TCONS_00028222-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00028222-protein
Unique NameTCONS_00028222-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length171

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00028222-protein ID=TCONS_00028222-protein|Name=TCONS_00028222-protein|organism=Clytia hemisphaerica|type=polypeptide|length=171bp
MEIDMGEHASILYGTHYPNKIFVGCLPARITAASLGEYFGCFGEVIEAKV
VLDDAKKSKRFGFVSFSRATDAKTVLSAGDFYMLGKRIVVGPAVKREFKE
RVADEAVKIVMAQEAVIEHNPPRRFVYRPLKQEIDDLPIPPQQTPQCPLP
ANNGSFYYPLFFDPNFGFFYH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015977XLOC_015977Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00028222TCONS_00028222Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 20..91
e-value: 1.8E-15
score: 67.4
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 21..87
e-value: 4.3E-11
score: 42.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 19..101
score: 14.539
IPR000504RNA recognition motif domainSUPERFAMILY54928RNA-binding domain, RBDcoord: 18..97
NoneNo IPR availableGENE3D3.30.70.330coord: 15..97
e-value: 4.6E-16
score: 58.3

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028222-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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