TCONS_00022535-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022535-protein
Unique NameTCONS_00022535-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length238

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022535-protein ID=TCONS_00022535-protein|Name=TCONS_00022535-protein|organism=Clytia hemisphaerica|type=polypeptide|length=238bp
QRKKYNRKIKINKKMEIKEACLSYSIVSLVYQITIITIMYLCNISPISSK
SITTFLMVFIPLSMIGCYVLIKLLHSKVSSIKKRKDSFSEVMLLVFTLAS
FLAGSVLFHVVSILLGAPLIENVDETFSFSMLCSALTVVPLFITHDGRWD
DFLSYLPETTYVQDSLSDCIKMVSAFTVIGAWAGAFPIPLDWDRDWQTWP
ITCCIGALSGQIVGLCFSILSCVGVIPSSPPNWKNKIT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012632XLOC_012632Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022535TCONS_00022535Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009580GPI_biosynthesis_protein_Pig-F
Vocabulary: Biological Process
TermDefinition
GO:0006506GPI anchor biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0005789endoplasmic reticulum membrane
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006506 GPI anchor biosynthetic process
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009580GPI biosynthesis protein Pig-FPFAMPF06699PIG-Fcoord: 38..217
e-value: 8.3E-38
score: 130.2

Blast
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BLAST of TCONS_00022535-protein vs. Swiss-Prot (Human)
Match: PIGF (Phosphatidylinositol-glycan biosynthesis class F protein OS=Homo sapiens GN=PIGF PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.836e-23
Identity = 59/148 (39.86%), Postives = 79/148 (53.38%), Query Frame = 0 
Query:   76 SKVSSIKKRKDSFSEVMLLVFTLASFLAGSVLFHVVSILLGAPLIENVDETFSFSMLCSALTVVP---LFITHDGRWDDFLSYLPETTYVQDSLSDCIKMVSAFTVIGAWAGAFPIPLDWDRDWQTWPITCCIGALSGQIVGLCFSIL 220
            SK SS+  +   F +  +       FL     FHV+ +L GAPLIE   ETF F+++ S  T VP   L   +   W    S    T+  ++SL   I  +S+F  +GAW GA PIPLDW+R WQ WPI+C +GA  G + GL  S L
Sbjct:   68 SKRSSLSHKVTGFLKCCIY------FLMSCFSFHVIFVLYGAPLIELALETFLFAVILSTFTTVPCLCLLGPNLKAWLRVFSRNGVTSIWENSLQ--ITTISSF--VGAWLGALPIPLDWERPWQVWPISCTLGATFGYVAGLVISPL 205
The following BLAST results are available for this feature:
BLAST of TCONS_00022535-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PIGF9.836e-2339.86Phosphatidylinositol-glycan biosynthesis class F p... [more]
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