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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95855_evm1 >transcript:BL95855_evm1-protein ID=transcript:BL95855_evm1-protein|Name=transcript:BL95855_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=316bp
MESLPEFTEDLRQRPRTVAVGRRDWGEPGPPSMLFDRAARAHSCRAPWAQ
DRTAVRNMELSYIWSSMSLTRPPSSTFGGPPPTRAAAGGRRLSRLSKMSS
SSVMKPKTPSKLLYESDATTTSEAGKVYWPRGLTVSQTGDIFVADTANHR
IQVYTPCAIHKASFGSFGTGTVTQLVKFYDYDGDLQSQFRPAVRQGVGVR
VIPRGIFCDRVDNIFLVDGLNHTVNYYSDNGWHLEQMLTSAHELGTPQAV
ALTPEKHLVVTECSVNGSHCVKIFHGFSCECHKSRPGSVKRKSAGLQPAK
SAPAAMISMGISAIRE Run BLAST on NCBI mRNA from alignment at Sc0000165:499965..502018- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95855_evm1 ID=transcript:BL95855_evm1|Name=transcript:BL95855_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2054bp|location=Sequence derived from alignment at Sc0000165:499965..502018- (Branchiostoma lanceolatum)
ATGGAGAGCCTTCCGGAATTCACCGAGGACCTGCGGCAGCGGCCCCGGAC
GGTGGCGGTGGGAAGGCGGGACTGGGGGGAGCCGGGGCCGCCGTCGATGT
TGTTTGACAGGGCCGCACGAGGTGAGACAACATGGACTTATTTATCAGGC
GGATATCGAAGTCATCCCTACGTTAATCTCGACCTTTATGAGTATTGATT
GATTATTCCATATGGTGTGTTTCAAGCGATCGTTTACTAACGTCGCCATG
GTATGATGATGGCTACACAAACAGGTTTACAGGTGGCACCGACTCAATAA
CAATCACTATCTAGTCCGCCATCCTATCAGAGTGTGTCTAGATATGCACC
AAATCTATGTTGATCCGTGTTAAGTCGGATAACTTATGGTTTATTCCCAG
CAGTAACATTATATGTAAACTTTCTTAAGATCACTTAAGACGATGTCAAG
TCAAATGCTCATGATTTTGTACATGTATTTACAAACGAAGGAACATAACT
AGAGGGAGTAAGGGACCAGCTCCCGGCCAAGGCAGGTACAGGTAGTTACA
AAACATTTACGTGTCTCCTATTGCAGCCCACAGTTGCCGAGCCCCCTGGG
CACAGGACCGTACCGCTGTGAGGAACATGGAACTGTCCTACATCTGGTCC
AGCATGTCCCTTACCAGACCCCCCTCCAGCACCTTTGGTGGACCGCCCCC
CACAAGAGCTGCGGCAGGGGGGCGCAGACTCTCCAGATTATCGAAAATGT
CTTCAAGCAGTGTCATGAAACCAAAGTGAGTCAGTTTGGCTTTGTTTAAT
AAGGTCTTTGATATCCTGGAATTCAGAAGGGAGTTGTGACTAAGATGTAC
AAATACACTAGCAGCTAATTACATGTTTACAACAAGTAGCTAATTGCATG
TTTACATGAACATTTACATTGCAGCTAATTGAATATTTACATCTAGCATC
ATATGTTTACTTCATCTGTTATTTTCAGCAAGTAGGACTTTGATACTTGG
CCTCTCCATATTGAGATGTTAAATCAATGCAGAAAATGATTGAAGAAACC
CTTGAATTTTTTTCATGGTTGTGACAAAGACTTTTCTTTTGCACAGAACA
CCTTCCAAGCTGCTGTATGAGTCTGATGCCACTACAACAAGTGAGGCTGG
GAAAGTGTACTGGCCACGTGGCCTCACTGTCAGCCAGACAGGGGACATCT
TCGTGGCAGACACTGCCAACCATCGCATCCAAGTCTACACCCCCTGTGCC
ATCCACAAGGCTAGCTTTGGCTCTTTTGGGACAGGAACTGGTCAGTTTGA
CCAGCCTAGTGCAGTGGCCATGTGTGGGGACCATCACATCGCTGTGGCAG
ATATGAAGAACAAACGTGTGCAAGTCCTGTCTGAAAACGGTCGCCCAAAG
TGCATGTTCCATACCCAATGGGAACCTCATAGCATTGTATGTGACCCTGA
CAGAAACATCATTGTGGCAAACAGCAACAACAAGATTGAGGTGTACTTCC
CAGATGGTGAACTGTACACAACTTTTAAAGTAAATGAGAGGCTACCGTAT
AGGAGCTATCAGTGGCCTTTATTTGTTACCCAGAACACGAGAAATGAAAT
TGTCGTTTCTGATCCAGTCACCCAGCTTGTCAAGTTCTATGACTATGACG
GAGACCTGCAGTCCCAGTTCAGGCCTGCGGTGCGGCAAGGGGTCGGCGTA
CGGGTCATCCCTCGTGGGATTTTCTGTGACCGCGTTGATAACATCTTCCT
GGTGGATGGACTGAACCACACCGTGAACTACTACAGCGATAACGGCTGGC
ACCTGGAGCAGATGCTGACGTCTGCCCACGAGCTGGGTACTCCTCAGGCC
GTGGCGCTGACCCCGGAGAAACACCTGGTGGTGACGGAGTGCAGCGTCAA
TGGCAGTCACTGTGTCAAAATCTTCCACGGCTTCTCTTGTGAGTGTCACA
AGTCCCGCCCGGGGTCGGTGAAGCGAAAGTCAGCTGGCTTACAGCCCGCG
AAGAGTGCCCCCGCAGCCATGATATCAATGGGTATTTCTGCAATACGAGA
ATAA Coding sequence (CDS) from alignment at Sc0000165:499965..502018- >transcript:BL95855_evm1 ID=transcript:BL95855_evm1|Name=transcript:BL95855_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=3804bp|location=Sequence derived from alignment at Sc0000165:499965..502018- (Branchiostoma lanceolatum)
ATGGAGAGCCTTCCGGAATTCACCGAGGACCTGCGGCAGCGGCCCCGGAC
GGTGGCGGTGGGAAGGCGGGACTGGGGGGAGCCGGGGCCGCCGTCGATGT
TGTTTGACAGGGCCGCACGAGCCCACAGTTGCCGAGCCCCCTGGGCACAG
GACCGTACCGCTGTGAGGAACATGGAACTGTCCTACATCTGGTCCAGCAT
GTCCCTTACCAGACCCCCCTCCAGCACCTTTGGTGGACCGCCCCCCACAA
GAGCTGCGGCAGGGGGGCGCAGACTCTCCAGATTATCGAAAATGTCTTCA
AGCAGTGTCATGAAACCAAAAACACCTTCCAAGCTGCTGTATGAGTCTGA
TGCCACTACAACAAGTGAGGCTGGGAAAGTGTACTGGCCACGTGGCCTCA
CTGTCAGCCAGACAGGGGACATCTTCGTGGCAGACACTGCCAACCATCGC
ATCCAAGTCTACACCCCCTGTGCCATCCACAAGGCTAGCTTTGGCTCTTT
TGGGACAGGAACTGTCACCCAGCTTGTCAAGTTCTATGACTATGACGGAG
ACCTGCAGTCCCAGTTCAGGCCTGCGGTGCGGCAAGGGGTCGGCGTACGG
GTCATCCCTCGTGGGATTTTCTGTGACCGCGTTGATAACATCTTCCTGGT
GGATGGACTGAACCACACCGTGAACTACTACAGCGATAACGGCTGGCACC
TGGAGCAGATGCTGACGTCTGCCCACGAGCTGGGTACTCCTCAGGCCGTG
GCGCTGACCCCGGAGAAACACCTGGTGGTGACGGAGTGCAGCGTCAATGG
CAGTCACTGTGTCAAAATCTTCCACGGCTTCTCTTGTGAGTGTCACAAGT
CCCGCCCGGGGTCGGTGAAGCGAAAGTCAGCTGGCTTACAGCCCGCGAAG
AGTGCCCCCGCAGCCATGATATCAATGGGTATTTCTGCAATACGAGAATA
AATGGAGAGCCTTCCGGAATTCACCGAGGACCTGCGGCAGCGGCCCCGGA
CGGTGGCGGTGGGAAGGCGGGACTGGGGGGAGCCGGGGCCGCCGTCGATG
TTGTTTGACAGGGCCGCACGAGCCCACAGTTGCCGAGCCCCCTGGGCACA
GGACCGTACCGCTGTGAGGAACATGGAACTGTCCTACATCTGGTCCAGCA
TGTCCCTTACCAGACCCCCCTCCAGCACCTTTGGTGGACCGCCCCCCACA
AGAGCTGCGGCAGGGGGGCGCAGACTCTCCAGATTATCGAAAATGTCTTC
AAGCAGTGTCATGAAACCAAAAACACCTTCCAAGCTGCTGTATGAGTCTG
ATGCCACTACAACAAGTGAGGCTGGGAAAGTGTACTGGCCACGTGGCCTC
ACTGTCAGCCAGACAGGGGACATCTTCGTGGCAGACACTGCCAACCATCG
CATCCAAGTCTACACCCCCTGTGCCATCCACAAGGCTAGCTTTGGCTCTT
TTGGGACAGGAACTGTCACCCAGCTTGTCAAGTTCTATGACTATGACGGA
GACCTGCAGTCCCAGTTCAGGCCTGCGGTGCGGCAAGGGGTCGGCGTACG
GGTCATCCCTCGTGGGATTTTCTGTGACCGCGTTGATAACATCTTCCTGG
TGGATGGACTGAACCACACCGTGAACTACTACAGCGATAACGGCTGGCAC
CTGGAGCAGATGCTGACGTCTGCCCACGAGCTGGGTACTCCTCAGGCCGT
GGCGCTGACCCCGGAGAAACACCTGGTGGTGACGGAGTGCAGCGTCAATG
GCAGTCACTGTGTCAAAATCTTCCACGGCTTCTCTTGTGAGTGTCACAAG
TCCCGCCCGGGGTCGGTGAAGCGAAAGTCAGCTGGCTTACAGCCCGCGAA
GAGTGCCCCCGCAGCCATGATATCAATGGGTATTTCTGCAATACGAGAAT
AAATGGAGAGCCTTCCGGAATTCACCGAGGACCTGCGGCAGCGGCCCCGG
ACGGTGGCGGTGGGAAGGCGGGACTGGGGGGAGCCGGGGCCGCCGTCGAT
GTTGTTTGACAGGGCCGCACGAGCCCACAGTTGCCGAGCCCCCTGGGCAC
AGGACCGTACCGCTGTGAGGAACATGGAACTGTCCTACATCTGGTCCAGC
ATGTCCCTTACCAGACCCCCCTCCAGCACCTTTGGTGGACCGCCCCCCAC
AAGAGCTGCGGCAGGGGGGCGCAGACTCTCCAGATTATCGAAAATGTCTT
CAAGCAGTGTCATGAAACCAAAAACACCTTCCAAGCTGCTGTATGAGTCT
GATGCCACTACAACAAGTGAGGCTGGGAAAGTGTACTGGCCACGTGGCCT
CACTGTCAGCCAGACAGGGGACATCTTCGTGGCAGACACTGCCAACCATC
GCATCCAAGTCTACACCCCCTGTGCCATCCACAAGGCTAGCTTTGGCTCT
TTTGGGACAGGAACTGTCACCCAGCTTGTCAAGTTCTATGACTATGACGG
AGACCTGCAGTCCCAGTTCAGGCCTGCGGTGCGGCAAGGGGTCGGCGTAC
GGGTCATCCCTCGTGGGATTTTCTGTGACCGCGTTGATAACATCTTCCTG
GTGGATGGACTGAACCACACCGTGAACTACTACAGCGATAACGGCTGGCA
CCTGGAGCAGATGCTGACGTCTGCCCACGAGCTGGGTACTCCTCAGGCCG
TGGCGCTGACCCCGGAGAAACACCTGGTGGTGACGGAGTGCAGCGTCAAT
GGCAGTCACTGTGTCAAAATCTTCCACGGCTTCTCTTGTGAGTGTCACAA
GTCCCGCCCGGGGTCGGTGAAGCGAAAGTCAGCTGGCTTACAGCCCGCGA
AGAGTGCCCCCGCAGCCATGATATCAATGGGTATTTCTGCAATACGAGAA
TAAATGGAGAGCCTTCCGGAATTCACCGAGGACCTGCGGCAGCGGCCCCG
GACGGTGGCGGTGGGAAGGCGGGACTGGGGGGAGCCGGGGCCGCCGTCGA
TGTTGTTTGACAGGGCCGCACGAGCCCACAGTTGCCGAGCCCCCTGGGCA
CAGGACCGTACCGCTGTGAGGAACATGGAACTGTCCTACATCTGGTCCAG
CATGTCCCTTACCAGACCCCCCTCCAGCACCTTTGGTGGACCGCCCCCCA
CAAGAGCTGCGGCAGGGGGGCGCAGACTCTCCAGATTATCGAAAATGTCT
TCAAGCAGTGTCATGAAACCAAAAACACCTTCCAAGCTGCTGTATGAGTC
TGATGCCACTACAACAAGTGAGGCTGGGAAAGTGTACTGGCCACGTGGCC
TCACTGTCAGCCAGACAGGGGACATCTTCGTGGCAGACACTGCCAACCAT
CGCATCCAAGTCTACACCCCCTGTGCCATCCACAAGGCTAGCTTTGGCTC
TTTTGGGACAGGAACTGTCACCCAGCTTGTCAAGTTCTATGACTATGACG
GAGACCTGCAGTCCCAGTTCAGGCCTGCGGTGCGGCAAGGGGTCGGCGTA
CGGGTCATCCCTCGTGGGATTTTCTGTGACCGCGTTGATAACATCTTCCT
GGTGGATGGACTGAACCACACCGTGAACTACTACAGCGATAACGGCTGGC
ACCTGGAGCAGATGCTGACGTCTGCCCACGAGCTGGGTACTCCTCAGGCC
GTGGCGCTGACCCCGGAGAAACACCTGGTGGTGACGGAGTGCAGCGTCAA
TGGCAGTCACTGTGTCAAAATCTTCCACGGCTTCTCTTGTGAGTGTCACA
AGTCCCGCCCGGGGTCGGTGAAGCGAAAGTCAGCTGGCTTACAGCCCGCG
AAGAGTGCCCCCGCAGCCATGATATCAATGGGTATTTCTGCAATACGAGA
ATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000165 | genome | Sc0000165:499965..502018 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95855_evm1 |
| Biotype | protein_coding |
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