TCONS_00028410 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028410
Unique NameTCONS_00028410
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1604

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028410 ID=TCONS_00028410|Name=TCONS_00028410|organism=Clytia hemisphaerica|type=transcript|length=1604bp
aaaaaaaattaaaaaaaattaaaaaaatattatctaTTGAAAATGTCCAT
TAACAATAAAGGCAATAAAAACACTAGACATGTACCTCATCAACCGGCAT
CAAATCACCATAGCAACACGGCAACAACAAACTACACAGCAGACCATGTA
CCTCATCAACCGGCATCAAATCACCATAGCAACACGGCAACAACAAACTA
CACAGCAGACCATGTACCTCATCAACCAGCATCAAATCACCATGGCAACA
CGGCAACGATAAACTACAAAGCAGACCATGTACCTTATCAACCGGCATCA
AATCACCATAGCAACACAGCAACAACAAACTACAAAGCAGACCATTTTGC
ACCAATCCACCAACACAACTGTGGTAGAGCCAATCGTTCCCAACTACCTG
AAGAAATTCGTCACACAAAACCACACCACCACCACGCCCCTTACTACCAT
CATAAACACCATTATCACCATGACAACGTTTCCCACAATGTACCGCTATT
AAAACAACACGAATCATCACCAAGTCACCATAGCAACAGATATGGTGAAC
TGTTAAGTTTGATTGAAGATTTTGGTCAAGAATTAAAACCCACTTATGCT
GGTAGTAAATTGGCTCAAGAACGACTCAAGaaagGTATTATGCATGCTCG
AGCCTTGGTCAGAGAATGTTTGGCAGAAGTTGAGAAACATGCGGCTCCTC
ATCAGTGATTTCTCAATTTGGAAGATGTATGTGGATCGATTCGGAAAGAT
ACTATCGTAAAGGGGCtttttatcaaCATGTCTGCAATACAGCTCGAAGT
TTGGGATTACATCATTTTTGGTTTGATGTTGTTATTGTCGTCAGTGATTG
GTTTATATCATGGTTACCaaagcaacaaaaacaaaagagatTCCAAAGAT
GACTATTTATTGGCTGGTCAAAGCATAAGCTGGTTCCCACTCTTTATTTC
TCTGGTTGCATCTTACTTGTCAGCTATAGCCTTGCTTGGAATTCCAAGTG
AAATTTATACATATGGTGGAATGTATATTGTAATTATGATGTCTTACCCA
TTGTTCATCTTTCAATGTCTTGTCATCTATGCACCCATATTCAGACGAAG
TAAAGTCACGAGTGCCAATGAGTACCTAGAAAAAAGATTCCATCCGGCAG
TTCGTGTTTTTGCAGCCATTTTGTTCATCAAAGAATATGTTTTATACCTA
GCCGTTGTACTGTACGCTCCAAGTCTAGCGCTGCAAGCAGTGGCAGGTGT
TCAGATGGAGATTTCATTGGTGACAATTGCTGTTGTTTGTACCATATACA
CAACCATTGGTGGTATGAAAGGAGTGATATGGACAGACGTATTTCAGACG
TTCATTATATGCGTCGGTTTAGTTGTTGTCGTTATTATCGGGTCGTCGGA
AGTCGGTGGAATACAAAACGTCTTTGAAATTGCTGAACGTGGAGGAAGAA
TGAACATTCTTGACTTCAACCCTGATCCACGTGTCCGGAACACATTTTGG
TCTTTTGTCTTTGGTGGGATGTTTAGCGCCATGCCTGTATACTGTGTTGG
TCAAATGATGGTACAACGGATCATGTCCgccaaatctgaaaaaactgtTC
GAAT
Run BLAST on NCBI

transcript from alignment at sc0000676:162456..174187-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028410 ID=TCONS_00028410|Name=TCONS_00028410|organism=Clytia hemisphaerica|type=transcript|length=11732bp|location=Sequence derived from alignment at sc0000676:162456..174187- (Clytia hemisphaerica)
AAAAAAAATTAAAAAAAATTAAAAAAATATTATCTATTGAAAATGTCCAT
TAACAATAAAGGCAATAAAAACACTAGACATGTACCTCATCAACCGGCAT
CAAATCACCATAGCAACACGGCAACAACAAACTACACAGCAGACCATGTA
CCTCATCAACCGGCATCAAATCACCATAGCAACACGGCAACAACAAACTA
CACAGCAGACCATGTACCTCATCAACCAGCATCAAATCACCATGGCAACA
CGGCAACGATAAACTACAAAGCAGACCATGTACCTTATCAACCGGCATCA
AATCACCATAGCAACACAGCAACAACAAACTACAAAGCAGACCATTTTGC
ACCAATCCACCAACACAACTGTGGTAGAGCCAATCGTTCCCAACTACCTG
GTATGAATAAATTATTCCGATTTTGTTTTAAGGATTTTTCCAGTTACAAA
CTTAAGGATAAATTTATGGGTATAATTTAGATTTTGACTTGTTTATCATG
TAATCTTGACTCGTTTTACAAACTGGTGCTAGCTTAACTTCAACCTTCAA
CAATCGGAATAGGCTATAAGAATCATAATTTGAATTACTATAGTGTAGGT
TTGATTAACATAACATTCTTCTACGTTTAGGATAGCATGGTGACACAAAC
CAGTCCAAATCTAAATTGGACTCCTTTATGCTCTCAACTTCAAATGAGCT
AGAATCTAGTAATGTCTGTCTATTAGTTAGGGCTCTGTGTGTGTCACAAT
ACCCAAGTTTATTCAATTATTCAAATATTCAAAAATATCTTATTGGGCCA
ATGATCAAATGATAAAAAGTATTGTCAGAAGCTTTTTTTTGAAAAAAAAA
CTGTGGGTTCGACTTTCACAACACAATAAGTTACCGTCAGAGTGTAAAAA
TCTATCAACAGAAATCGTTATAATTGGCTAATACAATTCGAAGGTTCCAA
ATAAACGGCCCCACCCCCGCTTTCTCATTTTTCGAAAATTTAACAACCCT
CCCCCCCCGGACCTTATTAGGATCCCCACGTTTATAAATTTTTAAGAATA
TTTTCAGCTGTCAAAGAGAAGGCCCCTTATTTTGCTCTAAATAGCCTAAT
TTTAGCCTATATTTATCTTTTTTTTGGGTTTTCGGAAGTACAATTTCCAA
CCCCGGCAATTGGCCCCCCCGTTTATTTGGAACCTAAGAGTAAATGTAAA
GAATGTTTTCATGAAGAGTGTATAACTTCTTATCTTACTCCTATTATCTC
TTATTTTTTATCTATTCCAGAAGAAATTCGTCACACAAAACCACACCACC
ACCACGCCCCTTACTACCATCATAAACACCATTATCACCATGACAACGTT
TCCCACAATGTACCGCTATTAAAACAACACGAATCATCACCAAGTCACCA
TAGCAACAGATATGGTGAACTGTTAAGTTTGATTGAAGATTTTGGTCAAG
AATTAAAACCCACTTATGCTGGTAGTAAATTGGCTCAAGAACGACTCAAG
AAAGGTTTTTTGGATTTTCTTTATGATACACAGTTTGGATTTTGGTGCCC
CCTATTAAAAGTAAAATATCTTTGTTAATATGACGTGAGCGAAGCGAGCA
CGAAAATTTTTGATTATATTTTTTTCTGTCTGGCTGAAAACTGCTGATTT
TAGTGTGTCAAAAAGCAAAGTGGCGCCAAAATTAGTCATTAGAGATGCCT
TTCTCCCCGCCCCTTGCCACCATGCTACTGTACTGGGGCAAACATTCTCC
TCTCTCTTCACGAAATTTGACANACACCACCACCACGCCCCTTACTACCA
TCATAAACACCATTATCACCATGACAACGTTTCCCACAATGTACCGCTAT
TAAAACAACACGAATCATCACCAAGTCACCATAGCAACAAATATGGTGAA
CTGTTAAGTTTGATTGAAGATTTTGGTCAAGAATTAAAACCCACTTATGC
TGGTAGTAAATTGGCTCAAGAACGACTCAAGAAAGGTTTTTTGGATTTTC
TTTATGATACACAGTTTGGATTTTGGTGCCCCCTTTTAAAAGTAAAATAT
CTTTGTAAATATGACGTGAGCGAAGCGAGCACGAAAATTTTTGATTATAT
TTTTTTCTGTCTGGCTGAAAACTGCTGATTTTAGTGTGTCAAAAAGCAAA
GTGGCGCCAAAATTAGTCATTAGAGATGCCTTTCTCCCCGCCCCTTGCCA
CCATGCTACTGTACTGGGGCAAACATTCTCCTCTCTCTTCACGAAATTTG
ACAACAAATCGACCATCTGATCTTAAAGTCAATACAATGCTTTCTATTGA
CATTAATACACCAACTTCTTTCAATCTTTTTGTAGAAAGACTTGGTGAGA
ATTAATGATTTCTGTAGAACTGCTGTTCGTTTTCGTTCCATTCCTATGAT
CTGTAACTAAAATTTAAATCCCTATACAATGACTTCATTAAGGCCGGTCT
CCACTTTCGCGCGACATAAGCGAAAACTTTTTGACGTTTTTGTAAGGTGA
TTGGTTGGTTGAAAAATGAAGCAATCCCATTGGTCGAAATTGACGTAACG
GATGAAAAAAGTAGTACTTTCTTCAACTTTTTTTTTGTTCGCGCGAAACT
TTTTTATAACGTAATCTTTNAACTTTCTTGAGTGTGATAAATTGCGTGGG
TTGCGTGCATTCGTGGGTCGGAAAAAAATTCGTGGGTCCACAAAAAAAAT
TCGTGGGTCCATGAAAAAAATTCGTGGGTCCAAAAAAAAATTCGTGGGTC
GGAAAAAAATTCGTGGGTCCACAAAAAAAATTCGTGGGTCCATGAAAAAA
ATTCGTGGGTCCATGAAAAAAATTCGTGGGTCCAAAAAAAAAATTCGTGG
GTTCACAAAAAAAAATTCGTGGGTCCATGAAAAAAATTCGTGGGTCCATG
AAAAAAATTCGTGGGTCCAAAATAAAAATTCGTGGGTTCACAAAAAAAAT
TCGTACCGCTAACTTTGTGTTTGCCACCAGTTTTGGGATTAAAGGAATAG
ATAATATTACTCGTGTAATGCATAACTGTTAGAATTGCTTTCAAAATCCA
ATGAAACTGTCATACAATGAATGAAATTAATTACTCTTTTCCCTTAATCC
CAAAACTGGTGACAAGTCACAAAATTAACTGGAGATCTCATTTTGTTCCG
GATTGGTGAATATCATGACACCCCTGTTTCACAGACCCGGTGGGACCCCT
ACCCACTGAAAATTCAGGCCCAAAAAATCTTCCCCGGTGAACAAAAGCAT
AGAAACTGAAAAAAGGCTCATATCCCCATTGAAAAATGTAAAAAATCTTT
AAATCCCCACTAAGCTTTGATCGACTTGTCTCACCCCCACCAATATTTCG
AACAAAGAACGATAGAAAAAAAAGAAAAAAAAAACCGTTTTGGATAACCC
CGTTGGATTTTATGTCTCTTTATTTATAACCACAAATTATGTCACATTAT
TATTACGGCGTTTCTCATTTCGTTGAATTTTTTTCTGAACCCACGAATTT
TTTTCATTGGACCCACGAATTTTTTTAGTGAACCCACGAATTTTTTTTTT
GGACCCACGAATTTTTTTCATGGACCCACGAATTTTTTTCATGGACCCAC
GAATTTTTTTTTTGGACCCACGAATTTTTTTTGTGAACCCACGAATTTTT
TTTTGGACCCACGAATTTTTTTTGTGAACCCACGAATTATTTTTTTGGAC
CTACGAATTTTTTTCATGGACCCACGAATTTTTTTCATGGACCCACGAAT
TTTTTTTTTGGACCCACGAATTTTTGTCATGTACCCACGAATTTTTTTCA
TGGACCCACGAATTTTTTTTTTGGAACCACGAATTTTTTTCATGGACCCA
CGAATTTTTTTTGTGAACCCACGAATCTTTTTCATGGACCCACGAATTTT
TTTTGTGAACCCACGAATTTTTTTTTTGGACCCACGAATTTTTTTTGTGA
ACCCACGAATTTTTTTTTTNCTAAATGTCAGAAAGAAAAATCGATTTCCA
TCCTATTTTTTCCTTCCCATTTCTTCCTTCCAATTTTCACCCTAAAAAGT
TGCCAAAATGAGTAGAATTAGACTAAAAATCGAAAAAATTTCTAATTTCC
ACCCTGAAAATTGTCAAAAATTACCAACAGTCGACCCTGTCAGATACACA
TCTTGAAAGTTAGTAAATTTGGAACCCTGNTGAATTTTTTTTGTGGACCC
ACGAATTTTTTTCCGACCCACGAAGGCACGCAACCCACGCAATTTATCAC
ACTCAACTTTCTTCAACTTTTTTTTTGTTCGCGCGAAACTTTTTTATAAC
GTAATCTTTTCTTCAGGCAAAAAAGGTTGAGAAATAACTGTCTCTCATTT
CGCGCGAAAGTGGAGACCGGCCTTTAACCAAGAATGGATCAAAGGTAAAG
CTTCCTGGCACCTTCATAAACATGCTCTTCTCTCTTATAGGTATTATGCA
TGCTCGAGCCTTGGTCAGAGAATGTTTGGCAGAAGTTGAGAAACATGCGG
CTCCTCATCAGTGATTTCTCAATTTGGAAGATGTATGTGGATCGATTCGG
AAAGATACTATCGTAAAGGGGCGTAAGAGACTTCATTTCTGTACAATATT
TTATTTGGACTTTCATTGGTGCTGTTTTTTAAATCAGAAAACTAAGTAAA
CGATGTAAAATAAATGATACCCTCCCGGGAGACACTGACCTCTGTGACGA
CCGACAAGGACGTTCTGCTAGAGTTTTAAAAATGGACCCTGACAGATATG
AATATTTGGTAAATGTCAGAAAGAAAAATCGATTTCCATCCTATTTTTTC
CTTCCCATTATTTCTTCCTTCCAATTTTCACCCTAAAAAGTTGCCAAAAT
GAGTAGAATTAGACTAAAAATCGAAAACATTTCTAATTTCCACCCTGAAA
ATTGTCAAAAATTACCAACAGTCGACCCTGTCAGATACACATCTTGAAAG
TTAGTAAATTTGGAACCCTGTCAGATATTTTCAGAGTCTACAAAGGGACC
CTAACCAGCAGCACGTCCCCGTACCCAATTTTGCCTAAGTGTCCCACCCC
CCGGGATGCCCTATTGCGAATCCCCTATATCGTAGTTATCGAATCAATGA
ATTTTGAATTCCAAACAATGTTGACGGTATTTTGAAAACTAGTTGTGGTT
TCTTAGGTGGAAGAGTCTTTTAGCAACATTTCTTTGGTTTAAAAAGATTT
GTCCCAATATTCTGTTTTTATTTATAAACTTTTTTATTTGTTGATAGTAA
GTTAATAATTTGTAATTATATTTCTTTAAACTTATTTGTAAATACTGTAA
TCAGATTTTGTTAATAAAACATCAACTACATTTCGAGAAAGGACGCGACA
TTGTGACATTTGAAGGTTTGGAAACACTTATTTATTAAAATAGTTAATAT
AGTGTTGTATACACCATTTCTTTTTCAAGAACATAAGGCTTTGATGGCCA
AAATATTAAGAAGTAGTTAAGAATATTAGGCTTAAAACTAGCTGATTTTT
TTGTTTCCACAAAATGCAGACCTTGTTGTTGATAAATTTTGACATAGGAG
TGCTTGGTTTCTGGGAAAATCATAGTGTCTGACATTTTATACCACTCCTA
CGCACCTCTTGACACTTTAAAGTAAACATAGGCTATTTACATTTACTAAA
GTACCCTTGCTAAACATGCATGAAAATGTTGAAAGAATGTGTGTAGATCA
ACTTGTATCTATATTCTACAGACGTTTCAAATTTCAGTTTTTGACAAATC
TGTTTTTTATGGAATTCTTATTTGTTTATGTGAAGGGATTTTGGCTTATA
AGAGGAGCTTGAATGGATATAGCGAATCTCATTGACTAACGTCTGAAGGT
AGGTTTAGTACATTTTAAACTATATTTTCAAATTTAAAGCTAGTACTTTT
ATAGAACTTTCTTTATCCTGATTTCAGTGAAAGTTCGTTACACTGTCGTC
ACTGTGACAACCTTCAAGGGACCAAAAATTTTATTGGAATTAGAAAAAAC
TTCGAATTACAGAAAGATTCGAATTAGAGAGAGTCGACTGAAGATATTAA
AATAATTTCAGTAATCTGGTAATATTTCTGGAAGTCCAAAATTTTCAAAA
GTGTACACGTATTATTTTAAATGAGAATTTTTTGAAGCCTTCCAATGTTT
TTAACTTTTGGAGTTTTAAGCTTAAAAGTGTTCTTAACATGTTCTTATTT
TCACAAATTTTAGAGCATTTTTGTCCAATTTCCCAAGAAATCGGGTGTTT
TAGAGACCGCAAAGCCACAAAATGTTCTTAACATGTTCTTAATATTTTGG
TCATCGAAGCCTTATGTTCTTATAATAGAACGTGTATTTCCCTGTCATTC
AAGATGCTTTGTTCCTTTACATTTACATTTTCCTATTTTAGTTTTTATCA
ACATGTCTGCAATACAGCTCGAAGTTTGGGATTACATCATTTTTGGTTTG
ATGTTGTTATTGTCGTCAGTGATTGGTTTATATCATGGTTACCAAAGCAA
CAAAAACAAAAGAGATTCCAAAGATGACTATTTATTGGCTGGTCAAAGCA
TAAGCTGGTTCCCACTCTTTATTTCTCTGGTTGCATCTTACTTGTCAGCT
ATAGCCTTGCTTGGAATTCCAAGTGAAATTTATACATATGGTTAGTAATA
TTCAATACACTTTTTAAAAGAACGATTTTATAAGAACAATCTTTCTCAAA
ACACCTAAAAATAGGAAATATTTACGAACAAAGCTGATCCCTGAGTTGCC
AATTTTCAGGCTATTCAAAAGAGGATGAGGGCAATTTTGGGCTGAAAATT
CAAAAAAACCTGAACAAATATTTAATGGATCTAATGAAAATAAGCGCGTG
GTGTAAATTTGATTTCTGGCTCCTCGACTTTACCCCAGTGAAATATCTGC
ATATCACGAGTTACCACCTTTTTTATTTCTAAACTTTGATATACGTAGGC
CCTGGAATCAACTGGTATGGATTTTAAAGCGTTAATCAGATGGTTGTGGA
TATTTGGCTTGTTGTATCTTTGCATTGTCCTGAACAAAACCCATAAATAG
TTTTTGTCTAAATATTTTCCACACTCGAGATATCTAAGTAAACTTTTAGT
GAAAAAAAGAGAATTTCAACGTAAGAACCGTGTGAGAACAAATTTTCAGA
AATTTCAAATTGTGCGCCTGTTAACTCGACTTTGGTAATACACCTTTTCG
ACCGTAGCCGCCAATTTCCGCGCGGGCATTTTTTCGTCCACTTTATCCCA
CTAAAACCGTCCCAGTCCTTTTTTCGTACCTATAGACAATAGAAAAATGA
GTCAAAAAAGGATTGGATCGAGTTTAGGGGGATAATCAGATAATTAAGTG
GCACGCACCTGACCGCGCGACTAGGGTCGAAAAGGTGTATTAGTTGGAAA
AAAAAAAATTCCACAAAGGGTTTGTGCAAATCATCTAACATTATCCCTTT
AACCACTAGGTGGAATGTATATTGTAATTATGATGTCTTACCCATTGTTC
ATCTTTCAATGTCTTGTCATCTATGCACCCATATTCAGACGAAGTAAAGT
CACGAGTGCCAATGAGGTAACTCAATGATGGTCTTAGGGCAGGCTTTTTC
AGATATTTCTTCCACCAATGACGTCACTTGCAACCAATCAGCTGTTGTAA
ATGTTGTTATGTCAGAAAGGATTCCTGAATTCATGATATGCACCATTGCA
ATATCTTCCGCAGACCCAACAGCTGATTGGTTGAAAGTGACGTATTGACT
GATTTTACGTCACTTACAACCAATCAGTAGACTATGCTGTAATCTAAGAC
GAGTTTCATCTAAGAGGAACAAACGTGAAGACGGGGGTTTTTCGGGGGTA
GCTGTTGTCTTAACACAGACTCTATTTTCCGCGGCGCAACATATTACGTT
TTATAATATACAAACTATGTTATATCATAATAATATATTATAGTATACGG
ACGATAGCATCATCTACCAATCAGCTGTTGTAAAACTGTTGTTATGTCAG
AAAGGGTTCACAGTTTGAAAACTATTTTACTTTGTTTTAGTACCTAGAAA
AAAGATTCCATCCGGCAGTTCGTGTTTTTGCAGCCATTTTGTTCATCAAA
GAATATGTAAGATAATTTTCTTATCAAAACCATAGATTTTATTGGTTATT
TCTTTAAGTTTAAAAAAGTTTTGAGTAATCCAACAAATGATATCTCGACA
AATTTTCAGCGGCTTTTTGATGGTATATTTCTAAAAGGTTTACAATATAC
AAACACCCCCTTATCACAGACCCATATTGGGAACCTTTCCCACTGGAAAA
ATTGGCCAAAATATCGTCCCCGGTGGAAAGTTATACACCAATTTTTGTCC
CCACTGAAAATAATCAAATAAACCAATCCTCACTGCAAAATATTATGCTA
TTTTCACATCCCAATGAATTTTCTGACTTGAAAACAAAAGTATTGAAATC
CCATATAAAATATAAATCATATAAAATATNGCTATTTTCGCATCCCAATG
AATTTTCTGACTTGAAAACAAAAGCATTGAAATCCCCGGTCATAAAAAGC
ATTGAAATCCCCGGTCATAAAAAGCATGGGAATATCAATCCCAATTGAGT
TTTGGTTCCGTTATTTTTACCCCCCTGAAAAAATCCTACCGGGTCTGTGA
GAAGGGGGTGTATACAACACTATCACGCATAAGTTTTTTTTACAGGTTTT
ATACCTAGCCGTTGTACTGTACGCTCCAAGTCTAGCGCTGCAAGCAGGTA
AAAACATGATTGAAATCGTTTTTGTTTCTATGATCTTGAAAATTAAAAGT
TCACACTTTTCTGTCTTAGAGTGTTTTAGGCCATTCTGTGACTTCCTTTT
TTGTTTTTTTTATAGCTCCTTGAACCTTCTCTTAATGATTTTTCAGAGTG
GACAATGATGCCCTGTTGGTAACACTAATATATTCAAAGGAATATACAGT
GCGCTCTTGCTAATTTGAACTTCTATTATTCAAATCTTTTTATATTTCAA
ACCAATCTTCAGTCACTGTCAAGACGAATCCGTCGTAAAATACCTTTCTA
TAATACCAATCTCTCTGTAATTCGAACAAATTAGATTCCTTCTTCTAGTT
CTAATTAGCGAGAGTCAACTGTCCCGGGGGGGGGGCTACTAGGGAAAAAA
AAGGTTACGGGGATGTGCCGCTGGTCAGGGTACCTCCATGAGTCCCAGGT
GGGGTCACAAAATACCAAAATAGAAAAATTAGTCCCATTTAGGGTTACTT
TTTTCAAAAAAAACGAGACCCACAAAGGGTCCATTTTTCGAACTTCAGCA
GCTTACCCCCGTCGGTCGACAAGGGTAGTTCCCCCCCCCCCCCGGGCAAC
TATATCGTTACTTTCTCCTTTTGTGCTTGTTTATTTTCTAGTGGCAGGTG
TTCAGATGGAGATTTCATTGGTGACAATTGCTGTTGTTTGTACCATATAC
ACAACCATTGTACGTGAAACTCAATTAAACCTTTTGATTTTGCTATATTA
TTCTGAGAGAGAAACCAAGGATTTTTGTAATTTCTCCAATATTTCTCCGT
GAGGAACTGAAGTTGACATGCATAAGACGCGAGTGCCTTAGCTCCACTAT
GTGGTATGAAAAGCTTTTGGTGGCACGTGTTTTTTTTAGGTTGAAGTTTG
AATTCAATTTCTTATACATCATATTTTTGCATCTTCCTCGTAACTTTAAT
AGAGGGTGAACAATAATGTCATTACTGTAGACAAGACCCGAACATGAGAA
ATCAGCAAAAAACAGCAAGTTGTTTTTCCAGTCTATAATAAATTCATGGT
GTGATCGAGTGATTAACAACTTTTAAGTTATCGGTATCTTTTTGCAGGGT
GGTATGAAAGGAGTGATATGGACAGACGTATTTCAGACGTTCATTATATG
CGTCGGTTTAGTTGTTGTCGTTATTATCGGGTCGTCGGAAGTCGGTGGAA
TACAAAACGTCTTTGAAATTGCTGAACGTGGAGGAAGAATGAACATTCTT
GAGTAAACGACTATTTTTGCACTTTACCAAACACATGAAATGGGCTGTTC
CAGGAAAAAAGCCTTTACTCTAATAGTTGGAAAGTTGACCCATCTGGCTT
GCTTGACGAAATTCTAGATACCCATGACAAATTTAGCCCCCTTAGATATC
TTATTTTTTAGAGGTTACCAATCAATTACCCTTGAAAAACATCCTAATTC
CTCANGGTCATAAAAAGCATGGGAATATCAATCCCAATTGAGTTTTGGTT
CCGTTATTTTTACCCCCCTGAAAAAATCCTACCGGGTCTGTGAGAAGGGG
GTGTATACAACACTATCACGCATAAGTTTTTTTTACAGGTTTTATACCTA
GCCGTTGTACTGTACGCTCCAAGTCTAGCGCTGCAAGCAGGTAAAAACAT
GATTGAAATCGTTTTTGTTTCTATGATCTTGAAAATTAAAAGTTCACACT
TTTCTGTCTTAGAGTGTTTTAGGCCATTCTGTGACTTCCTTTTTTGTTTT
TTTTATAGCTCCTTGAACCTTCTCTTAATGATTTTTCAGAGTGGACAATG
ATGCCCTGTTGGTAACACTAATATATTCAAAGGAATATACAGTGCGCTCT
TGCTAATTTGAACTTCTATTATTCAAATCTTTTTATATTTCAAACCAATC
TTCAGTCACTGTCAAGACGAATCCGTCGTAAAATACCTTTCTATAATACC
AATCTCTCTGTAATTCGAACAAATTAGATTCCTTCTTCTAGTTCTAATTA
GCGAGAGTCAACTGTCCCGGGGGGGGGGCTACTAGGGAAAAAAAAGGTTA
CGGGGATGTGCCGCTGGTCAGGGTACCTCCATGAGTCCCAGGTGGGGTCA
CAAAATACCAAAATAGAAAAATTAGTCCCATTTAGGGTTACTTTTTTCAA
AAAAAACGAGACCCACAAAGGGTCCATTTTTCGAACTTCAGCAGCTTACC
CCCGTCGGTCGACAAGGATAGTACCCCCCCCCCCCGGNAAACAGCAAGTT
GTTTTTCCAGTCTATAATGAATTCATGGTGTGATCGAGTGATTAACAACT
TTTAAGTTATCGGTATCTTTTTGCAGGGTGGTATGAAAGGAGTGATATGG
ACAGACGTATTTCAGACGTTCATTATATGCGTCGGTTTGGTCGTTGTCGT
TATTATCGGGTCGTCGGAAGTCGGTGGAATACAAAACGTCTTTGAAATCG
CTGAACGTGGAGGAAGAATGAACATTCTTGAGTAAACGACTATTTTTACA
CTTTACCAAACACATGAAATGGGCTGTTCCAGGAAAAAAGTCTTTACTCT
AATTATAGTTGGAAAGCTTGCTTGACGAAATTCTAGATACCCATGACAAA
TTTAGCCCCCTTAGATATCTTAATTTTTAGAGGTTACCAATCAATTACCC
TTGAAAAACATCCTAATTCCTCAGTTTGGGGCGGGATTCTGGAATACGGT
ATATAGGTACCGGATTTCGGTGGTCTGTAAGTCTCTTAAAAGTGGAATTA
ACGCAGCTAGAAAATAAAGATATATATTATCCCCTTTGTTTCTCTTCAAA
AGACAATTTAATACTACAACCATCTACCTGTCTTTTCACAGCTTCAACCC
TGATCCACGTGTCCGGAACACATTTTGGTCTTTTGTCTTTGGTGGGATGT
TTAGCGCCATGCCTGTATACTGTGTTGGTCAAATGATGGTACAACGGATC
ATGTCCGCCAAATCTGAAAAAACTGTTCGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016094XLOC_016094Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028410-exon-sc0000676-1575043694:173788..174187TCONS_00028410-exon-sc0000676-1575043694:173788..174187Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1575043694:172684..172917TCONS_00028410-exon-sc0000676-1575043694:172684..172917Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1575043694:169616..169747TCONS_00028410-exon-sc0000676-1575043694:169616..169747Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1575043694:167548..167796TCONS_00028410-exon-sc0000676-1575043694:167548..167796Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1575043694:166622..166728TCONS_00028410-exon-sc0000676-1575043694:166622..166728Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1575043694:166082..166147TCONS_00028410-exon-sc0000676-1575043694:166082..166147Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1575043694:165441..165492TCONS_00028410-exon-sc0000676-1575043694:165441..165492Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1575043694:164729..164796TCONS_00028410-exon-sc0000676-1575043694:164729..164796Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1575043694:164186..164340TCONS_00028410-exon-sc0000676-1575043694:164186..164340Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1575043694:162456..162596TCONS_00028410-exon-sc0000676-1575043694:162456..162596Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1510915933:173788..174187TCONS_00028410-exon-sc0000676-1510915933:173788..174187Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1510915933:172684..172917TCONS_00028410-exon-sc0000676-1510915933:172684..172917Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1510915933:169616..169747TCONS_00028410-exon-sc0000676-1510915933:169616..169747Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1510915933:167548..167796TCONS_00028410-exon-sc0000676-1510915933:167548..167796Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1510915933:166622..166728TCONS_00028410-exon-sc0000676-1510915933:166622..166728Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1510915933:166082..166147TCONS_00028410-exon-sc0000676-1510915933:166082..166147Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1510915933:165441..165492TCONS_00028410-exon-sc0000676-1510915933:165441..165492Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1510915933:164729..164796TCONS_00028410-exon-sc0000676-1510915933:164729..164796Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1510915933:164186..164340TCONS_00028410-exon-sc0000676-1510915933:164186..164340Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1510915933:162456..162596TCONS_00028410-exon-sc0000676-1510915933:162456..162596Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1491911889:173788..174187TCONS_00028410-exon-sc0000676-1491911889:173788..174187Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1491911889:172684..172917TCONS_00028410-exon-sc0000676-1491911889:172684..172917Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1491911889:169616..169747TCONS_00028410-exon-sc0000676-1491911889:169616..169747Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1491911889:167548..167796TCONS_00028410-exon-sc0000676-1491911889:167548..167796Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1491911889:166622..166728TCONS_00028410-exon-sc0000676-1491911889:166622..166728Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1491911889:166082..166147TCONS_00028410-exon-sc0000676-1491911889:166082..166147Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1491911889:165441..165492TCONS_00028410-exon-sc0000676-1491911889:165441..165492Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1491911889:164729..164796TCONS_00028410-exon-sc0000676-1491911889:164729..164796Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1491911889:164186..164340TCONS_00028410-exon-sc0000676-1491911889:164186..164340Clytia hemisphaericaexon
TCONS_00028410-exon-sc0000676-1491911889:162456..162596TCONS_00028410-exon-sc0000676-1491911889:162456..162596Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000676supercontigsc0000676:162456..174187 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.00063	1.01127	0.746901	1.60793	1.2485	1.29258	1.52069	1.97578	1.60392	2.39721	1.49083	2.00712	0.107477	0	0	0	2.04749	1.56222	0	0	3.38483	4.14973	0.83723	0.765972	1.86552	0.728272	0.247215	0.16468	0	0
Blast
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BLAST of TCONS_00028410 vs. Swiss-Prot (Human)
Match: SC5AC (Sodium-coupled monocarboxylate transporter 2 OS=Homo sapiens GN=SLC5A12 PE=2 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 1.869e-57
Identity = 107/275 (38.91%), Postives = 172/275 (62.55%), Query Frame = 1 
Query:  778 MSAIQLEVWDYIIFGLMLLLSSVIGLYHGYQSNKNKRDSKDDYLLAGQSISWFPLFISLVASYLSAIALLGIPSEIYTYGGMYIVIMMSYPLFIFQCLVIYAPIFRRSKVTSANEYLEKRFHPAVRVFAAILFIKEYVLYLAVVLYAPSLALQAVAGVQMEISLVTIAVVCTIYTTIGGMKGVIWTDVFQTFXXXXXXXXXXXXXXXXXXXXQNVFEIAERGGRMNILDFNPDPRVRNTFWSFVFGGMFSAMPVYCVGQMMVQRIMSAKSEKTVR 1602
            M      VWDY++F  +  +SS IG++  +   + K+ +  ++L+ G+ +S+ P+ +SL AS++SA+ +LG PSE+Y +G  ++V  ++Y   I     ++ P+F RS +TS  EYL+ RF+  VR  A +++I + +LY  VV+YAP+LAL  V G  +  S+    +VCT Y T+GG+K V+WTD FQ  ++ VG + V+I GS+  GG  NV E +  G R++I DF+ DP  R+TFW+   GG F+ + +Y V Q  +QR +S K+EK  +
Sbjct:    1 MEVKNFAVWDYVVFAALFFISSGIGVF--FAIKERKKATSREFLVGGRQMSFGPVGLSLTASFMSAVTVLGTPSEVYRFGASFLVFFIAYLFVILLTSELFLPVFYRSGITSTYEYLQLRFNKPVRYAATVIYIVQTILYTGVVVYAPALALNQVTGFDLWGSVFATGIVCTFYCTLGGLKAVVWTDAFQMVVMIVGFLTVLIQGSTHAGGFHNVLEQSTNGSRLHIFDFDVDPLRRHTFWTITVGGTFTWLGIYGVNQSTIQRCISCKTEKHAK 273
The following BLAST results are available for this feature:
BLAST of TCONS_00028410 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SC5AC1.869e-5738.91Sodium-coupled monocarboxylate transporter 2 OS=Ho... [more]
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