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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL80244_cuf0 >transcript:BL80244_cuf0-protein ID=transcript:BL80244_cuf0-protein|Name=transcript:BL80244_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=275bp
MPWQLLWNNVCVTYKGKMLYFRNWVKKNILFINDIIDCYGNLMSLSELKS
IVGDHPSLLFQYNALRNAIPSKWIGFPHSKSEAPAIKLLGKEAYLQSNTF
FKNILVSQKAVVPTGQSFWEKRLKQFDFQVVTWKSIWKSLFCITTEPKIR
SLQWKVLHNVYPTRVKLYKQGITDTDKCPSCNSVDYVEHFLYECKCVKPL
WAHIEKLYLINYGTSLSLDLHHVIVGYKLDNLVKFQHINMLILIGKLTIS
KYKYGKYVGTITSLFEQECVLRGIS Run BLAST on NCBI mRNA from alignment at Sc0000023:767739..769133+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL80244_cuf0 ID=transcript:BL80244_cuf0|Name=transcript:BL80244_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1395bp|location=Sequence derived from alignment at Sc0000023:767739..769133+ (Branchiostoma lanceolatum)
TGACAATTGGAACAAAAAATTTTGTAAAATGAAAAAGTTACTTGCTTCCT
GGGCTTCAAGAAACTTAAGTTTGTTAGGCAAAATATTAGTACTTAAAAGC
TTAATTGCATCCCAACTCTCCTACATGTTAAGTGTTCTTGTTCCACCTGA
AAAGTTTCTGAACGATGTTAATTCCATGTTCTACAGGTTTTTGTGGAAAA
AAGATCGTGTGAAACGTAATGTATTAATCCAAGATTACTCTGTAGGTGGT
CTAAAGATGCCTGATATAAAAATCATACATAAAACATTTTTACTAAAATG
GGTTAAGAAATTATTACATCAGACTGACAATGCATATGCTCCTATCTGGA
AAAAAATCCAGTTAAGTTATCTACATAGATTTGGTCCCAATGTTTGTATT
TTTAGGTGTAATTGTAATATGGCACAATTTCAACCCTGTAGCTATATACA
GTCGTTACCTGACTTTTAAAAAAAACTAATACAAACTTGGTACGAAGTTA
AAGAAATTAACACAATAGACGATGTATCAGAGGAGAATATGCCTTGGCAA
CTTTTGTGGAATAATGTATGTGTCACCTATAAAGGTAAAATGTTATATTT
CCGTAATTGGGTTAAGAAAAATATTTTGTTTATCAATGATATTATTGATT
GCTATGGAAATTTGATGTCTTTAAGTGAGTTGAAAAGCATTGTAGGAGAT
CACCCCAGTTTATTATTTCAGTACAATGCACTACGCAATGCTATTCCTTC
CAAATGGATAGGATTTCCTCATTCAAAAAGTGAAGCACCAGCGATCAAAT
TGCTTGGAAAAGAGGCTTACTTGCAAAGCAACACGTTTTTCAAAAATATT
TTAGTCTCACAAAAAGCAGTTGTGCCTACAGGGCAAAGCTTTTGGGAAAA
GCGTCTAAAGCAATTTGACTTTCAAGTTGTTACTTGGAAATCTATATGGA
AATCGTTATTTTGCATTACAACAGAACCAAAAATACGATCCTTGCAGTGG
AAGGTGTTGCATAATGTATACCCTACAAGGGTGAAGTTATATAAACAAGG
TATCACAGACACGGACAAATGTCCGTCATGTAATTCTGTGGACTACGTTG
AACACTTCTTATATGAGTGTAAATGTGTTAAGCCTTTGTGGGCGCATATT
GAAAAACTGTACTTGATTAACTATGGCACATCTTTATCATTAGATTTGCA
TCATGTAATTGTTGGCTATAAACTCGATAACCTTGTCAAATTTCAGCACA
TAAATATGTTGATATTGATTGGAAAACTCACTATTTCAAAGTATAAGTAC
GGAAAATATGTCGGAACGATAACGTCACTTTTTGAGCAAGAGTGTGTACT
GAGAGGTATTTCTTGATTCTTTGTATCATCGTAAATAAAGAATAA Coding sequence (CDS) from alignment at Sc0000023:767739..769133+ >transcript:BL80244_cuf0 ID=transcript:BL80244_cuf0|Name=transcript:BL80244_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=828bp|location=Sequence derived from alignment at Sc0000023:767739..769133+ (Branchiostoma lanceolatum)
ATGCCTTGGCAACTTTTGTGGAATAATGTATGTGTCACCTATAAAGGTAA
AATGTTATATTTCCGTAATTGGGTTAAGAAAAATATTTTGTTTATCAATG
ATATTATTGATTGCTATGGAAATTTGATGTCTTTAAGTGAGTTGAAAAGC
ATTGTAGGAGATCACCCCAGTTTATTATTTCAGTACAATGCACTACGCAA
TGCTATTCCTTCCAAATGGATAGGATTTCCTCATTCAAAAAGTGAAGCAC
CAGCGATCAAATTGCTTGGAAAAGAGGCTTACTTGCAAAGCAACACGTTT
TTCAAAAATATTTTAGTCTCACAAAAAGCAGTTGTGCCTACAGGGCAAAG
CTTTTGGGAAAAGCGTCTAAAGCAATTTGACTTTCAAGTTGTTACTTGGA
AATCTATATGGAAATCGTTATTTTGCATTACAACAGAACCAAAAATACGA
TCCTTGCAGTGGAAGGTGTTGCATAATGTATACCCTACAAGGGTGAAGTT
ATATAAACAAGGTATCACAGACACGGACAAATGTCCGTCATGTAATTCTG
TGGACTACGTTGAACACTTCTTATATGAGTGTAAATGTGTTAAGCCTTTG
TGGGCGCATATTGAAAAACTGTACTTGATTAACTATGGCACATCTTTATC
ATTAGATTTGCATCATGTAATTGTTGGCTATAAACTCGATAACCTTGTCA
AATTTCAGCACATAAATATGTTGATATTGATTGGAAAACTCACTATTTCA
AAGTATAAGTACGGAAAATATGTCGGAACGATAACGTCACTTTTTGAGCA
AGAGTGTGTACTGAGAGGTATTTCTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000023 | genome | Sc0000023:767739..769133 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL80244_cuf0 |
| Biotype | protein_coding |
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