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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028437 ID=TCONS_00028437|Name=TCONS_00028437|organism=Clytia hemisphaerica|type=transcript|length=3542bp
CTCAcctaaatttgaatttgaagagtATGAAGTTAAATGAATCGTTGCAG
CATATTTGTTTGACACAATATTAACCTTTTAACCTTGCAATCACCTCACC
TGGAGTTCCTTGATGTTGCACGAAGTTTGAACTGCCCCAACAACGTGTCT
TTGCTAAAATGGCGCGCTATTGCTCCACAACGTTGTCTATCACAAATgat
agaaaaaatatatatcaacGGGCGGGGTAAGTTAGCTTTGGctttgaaaa
tatcatttttgcTCTGAGGAACAATCAATCCCCCTCATCAATATTCTGTA
TTTCAATTAAAAGGAAAACATAAAGCTTTTACAAATTACATGGGTAATGT
AAATAACAACATCTTGCAGTGTTCCGCCTTTCTTTTCGGGCGTTAACAGG
CgttttttagataaaaatccTTCTTttccgaaagtgaaagtagtcgAAAC
AAATATGGCGGAAAATCTTGACCAATCTTCACCACAAAATCACGTAAACG
TATGAAAATCTTTGGTATTATTCTGGTTTCTTATGTTTAACAATGTAATT
GAGATTCAAAATCGATATAAAGAAGAAAGCAGTTATGTCACAagatgaaa
tcgaaaaaaagatTGCTGTAAGAACCTTCAAAGTGATAATAATTGGAGAT
TCCAACGTGGGTAAAACGTGCTTAACTCTGCGTGCAGCTGCTGGAACTTT
TCCCTCAAGAACAGAAGCAACGATAGGTGtcgatttcaaagaaaaactca
tCAAATTTGGTGAAGAAAAAGTAAAGTTGCAATTATGGGATTCCGCGGGA
CAAGAACGATTTCGACACAGCATGGTACCACACTATTACCGGAACGTCCA
CGCCGTTATTTTCGTTTATGACGTCACACGTAAAGCATCTTTTGAGAACA
TTGAAAAATGGATTGAAGAGTTTCGTTGCAACGTCATTACGAATTCACAA
AAAGTACCTCAGTTAATCATCGGAAACAAGTGTGATTTACATGCTGATAG
ACAGGTCAGCGAGACAGACGTCAAAGCTTTGGCTAGTCTCCATGGGTTAC
CATTTTGGGAGACATCAGCTAAGAGTGAATTAGAAATGGATACCGTTGAA
ACTATATTCCAATCACTTGGGGAGACTTTATTTTATAATACACCTTTGAA
AGATTTTCCGCCACATTTTTCAACTACCATTCAACAGCAACATCACGCCG
GTCTCCGTGTAAACCAGTCCTTATCTCAATCTTCTGATGACATCACCAAA
AAGAATTCTGtgaaattgaaaaggaaaagtCGGAAAAGTCGGAAAAAGAA
ATCACCGAATTTGGAAGAAGAGTCGGGTGAGAAAAGTGGATGCTGTAAAA
CAGGCTAATTACCTtatgggaactaattttcgcggtttacATCCCCTATT
TGCcgaaattgtttgaaatttctaggggtttttgagaatttttattaaga
atttttagtaaaaattgcattttgctaaactaattttcgcagtagaaacc
caaaaacgcaaaaattagtgccggcgaaaattagtttccgcaaAAATTAG
CTCCCTTAAGGTCACCTTATGTTTCTTCTTTCGCATCGATTGCAGTATAA
CTGAAGGATGAGTTATTAAAGCCAATGTAGTTAGCTGACAAGGATTCTTA
TGGGGTTATGATCAAGCTATTGTTTAATTCTTTCAACTAAACATTTTAAA
TAAACTCCGAAAACATAAAAGGCTGAAAGAGTTATTAAAGAAGATATAGA
GCATAAAGAAGATGACTACGTATTGTCACCAGCCTTTCCACGAGAAATGA
ATGACTCAGAGAAAAGTTTCTTGAGCGAGAAATCAATCTAATATGAGATC
ACTTATTTTTCTCTTCGTTTGGTTAATACAAGATTGGACTTTTTACActg
caaatatttaaaaacttcCTCTAAAATCAGTTTGAATTGGCTACGCACTA
TCTTCAGTGATAGAGTTTGCTTTATATTACAATACTGCAGTGCAACGAct
tcgttttgaaaccattacctaaaggtgattaaatcccttTAAAATGTTGC
TTGAATAAATAGAATTGACTTCTTAGGAACTTTTTCTAGGAATCATATTA
TTTCCAtggcaatattttgaaatggagcgttgctcgtgacgtaatttatg
aaaaggtctaccTTCATCAATTCtcaaacacccccttctcacagacccgg
taggatatTTTCAGCCAGTTGGGGGTAAAAGTAATAGACTGAAAACTGAT
GGGGactgatatttccatattttctaTGACTGGAGAattatatttcattg
ttttcaactcTAAAAATTTATTGGGGACGGGGAAAATATCATTACATTTt
ccagtgaggattggtttatttgagatttttcagtggggacataaattgga
gtataattatccaccggggacgatattttggcaaatttatccagtgggaa
ggggtcccagtgggtctgtgagaaggggacgTTCTTGATAATGATTAACC
CCAGGCCGTATTTGGAAAAGCCGGTAAACTATTTAATCTAAAGAATATAA
ttatttcactttttattttggaTTGTAGTCACACCACGTCAGACCATATT
AAAATAAGTCTGGACTACAATTTATCCTAATTGAACCTAATAAAATATTT
ACACTATGGATAAAACTATGAAACCGACATATTTATCCTGATAAACTGAA
ACCCAGTGCCTTGTAAGCACCCCTTAAtacacttcttttttttattaaaa
cacctaaattttggctgagcctggatgtgcttattctTTCAGCAATTTTC
AANAACACCTAaattttggctgagcctggatgtgcttattcttttagcaa
ttttcagcctaaaatgttcttaaatgcgttcttaattttttcagactact
ctaaatcgacaaatcatgcaaaataaagagcacttaaaattggtaaaatt
tggacaatatttgactctcgattttaagaaaatccatccctaaatttggt
taaaactgcttgaaaaggggaaaaaattgcagtttcttgtcatttttttc
caaactgaggctgggcatgttcttacgatgttcttaatttttcgacaaat
tttgcttcaatgttcttataaactgggttctaataaaaaaaacgtttatc
cAGGGTGATATTTTAGCCGTAAAGAAGTAATACatctgaaaattattttt
gttaacAAATAGAGGTTTTTAAAACAAGTATAGTAGATAAACGcttatct
ttttaaaatttcagttatttttttaaagattttgttaacattttcatatt
atttctaaaaaatattttttaaatcaattttctaaCTTATTATAAtataa
tgataattttttttctgttctgtaaatttttgaattgcaattttctataa
aagatatattttaaaaagctttatgaAATAAAAAGGGTCAACGcatattg
aaaaatttcttaattAGGATTAATTTTATTGCACAATCTAAGTTCAGTTT
GAATAAGATTTTAAATGCAAAATAAAActattcaactttttt Run BLAST on NCBI protein sequence of TCONS_00028437-protein >TCONS_00028437-protein ID=TCONS_00028437-protein|Name=TCONS_00028437-protein|organism=Clytia hemisphaerica|type=polypeptide|length=257bp
MSQDEIEKKIAVRTFKVIIIGDSNVGKTCLTLRAAAGTFPSRTEATIGVD
FKEKLIKFGEEKVKLQLWDSAGQERFRHSMVPHYYRNVHAVIFVYDVTRK
ASFENIEKWIEEFRCNVITNSQKVPQLIIGNKCDLHADRQVSETDVKALA
SLHGLPFWETSAKSELEMDTVETIFQSLGETLFYNTPLKDFPPHFSTTIQ
QQHHAGLRVNQSLSQSSDDITKKNSVKLKRKSRKSRKKKSPNLEEESGEK
SGCCKTG Run BLAST on NCBI transcript from alignment at sc0000678:69330..79253- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028437 ID=TCONS_00028437|Name=TCONS_00028437|organism=Clytia hemisphaerica|type=transcript|length=9924bp|location=Sequence derived from alignment at sc0000678:69330..79253- (Clytia hemisphaerica)
CTCACCTAAATTTGAATTTGAAGAGTATGAAGTTAAATGAATCGTTGCAG
CATATTTGTTTGACACAATATTAACCTTTTAACCTTGCAATCACCTCACC
TGGAGTTCCTTGATGTTGCACGAAGTTTGAACTGCCCCAACAACGTGTCT
TTGCTAAAATGGCGCGCTATTGCTCCACAACGTTGTCTATCACAAATGAT
AGAAAAAATATATATCAACGGGCGGGGTAAGTTAGCTTTGGCTTTGAAAA
TATCATTTTTGCTCTGAGGAACAATCAATCCCCCTCATCAATATTCTGTA
TTTCAATTAAAAGGAAAACATAAAGCTTTTACAAATTACATGGGTAATGT
AAATAACAACATCTTGCAGTGTTCCGCCTTTCTTTTCGGGCGTTAACAGG
CGTTTTTTAGATAAAAATCCTTCTTTTCCGAAAGTGAAAGTAGTCGAAAC
AAATATGGCGGAAAATCTTGACCAATCTTCACCACAAAATCACGTAAACG
TATGAAAATCTTTGGTATTATTCTGGTTTCTTATGTTTAACAATGTAATT
GAGATTCAAAATCGATATAAAGAAGAAAGCAGTTATGTCACAAGATGAAA
TCGAAAAAAAGATTGCTGTAAGAACCTTCAAAGTGATAATAATTGGTGAG
TGAGGATAGTTTTTGTCTCTTTTTTATTATTTATTTATTGTCAGATTGTC
AGATTGTAGTGGTGTACCTTTGTAACGTCTTTGTACTTTTTTTTAAGAGA
AGGGGAATCTCGCATCAGCCAACACCACAATATCCTTTGACATCCATTAG
CAATTAGTAGTACAGAAATAAAAACTGGGATACATGGCTCAGCATCTTTA
TCCAGACCCGATCAATCGAACTTGTCGAACCAATCGAACAATCGAACTAA
TCAAACTCCATATCGAACGATTAAAGTTCGATTAAAAAAATTAATCAAAC
TGTAAGATTTTTTAAAATATTGTGAGTGTTCGAATTACTTTAATTAGGGA
GGTCGGGCCTTATGCGTGCGGCAGTAACAAAACATAGATTTTCGAAAAGA
GCCTAAGAGAAAGAGAAAAATTTCAAACCTTTACCGTAAGTTGGTCTAAT
GTCAACATTCCTCTTCTAATTTCGACTCCCTTCTTTAAAGATAGAAATTA
TTAGAAGGTCGGGATCACTGATAGATAAAAGATTTTTTCAATCTGACAGC
TAAGCAAGGGAAAATAAAATAGTTTTCATCAGCAATCCCGACCTTCCTAT
TATTCCTATCTGTAAAGAAGGATGTCGAAATTAGAAAAAGGGTGTCGACA
TTAGACCAACTTACGGTATTATTTGAATGCTTGCCTTTTTAATATACTCG
TATATAAAAAAATTAAAATTTTTTAACTTGTTATTAGTCAAAAAAGTCAT
TAAAATTGATTAGCCTTCTGCGATGGAGTGCAAGGCTGAAAGCCACATGA
ATATGCTTCATCCTATAAANTCAAATAATAAAGGTTTAAAATTTGTGATG
GAGTGTACACATGAATATGGTTCATCCTATAAAAGGAAGTTCATTCTTTG
GTGGCCTATCTTGAAGTGAAGGTGGTTGAACAAAATGTTTTTGGCATATT
GATGGAACTGTCAAAGCCAAATTTTGAATGTAAATCGGGAAATTACTTCC
GATAATGGATTATACACTTTTCCTGTATCCTTTTAGCTCCAGAGGCGGTT
TGTTGGGGCGTAGTATTCCGCCACTCAGCAGCGTGCGAAATCGCAACAAA
GGGGCTACAGACTTTATTCCGGATAGACAAATATCCAGGTACAATAAACG
TCAAGCTGTTAAGTCCGGGGAACTGTCGAAATGTCATTCGCGTGCCAGGA
CAAAGCTTTTGCAAGCGAGGGAAGATATGAGGATTTAATATCATTGAACT
AATCGAACTTTTTACTGACCGAACTAATCAAACTGCTATTGCTTCAAAAA
TTGTGAGTGTTCAATTAGGTTCCATTAATTTTTTTAATCGAATTTTAAAT
GCTCGATGGAGTTTGACTAAAGTCTGTCCAGATATAATTGGCAGTGGAAA
CAAGAATGCCTGTTACTTTTGATAATCAAATATAATTATGAAAATTTTTT
TTGCTTGTTTTAGAGAATCAAAAGCGCTATATTTGAATGTATTTTTGGTT
GAAAAATTCGCGATTTTTAGCGGTTTAATTTGCGATTGTAAAAATTGAGC
TTTTTTTCTACTTATGCTATAACTTTCATTTTTACACCAGTGGTAGATCA
ACCTTAGGTCAAGAAGTTTGTTAAATTTCAAGGTAAACAAAAGAGTCCTT
TGGAAGATATGGGACCCGAAATACCCCTTGGTAGCACTTTTCTGTGAAAT
ATCACATCTCCAACTTATTACTCAAAACGGGGGTAGTGATATGATTGATG
AAACAGTTTTTCGATCATAACACATTTTACAATCTCTTTAATGACCTCAT
AGCCAAACTGTGTTTAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATACCAA
CGCACCAACACTTAACACTTTCCAACTTTTAATTGCACTGTTCAAAAAAG
ATAACATAACCCCCGTTTTTAGTAATAAGTTGAAGATTTGATATTTCACA
GAAAAAGGGGTGTTTCGGGTCCCATATCTTCCGAAGGACTTTTCTGTTCG
CCTTGAAATTTAAGAAACTTCTTAACCTAAGGTTGAACTACCACTGGTGT
AAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTAGAAAAAAAGCTCAATTTTTACAATCGCAAATT
AAACCGCTAAAAATCGCGAATTTTTCAACCAAAAATACATTCAAATATAG
CGCTTTTAATTCTCTAAAACAAGCAAAAAAAATTTTCATAATTATATTTG
ACTATCAAAAGTTACAGGCATTCTTGTCTCCACTGCCAATTATATCAGGA
CAGACTTTAGTTCGATTGTTCGATTGGTTCGACAAGTTCGATTGATTGGG
TCTGGTCTAATGGGCACCCAAACAACTTTCTCGCGGGTCACTCACTCTGG
GCCAATAGACCTTTTCACCTTTCGATCCGCCATCTTGAATTGTATGCAAA
AATATAGGAACGAAAAAGCCGTGGCTGGATTTAGTTGGAAAATATGCAAA
ACATATGCAAATTTAAACAAAGATTAAAAAGACAACAATGCATCTTTTTA
TAAAGAAATATTAAATTATGACGTCACAATGTTTGATTTGATCATTTGGC
TGTTCTATTCCTAGGAGAATAATTTACCGTCAGCCAAATATTATTTTTTT
ACGTTCGCGGGTGATTTTTCAGCTTGAGTTTATGTTTAATGTTTTTGAAG
TGCTTGTTCTAAGAGATGAGCGAATATAATTATTTTTAGTTTTCAAGAGA
AGCAAATTTTAATCTTTCTTCTACAAGATTACACTTTAACATAATGCCAA
TTATGCATATGTACGTTTTATATTAATATACTTTCTTTTTGCATATGTTT
TGCATACTTTCTAAGGGAATTTCACCACGGCAATTCGGCCACCATAATTT
TTGCATACAATTCAATATGGCGGATGGAGGGGCAAAAAGGTCTATTGGTG
ATTTTAAACTTGAAAAAGTCCCAAACATGACCCATGCCCTACTGGGCCTG
GCATGTTAGGGTCAGGTTTTTGAAAGTGAAAATGATTGAAGTATATAATG
AATTGAACTACCGTAACTTGGTCTAATGTTGACATCCCTCCTCTAATTCC
GACACCCTTTTTATCAGCTGAAATTGATAGAAAGGTTGAAACTGTTTTTC
CTTGCTTAGTGGTCAGAAAGGAATAATCCTTTTTCAATCAGTGATTCAAG
CTTTCATATTATTCCTGTCTCTAAAGAAGGGTGTCGGAATTAGACAAGGG
ATGTCGATATTAGACCCACTTTACGGTAATTGAGAAAAAGATTGAAAATT
TCAATTAGCTAGTTTCAGATAAGTATATATTCGCTGATTTTCAACATTGC
GATCTGTATATGAAACTTTTGATGGAATTTTAAAAATGTGCTATATTTCT
ACCGGGGAAGATCTTTTTCAAATAAATCTCATAAATAAGTCAAGCTTTTT
TCTAATGTATTGCATGAAATTTGATACCATCCTTAGTATTGTCTCTTTTA
AAAGCTCTTTTATTTGTTACTCGTGGGTCAAATCGAAAAAGTAATACTGT
ACCTAAAACTTTGAGTTAGGATATCTACTTTCTAAATATTATAACATTTC
GAACTAATAATATAATCATATCTAAAAGTATCCACAGTTTTTCTTAGGTC
ACCGGTATATAAAATAGATGCAAGGTGTAGATATTTTGTACAAAATTTGT
CCATTTTCTACTTGAATTTTGAATTGATCTTTTTGTCTCGTGCACATTCA
ATTTAGTGCAGCAGTGTAGCAAGTTCCTCCTTTTCACATAGATTCTCCCG
GGGGAAGGTCAATCAGGTCGGCGGCTACTAATCAGCATGCATACAACGTG
CGAATTGAGAGTATGAAGCTGAAAGATAGTATCTTGAAAATTACCTCCCA
AATTTTAATTTAAAAATAAGTCTGACGTCTAACTATGTCAAGGTTATTTA
TTTAGAAATACAAGCATTTCAATGAGAAATTCTAATAAGAAGCATTAGAA
GTTCTTATTGCCCATCTTATTACAAGGGTTTGAGCCTGGATGGGTATCGT
TATAAAAAAGTAACGTTTCCGTGTTTTTTTTGGTGTTTTAAAGTTCTTTT
TAAGTGAAATCCAAACCGAGATTATCTTCTAATGGATGCTGAATCTTTGC
AGTGATTTCTTTAATATTCCAATGATCAAGTTCATCAAGGTCATCTTTAT
TATATTAATCCTTGTAATACCATGTACACTTTCTTTTGCAGGAGATTCCA
ACGTGGGTAAAACGTGCTTAACTCTGCGGGCAGCTGCTGGAACTTTCCCC
TCAAGAACAGAAGCAACGATAGGTGTCGATTTCAAAGAAAAACTCATCAA
GTTCGGTGAAGAAAAAGTAAAGGTATTTAAAGAAAAGCTACAGCTGTTTA
TTTTCAAAAACCAATCTCAAAACTTTGTTATCTGTTCATTTTATTGTTGC
CCAGTAATTCAAATGTTTTTTTACATCTGGTGCAACTGTGTAAAATAAAA
CTGAAAGTGTCAACTTTAGATTTAAAAAAGATTTACTGCCTCAGCAGCTA
GTTATATTGAGAAAAAATGATCTAGCGGAAAAATTTTGCAGGGGGGATTA
CGAAACTTTAAGGGTTTGACGAAGTTTTCCCTGTTGACAATTCCCCTAAT
ATTTCATCATTCAACAAAGTATTTCCCAAAAATATTTATTCCCAACCAAC
CAGGTCTAATCCCTGAGCAAAATCTATCCTAACATTTATTGTCCTTGTTA
GGCTCTTTTTATCAAAATACCTGCTTATACCAAAAAATTAAGGTTCCATA
GCTCTAGATAGAAACACTCTTTTCAAAATCAGTCCTCGAAAATTGATAAC
ATTTGAAATTTTGCTCCCGGAAAAGTGACCGAAATATTTTGAGATGACAT
AATGTTTCCCCGTTGAAGTTTCCCCACGTCATTTTCCCCTACAAGGTATA
TGAGCTTTGGAATATTGACATCTCATATAATCATATAAGATCTTTAATTT
ATTTTTATTTAATATATTTAATAATTTTGATTTATAAATTCAGTTGCAAT
TATGGGATTNCTTGAAAATTACCTCCCAAATTTTAATTTAAAAATAAGTC
TGACGTCTAACTATGTCAAGGTTATTCATTTAGAAATACAAGCATTTCAA
TGAGAAATTCTAATAAGAAGCATTAGAAGTTCTTATTGCCCATCTTATTA
CAAGGGTTTGAGCCTGGATGGGTATCGTTATAAAAAAGTAACGTTTCCGT
GTTTTTTTTGGTGTTTTAAAGTTCTTTTTAAGTGAAATCCAAACCGAGAT
TATCTTCTAATGGATGCTGAATCTTTGCAGTGATTTCTTTAATATTCCAA
TGATCAAGTTCATCAAGGTCATCTTTATTATATTAATCCTTGTAATACCA
TGTACACTTTCTTTTGCAGGAGATTCCAACGTGGGTAAAACGTGCTTAAC
TCTGCGTGCAGCTGCTGGAACTTTTCCCTCAAGAACAGAAGCAACGATAG
GTGTCGATTTCAAAGAAAAACTCATCAAATTTGGTGAAGAAAAAGTAAAG
GTATTTAAAGTAAAGCTACAATTGTTTTTTCACATCTGGTTCAACTGTGT
AAAATAAAACTGAAAGTGTCAACTTTAGCTTAAAAAAAGATTTACTGTAG
ATTCATAACCTCAGTAGCCAGTCAGTTTATATTGAGAAAAATTGACCCAG
TGGAAAAATTTTGCAGCGGGGGGGGGTTACGAAACTTTAATGGTTTGACG
AAGTTTTCCCTGTTGACAATTCCCCTAATATTTCATCATCCAACAAAGTA
TATCCCCCAAAATGTTTATTCCCAACCAAAACTTTGGTTTAGCCTAAACT
TTAGTCTAGACCAGCTCTTGTTCCTGAGCAAAATTTATCCTAACATTTTA
TTGTCCTTGTTAGGCTAGCTTTTTATCAAAATACCTGCTTATACCACACA
ATTAGGGTTCCCTCTCTAGAGAGAAATATTTCCTTTCAAAATCAGTCGTC
GAAAAGTGATAAAATTTGAAATTCTCGCCCGAAAAAGTGACGGAAATATT
TCGAGATGACATATTGTTTTCCCGTTGAAGTTTCTCCACGTCATTTTTTA
ATCATATCATGTCTTTAATTTATTTAATATATTTAATAATTTTGATTTAT
AAATTCAGTTGCAATTATGGGATTCCGCGGGACAAGAACGATTTCGACAC
AGCATGGTACCACACTATTACCGGAACGTCCACGCCGTTATTTTCGTTTA
TGACGTCACACGTAAAGCATCTTTTGAGAACATTGAAAAATGGATTGAAG
AGTTTCGTTGCAACGTCATTACGAATTCACAAAAAGTACCTCAGTTAATC
ATCGGAAACAAGTGTGATTTACATGCTGATAGACAGGTCAGCGAGACAGA
CGTCAAAGCTTTGGCTAGTCTCCATGGGTTACCATTTTGGGAGACATCAG
CTAAGAGTGAATTAGAAATGGATACCGTTGAAACTATATTCCAATCACTT
GGGGAGACTTTATTTTATAATACACCTTTGAAAGATTTTCCGCCACATTT
TTCAACTACCATTCAACAGCAACATCACGCCGGTCTCCGTGTAAACCAGT
CCTTATCTCAATCTTCTGATGACATCACCAAAAAGAATTCTGTGAAATTG
AAAAGGAAAAGTCGGAAAAGTCGGAAAAAGAAATCACCGAATTTGGAAGA
AGAGTCGGGTGAGAAAAGTGGATGCTGTAAAACAGGCTAATTACCTTATG
GGAACTAATTTTCGCGGTTTACATCCCCTATTTGCCGAAATTGTTTGAAA
TTTCTAGGGGTTTTTGAGAATTTTTATTAAGAATTTTTAGTAAAAATTGC
ATTTTGCTAAACTAATTTTCGCAGTAGAAACCCAAAAACGCAAAAATTAG
TGCCGGCGAAAATTAGTTTCCGCAAAAATTAGCTCCCTTAAGGTCACCTT
ATGTTTCTTCTTTCGCATCGATTGCAGTATAACTGAAGGATGAGTTATTA
AAGCCAATGTAGTTAGCTGACAAGGATTCTTATGGGGTTATGATCAAGCT
ATTGTTTAATTCTTTCAACTAAACATTTTAAATAAACTCCGAAAACATAA
AAGGCTGAAAGAGTTATTAAAGAAGATATAGAGCATAAAGAAGATGACTA
CGTATTGTCACCAGCCTTTCCACGAGAAATGAATGACTCAGAGAAAAGTT
TCTTGAGCGAGAAATCAATCTAATATGAGATCACTTATTTTTCTCTTCGT
TTGGTTAATACAAGATTGGACTTTTTACACTGCAAATATTTAAAAACTTC
CTCTAAAATCAGTTTGAATTGGCTACGCACTATCTTCAGTGATAGAGTTT
GCTTTATATTACAATACTGCAGTGCAACGACTTCGTTTTGAAACCATTAC
CTAAAGGTGATTAAATCCCTTTAAAATGTTGCTTGAATAAATAGAATTGA
CTTCTTAGGAACTTTTTCTAGGAATCATATTATTTCCATGGCAATATTTT
GAAATGGAGCGTTGCTCGTGACGTAATTTATGAAAAGGTCTACCTTCATC
AATTCTCAAACACCCCCTTCTCACAGACCCGGTAGGATATTTTCAGCCAG
TTGGGGGTAAAAGTAATAGACTGAAAACTGATGGGGACTGATATTTCCAT
ATTTTCTATGACTGGAGAATTATATTTCATTGTTTTCAACTCTAAAAATT
TATTGGGGACGGGGAAAATATCATTACATTTTCCAGTGAGGATTGGTTTA
TTTGAGATTTTTCAGTGGGGACATAAATTGGAGTATAATTATCCACCGGG
GACGATATTTTGGCAAATTTATCCAGTGGGAAGGGGTCCCAGTGGGTCTG
TGAGAAGGGGACGTTCTTGATAATGATTAACCCCAGGCCGTATTTGGAAA
AGCCGGTAAACTATTTAATCTAAAGAATATAATTATTTCACTTTTTATTT
TGGATTGTAGTCACACCACGTCAGACCATATTAAAATAAGTCTGGACTAC
AATTTATCCTAATTGAACCTAATAAAATATTTACACTATGGATAAAACTA
TGAAACCGACATATTTATCCTGATAAACTGAAACCCAGTGCCTTGTAAGC
ACCCCTTAATACACTTCTTTTTTTTATTAAAACACCTAAATTTTGGCTGA
GCCTGGATGTGCTTATTCTTTCAGCAATTTTCAANAACACCTAAATTTTG
GCTGAGCCTGGATGTGCTTATTCTTTTAGCAATTTTCAGCCTAAAATGTT
CTTAAATGCGTTCTTAATTTTTTCAGACTACTCTAAATCGACAAATCATG
CAAAATAAAGAGCACTTAAAATTGGTAAAATTTGGACAATATTTGACTCT
CGATTTTAAGAAAATCCATCCCTAAATTTGGTTAAAACTGCTTGAAAAGG
GGAAAAAATTGCAGTTTCTTGTCATTTTTTTCCAAACTGAGGCTGGGCAT
GTTCTTACGATGTTCTTAATTTTTCGACAAATTTTGCTTCAATGTTCTTA
TAAACTGGGTTCTAATAAAAAAAACGTTTATCCAGGGTGATATTTTAGCC
GTAAAGAAGTAATACATCTGAAAATTATTTTTGTTAACAAATAGAGGTTT
TTAAAACAAGTATAGTAGATAAACGCTTATCTTTTTAAAATTTCAGTTAT
TTTTTTAAAGATTTTGTTAACATTTTCATATTATTTCTAAAAAATATTTT
TTAAATCAATTTTCTAACTTATTATAATATAATGATAATTTTTTTTCTGT
TCTGTAAATTTTTGAATTGCAATTTTCTATAAAAGATATATTTTAAAAAG
CTTTATGAAATAAAAAGGGTCAACGCATATTGAAAAATTTCTTAATTAGG
ATTAATTTTATTGCACAATCTAAGTTCAGTTTGAATAAGATTTTAAATGC
AAAATAAAACTATTCAACTTTTTT Coding sequence (CDS) from alignment at sc0000678:69330..79253- >TCONS_00028437 ID=TCONS_00028437|Name=TCONS_00028437|organism=Clytia hemisphaerica|type=CDS|length=2322bp|location=Sequence derived from alignment at sc0000678:69330..79253- (Clytia hemisphaerica)
TTGCAATTATGGGATTCCGCGGGACAAGAACGATTTCGACACAGCATGGT
ACCACACTATTACCGGAACGTCCACGCCGTTATTTTCGTTTATGACGTCA
CACGTAAAGCATCTTTTGAGAACATTGAAAAATGGATTGAAGAGTTTCGT
TGCAACGTCATTACGAATTCACAAAAAGTACCTCAGTTAATCATCGGAAA
CAAGTGTGATTTACATGCTGATAGACAGGTCAGCGAGACAGACGTCAAAG
CTTTGGCTAGTCTCCATGGGTTACCATTTTGGGAGACATCAGCTAAGAGT
GAATTAGAAATGGATACCGTTGAAACTATATTCCAATCACTTGGGGAGAC
TTTATTTTATAATACACCTTTGAAAGATTTTCCGCCACATTTTTCAACTA
CCATTCAACAGCAACATCACGCCGGTCTCCGTGTAAACCAGTCCTTATCT
CAATCTTCTGATGACATCACCAAAAAGAATTCTGTGAAATTGAAAAGGAA
AAGTCGGAAAAGTCGGAAAAAGAAATCACCGAATTTGGAAGAAGAGTCGG
GTGAGAAAAGTGGATGCTGTAAAACAGGCTAAGAGATTCCAACGTGGGTA
AAACGTGCTTAACTCTGCGTGCAGCTGCTGGAACTTTTCCCTCAAGAACA
GAAGCAACGATAGGTGTCGATTTCAAAGAAAAACTCATCAAATTTGGTGA
AGAAAAAGTAAAGATGTCACAAGATGAAATCGAAAAAAAGATTGCTGTAA
GAACCTTCAAAGTGATAATAATTGTTGCAATTATGGGATTCCGCGGGACA
AGAACGATTTCGACACAGCATGGTACCACACTATTACCGGAACGTCCACG
CCGTTATTTTCGTTTATGACGTCACACGTAAAGCATCTTTTGAGAACATT
GAAAAATGGATTGAAGAGTTTCGTTGCAACGTCATTACGAATTCACAAAA
AGTACCTCAGTTAATCATCGGAAACAAGTGTGATTTACATGCTGATAGAC
AGGTCAGCGAGACAGACGTCAAAGCTTTGGCTAGTCTCCATGGGTTACCA
TTTTGGGAGACATCAGCTAAGAGTGAATTAGAAATGGATACCGTTGAAAC
TATATTCCAATCACTTGGGGAGACTTTATTTTATAATACACCTTTGAAAG
ATTTTCCGCCACATTTTTCAACTACCATTCAACAGCAACATCACGCCGGT
CTCCGTGTAAACCAGTCCTTATCTCAATCTTCTGATGACATCACCAAAAA
GAATTCTGTGAAATTGAAAAGGAAAAGTCGGAAAAGTCGGAAAAAGAAAT
CACCGAATTTGGAAGAAGAGTCGGGTGAGAAAAGTGGATGCTGTAAAACA
GGCTAAGAGATTCCAACGTGGGTAAAACGTGCTTAACTCTGCGTGCAGCT
GCTGGAACTTTTCCCTCAAGAACAGAAGCAACGATAGGTGTCGATTTCAA
AGAAAAACTCATCAAATTTGGTGAAGAAAAAGTAAAGATGTCACAAGATG
AAATCGAAAAAAAGATTGCTGTAAGAACCTTCAAAGTGATAATAATTGTT
GCAATTATGGGATTCCGCGGGACAAGAACGATTTCGACACAGCATGGTAC
CACACTATTACCGGAACGTCCACGCCGTTATTTTCGTTTATGACGTCACA
CGTAAAGCATCTTTTGAGAACATTGAAAAATGGATTGAAGAGTTTCGTTG
CAACGTCATTACGAATTCACAAAAAGTACCTCAGTTAATCATCGGAAACA
AGTGTGATTTACATGCTGATAGACAGGTCAGCGAGACAGACGTCAAAGCT
TTGGCTAGTCTCCATGGGTTACCATTTTGGGAGACATCAGCTAAGAGTGA
ATTAGAAATGGATACCGTTGAAACTATATTCCAATCACTTGGGGAGACTT
TATTTTATAATACACCTTTGAAAGATTTTCCGCCACATTTTTCAACTACC
ATTCAACAGCAACATCACGCCGGTCTCCGTGTAAACCAGTCCTTATCTCA
ATCTTCTGATGACATCACCAAAAAGAATTCTGTGAAATTGAAAAGGAAAA
GTCGGAAAAGTCGGAAAAAGAAATCACCGAATTTGGAAGAAGAGTCGGGT
GAGAAAAGTGGATGCTGTAAAACAGGCTAAGAGATTCCAACGTGGGTAAA
ACGTGCTTAACTCTGCGTGCAGCTGCTGGAACTTTTCCCTCAAGAACAGA
AGCAACGATAGGTGTCGATTTCAAAGAAAAACTCATCAAATTTGGTGAAG
AAAAAGTAAAGATGTCACAAGATGAAATCGAAAAAAAGATTGCTGTAAGA
ACCTTCAAAGTGATAATAATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028437-exon-sc0000678-1575043694:78609..79253 | TCONS_00028437-exon-sc0000678-1575043694:78609..79253 | Clytia hemisphaerica | exon |
| TCONS_00028437-exon-sc0000678-1575043694:72704..72834 | TCONS_00028437-exon-sc0000678-1575043694:72704..72834 | Clytia hemisphaerica | exon |
| TCONS_00028437-exon-sc0000678-1575043694:69330..72095 | TCONS_00028437-exon-sc0000678-1575043694:69330..72095 | Clytia hemisphaerica | exon |
| TCONS_00028437-exon-sc0000678-1510915933:78609..79253 | TCONS_00028437-exon-sc0000678-1510915933:78609..79253 | Clytia hemisphaerica | exon |
| TCONS_00028437-exon-sc0000678-1510915933:72704..72834 | TCONS_00028437-exon-sc0000678-1510915933:72704..72834 | Clytia hemisphaerica | exon |
| TCONS_00028437-exon-sc0000678-1510915933:69330..72095 | TCONS_00028437-exon-sc0000678-1510915933:69330..72095 | Clytia hemisphaerica | exon |
| TCONS_00028437-exon-sc0000678-1491911889:78609..79253 | TCONS_00028437-exon-sc0000678-1491911889:78609..79253 | Clytia hemisphaerica | exon |
| TCONS_00028437-exon-sc0000678-1491911889:72704..72834 | TCONS_00028437-exon-sc0000678-1491911889:72704..72834 | Clytia hemisphaerica | exon |
| TCONS_00028437-exon-sc0000678-1491911889:69330..72095 | TCONS_00028437-exon-sc0000678-1491911889:69330..72095 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000678 | supercontig | sc0000678:69330..79253 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
| GO:0003924 | GTPase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003924 |
GTPase activity |
| molecular_function |
GO:0005525 |
GTP binding |
Blast
BLAST of TCONS_00028437 vs. Swiss-Prot (Human)
Match: RB33B (Ras-related protein Rab-33B OS=Homo sapiens GN=RAB33B PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.024e-59 Identity = 96/176 (54.55%), Postives = 127/176 (72.16%), Query Frame = 3
Query: 621 RTFKVIIIGDSNVGKTCLTLRAAAGTFPSRTEATIGVDFKEKLIKFGEEKVKLQLWDSAGQERFRHSMVPHYYRNVHAVIFVYDVTRKASFENIEKWIEEFRCNVITNSQKVPQLIIGNKCDLHADRQVSETDVKALASLHGLPFWETSAKSELEMDTVETIFQSLGETLFYNTPL 1148
R FK+I+IGDSNVGKTCLT R AG FP RTEATIGVDF+E+ ++ E++K+QLWD+AGQERFR SMV HYYRNVHAV+FVYD+T ASF ++ WIEE + +++ N +P++++GNKCDL + QV + A H +P +ETSAK+ + D VE IF +L L + PL
Sbjct: 32 RIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLAND--IPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKSHKPL 205
The following BLAST results are available for this feature:
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