCTCACGTAAAAACGCTTAC
CGCGCCCATTGGTTTATCCTTGGAAGCAACACAACATCAACTAACAACAT
CGACAAATAACAACTTATACAAGCAACTATAATTTTAAGAAGTATACAAA
AACAACACCATATATCAGATCCTTTTCATCGTCCAATATATAGTGTTTTA
TATAAGATAGCTGTGGTAATAATGTGAGCAAACAAGGTCAATTTTTCCTA
AAAAGACTTAATCGCCTTGAAGTTCTATGTTAAGAACGTTAACATCCCCT
TTCCAGTTTCTTTGATAAAATAAGGATCACTTATAATGTGTCCTAAATTA
ACTATTCAGATTTTTTATTAATACAAACCATTTATTAATTACATAGCAAT
TATCTTCATTAGTTAAATTTATTTTGGTTCAGAGAAAACATGTAGTAAAT
TCCAACTATTGAGTCAGTTACCTATACCTTATTACCTCTACAATATAGTA
CTTCTTGTTTTTACAGGCTTACAAACATTTGTGTATATTGGATCGTCAAA
ATAAAACCAACATCAACTTGATCAACCAATCCATCTTTGCATTTGCTTTT
GAAGATGTTGAAACTCATAACTTACAAGAGGTAAGTGATTAAAGACGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015120XLOC_015120Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026928-exon-sc0000596-1575043694:160760..160788TCONS_00026928-exon-sc0000596-1575043694:160760..160788Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1575043694:150708..150808TCONS_00026928-exon-sc0000596-1575043694:150708..150808Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1575043694:150133..150257TCONS_00026928-exon-sc0000596-1575043694:150133..150257Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1575043694:149346..149524TCONS_00026928-exon-sc0000596-1575043694:149346..149524Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1575043694:149032..149171TCONS_00026928-exon-sc0000596-1575043694:149032..149171Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1575043694:148702..148822TCONS_00026928-exon-sc0000596-1575043694:148702..148822Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1575043694:147985..148078TCONS_00026928-exon-sc0000596-1575043694:147985..148078Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1575043694:145990..146122TCONS_00026928-exon-sc0000596-1575043694:145990..146122Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1510915933:160760..160788TCONS_00026928-exon-sc0000596-1510915933:160760..160788Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1510915933:150708..150808TCONS_00026928-exon-sc0000596-1510915933:150708..150808Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1510915933:150133..150257TCONS_00026928-exon-sc0000596-1510915933:150133..150257Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1510915933:149346..149524TCONS_00026928-exon-sc0000596-1510915933:149346..149524Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1510915933:149032..149171TCONS_00026928-exon-sc0000596-1510915933:149032..149171Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1510915933:148702..148822TCONS_00026928-exon-sc0000596-1510915933:148702..148822Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1510915933:147985..148078TCONS_00026928-exon-sc0000596-1510915933:147985..148078Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1510915933:145990..146122TCONS_00026928-exon-sc0000596-1510915933:145990..146122Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1491911889:160760..160788TCONS_00026928-exon-sc0000596-1491911889:160760..160788Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1491911889:150708..150808TCONS_00026928-exon-sc0000596-1491911889:150708..150808Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1491911889:150133..150257TCONS_00026928-exon-sc0000596-1491911889:150133..150257Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1491911889:149346..149524TCONS_00026928-exon-sc0000596-1491911889:149346..149524Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1491911889:149032..149171TCONS_00026928-exon-sc0000596-1491911889:149032..149171Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1491911889:148702..148822TCONS_00026928-exon-sc0000596-1491911889:148702..148822Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1491911889:147985..148078TCONS_00026928-exon-sc0000596-1491911889:147985..148078Clytia hemisphaericaexon
TCONS_00026928-exon-sc0000596-1491911889:145990..146122TCONS_00026928-exon-sc0000596-1491911889:145990..146122Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000596supercontigsc0000596:145990..160788 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.47755	1.76292	1.44973	5.16502	7.89657	5.83953	8.21182	0.176259	8.88178	12.4964	10.8477	10.1055	13.8146	5.61961	19.074	29.8432	17.9235	18.1052	7.42383	12.5602	8.33579	8.2266	3.75606	3.01103	9.31376	5.05842	3.88412	1.68193	3.80112	2.07604
Blast
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BLAST of TCONS_00026928 vs. Swiss-Prot (Human)
Match: OCTC (Peroxisomal carnitine O-octanoyltransferase OS=Homo sapiens GN=CROT PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 6.613e-38
Identity = 86/264 (32.58%), Postives = 145/264 (54.92%), Query Frame = 1 
Query:  103 DTCNKYLDSVKPFLTKDEFMETGFKVELFQNGIGKELHNKLMQLAKHSKNWAQDRWYD-SYFDYRGSNPMMSNISGGYESRFDFDQPCHGLVIERAANWIHSMTTIYQRVVKQEVPVQKLGRQFPMDMSQYANFFCGSRLPGEKRDTLMHNIHLLPQPDGSMHVVAPSKHIVVMKNAHIFHVKVIDDNNVILHPKSIQRQLERIHEICKDLEEGEGVAALTMGTRDKWYKAYKHLCILDRQNKTNINLINQSIFAFAFEDVETH 891
            ++  KYL+SVKPF  ++E+ +T   V+ FQ+GIG++LH KL++ AK  +NW ++ W + +Y D R  + +  N +G       +  P  G  +ER +  +      +Q + K++VPV K+G   P+DM+Q+   F   ++PG  RD++M+  +   + +G     +P+ HIVV+     F   VI +   ++ P  + RQL  IH+ C    +G G+AALT   R +W KA ++L  LD +N   +  I  S+  ++ ED   H
Sbjct:   30 ESLKKYLESVKPFANQEEYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRIPSQLNVNFAGPAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVPVHKVGNT-PLDMNQFRMLFSTCKVPGITRDSIMN--YFRTESEGR----SPN-HIVVLCRGRAFVFDVIHE-GCLVTPPELLRQLTYIHKKCHSEPDGPGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVYSMEDSSPH 284
The following BLAST results are available for this feature:
BLAST of TCONS_00026928 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OCTC6.613e-3832.58Peroxisomal carnitine O-octanoyltransferase OS=Hom... [more]
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