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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96772_cuf0 >transcript:BL96772_cuf0-protein ID=transcript:BL96772_cuf0-protein|Name=transcript:BL96772_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=304bp
LGSSYQPETEGCITCGCSDDGRMVCSGVGCALRNPPCENPVNIAGRCCPE
CADDDEVPEGCQYKDAIIPVGEEYKPNDCTTCTCPAAGAEPECVSMACIA
LYCPNPVKIVGQCCPVCGGCQYGDVVIPVGSTYQPDPCTYCSCEAAGARP
LCAVQDCAAPPCANPVHVPGQCCPVCHNIGCEHAHGLILPGKDYKVDACM
TCTCPFPGEEPMCYTPGCMPPECDTPVQVAGQCCPVCDAPDGCLHEEDFV
IIPVGARIPQQDPCVVCTCPFAGGKPICERLPCPAIACPNAVYLAGVCCP
VCNM Run BLAST on NCBI mRNA from alignment at Sc0000150:442607..448158- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96772_cuf0 ID=transcript:BL96772_cuf0|Name=transcript:BL96772_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=5552bp|location=Sequence derived from alignment at Sc0000150:442607..448158- (Branchiostoma lanceolatum)
TTGGGATCCTCGTACCAGGTGAGATCCAGCACCAAAATATGATCATTGGT
TGACCTCATTACATAAGCGGTCACGACCTCATGACGTAAGAGGTCACCCT
CGTGGTTTGTGGACCATCTTGTCCACCTTCCTTGTCCTATTAGTTGGCTC
ATGCTCCTCTAAAGTTGTGCTCGGTTCCACACTGTATTGCCTTCTCCAAG
TTGTTGTCTTCTGCGCTCTGCACTTACCATTAGAAAACATTTAATGCGAT
TCTCTGATTGACTGGCTGCTGGTTCGAGGTCACGCCCACAAATCTCAGCT
CGATTGAGCAGACCCTCTCCAAGGTGTATACTAAAGCCACGGGTGAGTTT
TTTTTCGTAGGACAATAAGGTCGTTCATGATTCCGTGTGCGCATGCGCAG
CGACATGTTTTGTGGGAAATTTGTCAACGGTGAAGGCCCATGAGACATAA
GCAAAGCACGTCTGGACGTTTTTATGCAAATCAAGACGATGGTCGATACG
AGAACTTTTTAACAAGTCAGGGAACTTTACCTTTGACCCTGCGCACGCGC
ACGCAGAATCGAGAACGGCCTTATAGGTCGCCGTTTAGGTTCTGTGTTCA
TGGCTACCACCTCCTTTGCTACAGCCGGAGACAGAGGGGTGCATAACGTG
CGGCTGCTCGGACGACGGGCGAATGGTTTGCTCGGGCGTGGGCTGTGCGC
TGAGGAACCCGCCCTGTGAAAACCCGGTGAACATCGCGGGCCGGTGCTGC
CCTGAATGTGCGGATGACGATGAAGGTTAGCTTTGGAAACAAGATAACTC
TTTGACATCTTTGAAATCTTTATTCGACATACTACGCTCGCAGACTCTAA
ATGATAGAGTCTGAATTAAAATGGTATTTACAAATGCACAGCATTGAGCA
CTAGTATTTTAACACATTGCTTATAAGCGAATATTTAAAACTTCTCAACT
CGAGAAATTCCGCGAATCTGTCCACACTGTAGGCGTGAACCGGGCTAACT
TACTTAGACTTAGGTCCTCTCGAAACTAGAGGTACATCGGCTAGCAAGCT
CAGGGTAACAGAAACGTGATAAGGGGGATATAAACTCAGTCGCATTCGGG
GGGATAGAAACTCAGTCACCTTTGGGACCGCATTCTCCACGATGCAGCAG
CGACACCTAGCTGCAGTGCGACGTAGAAGCAGTCAGTATTGCCCAGACCA
AGGTTGCAAACGGCAAAAGAAACGTCGGTTAGATATAGTTGTGGAGAAAG
AACTTTGCTATCAAGAATATTCTTCATTGTTCTTGCCAAGTCAGTGGTAG
TTGGGAGAAGTACGACATAGTTGGGTTTTGACTGGAATCTTAAACCATAT
TTGGTAATTAACTTGCTGACGTCATTTCAGTTCCGGAGGGCTGTCAGTAC
AAGGACGCCATCATTCCCGTGGGGGAAGAGTACAAGGTAAGAGCTTGAAC
TGAAATCTATCCGTAAAACCTAGCGTAATAGTGATCACCTGACCAATGTG
ACCAAGTACCACCTTACCAATGTGACCACTTTTTGGTGGTTCCTAAGATA
ATTTTCCCCCACTGACACAAGCACTAAAAATCCAGCATACAGTGACGGCA
TTTTCACATGGACCAGGTGTTATCGGTCTAGTGAGTTGTCCCCTTGGGCG
GTTCTGACGTTGGCCCAATTTACGCACGCGTTTTGAGTCGACTTGGAGCC
ACGTAGACTTCAAGTCGACTGAGAGACTTGGAGTCGACTAAAAAAAACGC
CTGTGTAAACTGAGCCTGTATCTCCCATCTACAGCCGAACGACTGTACGA
CGTGCACCTGTCCAGCCGCCGGAGCAGAACCGGAGTGCGTGAGCATGGCC
TGCATAGCTCTGTACTGCCCCAACCCCGTGAAGATCGTGGGGCAGTGCTG
CCCGGTCTGTGGTGGCTGCCAGTACGGCGACGTCGTCATCCCTGTGGGGT
CAACATATCAGGTGAGACCTGGGACTGACAGAATGGTGTGATCTGCATAT
TTTACATTTGCTAATGTTCATTCCCCGATGAGAGCTAAGTTTAGCCCCCC
TCTCACACTGGGCCCGTGAAGCGTTAGCGACCCGTCGCTGCGTCCTAGAT
TGAATTTGAGTTAGCCTTGAGTTTACAAAGGGAATACCATGCGAAACGTA
CGAATATGACTAAAAAGACAAATCACACATAATTGAAAAAGCGTAAAAAA
AGATTCATTTTTTAACGATGAAATTCGATTATCGCGGTGTCGAATCGCTC
GGTCACAGCGAGGTCGCCAACGTGTCGCGGGTCCAGTGACAGGGGGGGGG
GGCTTTCGACCGGTTGACAGACTCTTGTACGAAGTACGACGGTTTTTTTT
CATTCCTTGACAAAGACAGGAGCGGTTTGTTTGAGTCCAGTACTAGTTCT
CTACAGCATCTGAGAAATGAGAAGTTGGACGTAGTCTTTAGTGTTTTGTT
CATGACTACCTCCTGCTCTGCAGCCGGATCCCTGCACGTACTGTTCCTGT
GAGGCCGCCGGAGCGCGGCCGCTGTGCGCCGTCCAGGACTGCGCGGCCCC
GCCCTGCGCCAACCCCGTGCACGTCCCGGGACAGTGCTGCCCCGTCTGCC
ACAACATCGGCTGTGAGCACGCTCACGGACTCATCCTGCCCGGAAAAGAT
TACAAGGTGAGAGAGAGCTACGACTGACATCTGTCCGTCAAGCCTACATA
TGGACTTAGCTATTCTAGTACCACAGTTCTGTACTTAGCTATCCCAGTAC
TCAAGTTCTCTACTTATCTATCCCAGTGATGCATAGGTCACATTTCCAAA
GCGGGGCCCGGTCGGGTAGCTTGCGGGAACGGAAAATATGATATAAAAGA
CAACAAAAGGCAAAAAAATTATATAAAAAACTACTACTAACTGTAAATTG
TGTATTTTCTTGATATTCATTTATCATTTTTCGTTTTCGCAAGCAGCCCG
GCCGGGCACCGGCTTGAATATGTGACCCTAGCATGACACAGATCTGAATT
CTTCAACTCGTATAAACGTCATTTTGCAAGACACACCAGCTTCGGAGGCA
CGCGGCGGCGACAGGTTATATCACACAAAGTGACGAGGTCCTTCTGTCTT
TCTGGAGGAGCTTCAAAGCTGTCATTTAAAGGGCCAGAAATCATAACTTA
CAACCGCAAGTGAAGTCATCCTCTCCAACTTTTTCTGCTTGGTAAGCGAT
GGACTGGCAATTCACCACTCTTTTGTCCTACTAACGATCTTACGCTAATG
ATGATACTTCACCTGTCGGCCCTGCCCTACAGGTGGATGCCTGCATGACC
TGTACCTGCCCGTTTCCCGGAGAGGAACCGATGTGCTACACCCCAGGTTG
CATGCCTCCGGAGTGTGACACGCCCGTGCAAGTCGCAGGGCAGTGCTGCC
CAGTCTGTGACGGTTAGCTTGTTTTTACCTATCAACATTATAACAACGTA
ACACAGTGGCAAAACATTAAGGCAAGAAGGGCAAATCCAGAAAGTTCCAC
TTAACTTCTAAAACTTTTTCTCCCGACTAGTTTTGGCTGAAGAAACGTCG
GACAAAAAATTGGTGTCTGTGGAACTGCAGTCGTCTTTAAAATGATTTTT
GTTTTCGTGGTGGTTATTAAAATGTAATCGAGCAGGAAGGCGTGTAGGAG
TTGTTGAAACAATGTGTACATGGATTGAGCAAAGGAAGAGGTTGGGACCT
CTAAAGACTTGAAACCATCTTAACGGTCAACTTAATGACGTCATTTCAGC
TCCGGATGGCTGTCTCCATGAGGAAGATTTCGTCATCATTCCTGTGGGGG
CCAGGATCCCGGTAAGTTTGTCTGACGGTTGTCTGTTAAACCTGTCATAA
GGGGTTAAAACTCTCGGATATAGGGAATTACATATGATCGATTGATAGAT
TCAACTTTATTCTAGGGGGGGAGATAACCCTTACTCTATACGAATAGGTC
AATATATCAAAGAATGTCTAGATCTTAGAACCAATTGTGTAAACGATACG
TTGGACTCAACATGTTGCTTTACTCATATCTATTTATGTACTTCTATATA
TAAGTTAACTCATTTGTATCCACTTGACTGTTTGTGCGTATAGATGTGTT
AGACCTTACGAAAGTCGCTGTACTTTTATTGTGTCAATAAAGATTTCATA
TGATCTCAGGGGGTGTCCCTGTGGTGCAGTGGTCTGCACTTCTGTTGCTA
GCCACATCTGGTTCAAATTACTTGGACCAGAAGGCTCGGGTTCAAGCCCC
GGGTAGGACAACTTTGGACAAGAGGCGCATTAAGTCAGACCAAATACTTT
AGAAAAATGATACATACTTCTGAAACAGTATGGAAGTTAAACACACTCCA
CTGCCAGTGGACTAGCCCCCTGCTGTAGTGATTGCACCACAGTGTGTCCC
AGGGCTATGAAACGGAGATGGACACCGCACTATACACCTTATGTTGTGGG
AGGATTTTAACTAACTAAATGATCTCAGGAGATCGAGTGAACTTTTGTAA
CGGTCCCTGGCTGGCTATGGATTCAACTCAGTACTGCTAAATGTACTTCG
GTAGGCTTAGGGTGGGCTTGTGTTCTGTGATTATTCTTCTAGTAATTTGG
CCTATCTCTTCTGGAGGGTGTAAAGCTTTCATTTTGGGGGAAAAGACGTG
AATTTGGGTATGCTGGAATACTATGCCTTCTTAGTCTTTGTAGATACAAC
TTGAACTAGTATACATGTACAGATCTTGTTTCAAGATTCTGAAGTTTTTA
TTTGTTATTACTTCCAACCTTATAGCAACAGGATCCCTGCGTCGTCTGCA
CCTGCCCCTTTGCCGGAGGGAAGCCCATTTGCGAGCGCTTACCCTGCCCA
GCCATTGCCTGCCCCAACGCTGTTTACCTCGCGGGTGTGTGCTGCCCGGT
CTGCAACATGTAGGATCATCTCTGCCTCGGCTACAGATCCGAAGGTCCGG
GATCTGTGATCACGATTTTGTAGTCTGTAACTAGATGTAGATCAACGTGT
TGGATCAATTTTTTGTCACCTAGATGGCGTTTCGGGATCTATGATCTTGC
CGATGTAACATGTACAGTAACTAGATCGACTATGGAATAACCTCCTAGTC
TGCTGGTTTATATAGGGTACGGGTACGGCATTCGTGATCGCATCCTTGTA
ATCTACAACTAGACCGTGCTTTGCGAATATCCGACGGCATTGAGTCTTCT
ATAACGTTATTTATTTATATGCGAATGAAAATTTGATGGTCATATTACCG
TCTGCAATAGTACTTGTAAGGGCACCAAGATATTGTCTTCTTCATGTTAA
CGTGAACATTAGAAAGAAAACGGTCATTCTTGGCGACCGTGTAGAAAAAG
GTCACAGGAAGAGCTGAACAAATATTGAATACATCGAGATTTAAAAGCAA
TACTGTTCCATTCGGAGGTCCATTCCTCCCTTTTTAAATCCTATTTTCTG
TCCTCTTTCAGGTAACTCAGTGATTAAGTGGGAAGGAGGCGGGATGTCTG
GAACGACAGCGGCGAATTGTCAAAAGTTTCCCCGAATAAAATTAACTGCA
GC Coding sequence (CDS) from alignment at Sc0000150:442607..448158- >transcript:BL96772_cuf0 ID=transcript:BL96772_cuf0|Name=transcript:BL96772_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=915bp|location=Sequence derived from alignment at Sc0000150:442607..448158- (Branchiostoma lanceolatum)
TTGGGATCCTCGTACCAGCCGGAGACAGAGGGGTGCATAACGTGCGGCTG
CTCGGACGACGGGCGAATGGTTTGCTCGGGCGTGGGCTGTGCGCTGAGGA
ACCCGCCCTGTGAAAACCCGGTGAACATCGCGGGCCGGTGCTGCCCTGAA
TGTGCGGATGACGATGAAGTTCCGGAGGGCTGTCAGTACAAGGACGCCAT
CATTCCCGTGGGGGAAGAGTACAAGCCGAACGACTGTACGACGTGCACCT
GTCCAGCCGCCGGAGCAGAACCGGAGTGCGTGAGCATGGCCTGCATAGCT
CTGTACTGCCCCAACCCCGTGAAGATCGTGGGGCAGTGCTGCCCGGTCTG
TGGTGGCTGCCAGTACGGCGACGTCGTCATCCCTGTGGGGTCAACATATC
AGCCGGATCCCTGCACGTACTGTTCCTGTGAGGCCGCCGGAGCGCGGCCG
CTGTGCGCCGTCCAGGACTGCGCGGCCCCGCCCTGCGCCAACCCCGTGCA
CGTCCCGGGACAGTGCTGCCCCGTCTGCCACAACATCGGCTGTGAGCACG
CTCACGGACTCATCCTGCCCGGAAAAGATTACAAGGTGGATGCCTGCATG
ACCTGTACCTGCCCGTTTCCCGGAGAGGAACCGATGTGCTACACCCCAGG
TTGCATGCCTCCGGAGTGTGACACGCCCGTGCAAGTCGCAGGGCAGTGCT
GCCCAGTCTGTGACGCTCCGGATGGCTGTCTCCATGAGGAAGATTTCGTC
ATCATTCCTGTGGGGGCCAGGATCCCGCAACAGGATCCCTGCGTCGTCTG
CACCTGCCCCTTTGCCGGAGGGAAGCCCATTTGCGAGCGCTTACCCTGCC
CAGCCATTGCCTGCCCCAACGCTGTTTACCTCGCGGGTGTGTGCTGCCCG
GTCTGCAACATGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000150 | genome | Sc0000150:442607..448158 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96772_cuf0 |
| Biotype | protein_coding |
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