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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95878_evm1 >transcript:BL95878_evm1-protein ID=transcript:BL95878_evm1-protein|Name=transcript:BL95878_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=264bp
MAHRVPCVLTVFVTFVFLCSAQPTVDFKPPPDDKCVCNVNCGDNSAQKSG
LDQLRIAVNQLSEKMDRSAEPTQQDEVLQPTTESVSNFTTRPVAMTTTIT
PSQGPSLACEGPVTSFSGRQTIRDDLGTDGALLRDHSFSPDNADKVWYLP
TPSGNTIEEYRTMDDFAAGNVLTTYRLPGSAGSGGMAWWGQGHVVYNNAL
YFQRFPDCLSYRYDCSNEKAQIVRYEFSLRAFTALQALPTAQLSHWAAGP
SYVYLAVDAATGIC Run BLAST on NCBI mRNA from alignment at Sc0000191:353514..356253+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95878_evm1 ID=transcript:BL95878_evm1|Name=transcript:BL95878_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2740bp|location=Sequence derived from alignment at Sc0000191:353514..356253+ (Branchiostoma lanceolatum)
ATGGCGCACCGTGTTCCCTGTGTGTTAACGGTCTTTGTGACGTTTGTGTT
CCTGTGCTCTGCTCAGCCGACGGTCGACTTCAAACCACCGCCAGACGACA
AATGTGTGTGTAATGTCAACTGTGGGGACAACAGCGCACAGAAATCAGGG
CTGGATCAGCTAAGAATCGCCGTCAACCAACTTTCAGAGAAAATGGATAG
GTCTGCAGGTGAGCCAGCTCATCTTAGAGACATTTACTTATTACTGTATT
TATATGAAAAGTAACGACGCTAAGAATTAATGTTTACTTTGAACTAGAGA
GCGGGTTTACTACATGTTACAATCAGGTAGTAAAATTAATTTGAGTTTTT
TTCTTTTTAATTTTTATGGTGGTTTCTTTGACAGAACCCACACAACAGGA
TGAGGTGCTGCAGCCGACGACAGAGAGTGTCTCAAACTTTACAACTCGAC
CAGTTGCCATGACGACAACAATAACACCGTCGCAAGGTACGTTTGTATTA
AAGGTTATGGGTACCTCGGTTCGGCATCTGATAATGTCACTCTAAGCTTG
CGTTGCAAACGTCTCCGCAGCTTTGAGAAGAGGTGCCTATTGTTGCTAAA
CTAAAAAAATATTCTTCTCGAGCCCGAATTTAGCCATGTATTACTCTCAC
AAACATGTATTTTGTATATGCGTCGATGAAGGAGATTAGATATGGAAATA
ACTAGTATATCTATTATCATGCATGGATCTTGAACCAAATTCGTTGCGTC
CATGCTTGCATGGCCATGCTTGCATAGTCATGCTTGCATAGTTATGCTTG
CATGATCATGCTTGATGCTTGCGCGCTCTTGCGGCGCTCTTAGTTTGGGC
GCTCTTAGGGCCCTGTTACACTTGTGCGTATATTCAAGTGCGCATGATTT
GCGCAGTAGGTTCAAGGAAAGTTTGCGGGGAAGGAGTTGTTTTCTGCGTC
GACCCACCGATGTGCAGCCTAGTTATCGAACCAAGGAAATGACTTCTTGG
GCTGAAAACTCAATCTTGACCAAAAACATGTTGATACGCAACTCATGCGG
ACTTGCATATACGCGCAAGTGTGAAAGGGGCTTTACAGCGCTAAACTGCG
CTCGCTGCGCGCTCTCACGGCGCTCAGCGTGCCCATAACAGACCTTTCAA
ACACAAATTTCATACAAGTTAACACAAAGTTAACAAATCCTGTTATGTCA
TTGTGACTTTTTTTCTCACTTTCATGATCGATGCCAAAAGAATCGTAAGG
AAGCTTGTTTATAGGCCGCAACTAATGATTTGCTCACGGAAACTATTGCA
TTGAATCTTTTGTAGGCCCATCCCTGGCCTGTGAGGGACCGGTAACGTCT
TTCTCTGGTAGACAGACGATCAGAGACGACCTCGGCACCGACGGCGCTCT
CCTTCGCGATCATTCCTTCTCACCGGACAACGCCGACAAAGTCTGGTACC
TTCCGACACCTTCCGGGAACACCATCGAGGAGTACCGCACGATGGACGAC
TTTGCTGCGGGAAACGTCCTGACCACATACCGCCTGCCCGGGTCGGCAGG
CAGCGGTGGAATGGCGTGGTGGGGACAGGGCCATGTAGTCTACAACAACG
CCCTCTACTTCCAACGATTCCCCGACTGCCTGTCGTATAGATATGACTGT
AGCAACGAAAAGGCGCAGATAGTCAGGTACGAGTTTAGTCTCAGGGCTTT
TACGGCGCTCCAAGCGCTTCCTACCGCTCAGCTGTCTCACTGGGCCGCGG
GCCCGTCTTACGTCTACCTCGCCGTCGATGCGGGTAGTGTGTGGGCTATC
GGTGTTAGCAATGATACATTCCAGCTGACTAAGCTTAACGCAAACGACCT
TAGTGTAGAAGAGGTCGTAGATACAGAATTCACAGACACGTCTTCGAACA
TGCCTCCGTTTATTGCTTGTGGGAAATTTTATAGTACTATACCTTATCGC
ATTTTTCAACTCGGCCCACCCTCTCAAACCAATCTTATTCTCGATCTAAC
CACTAAGCAAAAAGACACTTCTACAAGAGCATGCTATTGCTTGGCTACTG
TAGGTCGACGCTATTTCTCGATCAATTCTCGCGAGAACAAAGTGTACACC
GTCGAGTCCAATGCTTTGGTCAGCTATGACGTAACCTTCGGCGGATCATA
TTTATCTGAGACCGCTACATGTGATGTTTAAGGTGTGTACGCACTTAAAC
ATATTCTAACACCTACGTACATGTTCTGCTTAATGTCTGTTCACAATTAA
TAATATTCTAGCACCTACATGTACATGTTCTGTTTAATGTGTGTTCACAA
TCAATCATGTTCTAGCACCTACATGTACATGTTCTGTTTAAATTGTGTTC
ACAATCAATCATGTTCTAGCACCTACATGTACATGTTCTGTTTAATGTGT
GTTCACAATCAATAATATTCTAGCACCTACATGTACATGTTCTGTTTAAT
GTGTGTTCACAATCAATCATGTTCTAGCACCTACATGTACATGTTCTGTT
TAATGTGTGTTCACAATCAATCATGTTCTAGCACCTACATGTACATGTTC
TGTTTAATTGTGTTCACAATCAATCATGATCTAGNATCATGTTCTAGCAC
CTACATGTTCATGTTCTGTTTAATGTGTGTTCACAATTACTACTAGTAAT
CATATTATAACACCATAACAAGCATTAGCTCTGTGTAATTTTGTTCAATA
ACATTCATGTTTGTTTCATACAGCAACCGGAATTTGTTAA Coding sequence (CDS) from alignment at Sc0000191:353514..356253+ >transcript:BL95878_evm1 ID=transcript:BL95878_evm1|Name=transcript:BL95878_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=3180bp|location=Sequence derived from alignment at Sc0000191:353514..356253+ (Branchiostoma lanceolatum)
ATGGCGCACCGTGTTCCCTGTGTGTTAACGGTCTTTGTGACGTTTGTGTT
CCTGTGCTCTGCTCAGCCGACGGTCGACTTCAAACCACCGCCAGACGACA
AATGTGTGTGTAATGTCAACTGTGGGGACAACAGCGCACAGAAATCAGGG
CTGGATCAGCTAAGAATCGCCGTCAACCAACTTTCAGAGAAAATGGATAG
GTCTGCAGAACCCACACAACAGGATGAGGTGCTGCAGCCGACGACAGAGA
GTGTCTCAAACTTTACAACTCGACCAGTTGCCATGACGACAACAATAACA
CCGTCGCAAGGCCCATCCCTGGCCTGTGAGGGACCGGTAACGTCTTTCTC
TGGTAGACAGACGATCAGAGACGACCTCGGCACCGACGGCGCTCTCCTTC
GCGATCATTCCTTCTCACCGGACAACGCCGACAAAGTCTGGTACCTTCCG
ACACCTTCCGGGAACACCATCGAGGAGTACCGCACGATGGACGACTTTGC
TGCGGGAAACGTCCTGACCACATACCGCCTGCCCGGGTCGGCAGGCAGCG
GTGGAATGGCGTGGTGGGGACAGGGCCATGTAGTCTACAACAACGCCCTC
TACTTCCAACGATTCCCCGACTGCCTGTCGTATAGATATGACTGTAGCAA
CGAAAAGGCGCAGATAGTCAGGTACGAGTTTAGTCTCAGGGCTTTTACGG
CGCTCCAAGCGCTTCCTACCGCTCAGCTGTCTCACTGGGCCGCGGGCCCG
TCTTACGTCTACCTCGCCGTCGATGCGGCAACCGGAATTTGTTAAATGGC
GCACCGTGTTCCCTGTGTGTTAACGGTCTTTGTGACGTTTGTGTTCCTGT
GCTCTGCTCAGCCGACGGTCGACTTCAAACCACCGCCAGACGACAAATGT
GTGTGTAATGTCAACTGTGGGGACAACAGCGCACAGAAATCAGGGCTGGA
TCAGCTAAGAATCGCCGTCAACCAACTTTCAGAGAAAATGGATAGGTCTG
CAGAACCCACACAACAGGATGAGGTGCTGCAGCCGACGACAGAGAGTGTC
TCAAACTTTACAACTCGACCAGTTGCCATGACGACAACAATAACACCGTC
GCAAGGCCCATCCCTGGCCTGTGAGGGACCGGTAACGTCTTTCTCTGGTA
GACAGACGATCAGAGACGACCTCGGCACCGACGGCGCTCTCCTTCGCGAT
CATTCCTTCTCACCGGACAACGCCGACAAAGTCTGGTACCTTCCGACACC
TTCCGGGAACACCATCGAGGAGTACCGCACGATGGACGACTTTGCTGCGG
GAAACGTCCTGACCACATACCGCCTGCCCGGGTCGGCAGGCAGCGGTGGA
ATGGCGTGGTGGGGACAGGGCCATGTAGTCTACAACAACGCCCTCTACTT
CCAACGATTCCCCGACTGCCTGTCGTATAGATATGACTGTAGCAACGAAA
AGGCGCAGATAGTCAGGTACGAGTTTAGTCTCAGGGCTTTTACGGCGCTC
CAAGCGCTTCCTACCGCTCAGCTGTCTCACTGGGCCGCGGGCCCGTCTTA
CGTCTACCTCGCCGTCGATGCGGCAACCGGAATTTGTTAAATGGCGCACC
GTGTTCCCTGTGTGTTAACGGTCTTTGTGACGTTTGTGTTCCTGTGCTCT
GCTCAGCCGACGGTCGACTTCAAACCACCGCCAGACGACAAATGTGTGTG
TAATGTCAACTGTGGGGACAACAGCGCACAGAAATCAGGGCTGGATCAGC
TAAGAATCGCCGTCAACCAACTTTCAGAGAAAATGGATAGGTCTGCAGAA
CCCACACAACAGGATGAGGTGCTGCAGCCGACGACAGAGAGTGTCTCAAA
CTTTACAACTCGACCAGTTGCCATGACGACAACAATAACACCGTCGCAAG
GCCCATCCCTGGCCTGTGAGGGACCGGTAACGTCTTTCTCTGGTAGACAG
ACGATCAGAGACGACCTCGGCACCGACGGCGCTCTCCTTCGCGATCATTC
CTTCTCACCGGACAACGCCGACAAAGTCTGGTACCTTCCGACACCTTCCG
GGAACACCATCGAGGAGTACCGCACGATGGACGACTTTGCTGCGGGAAAC
GTCCTGACCACATACCGCCTGCCCGGGTCGGCAGGCAGCGGTGGAATGGC
GTGGTGGGGACAGGGCCATGTAGTCTACAACAACGCCCTCTACTTCCAAC
GATTCCCCGACTGCCTGTCGTATAGATATGACTGTAGCAACGAAAAGGCG
CAGATAGTCAGGTACGAGTTTAGTCTCAGGGCTTTTACGGCGCTCCAAGC
GCTTCCTACCGCTCAGCTGTCTCACTGGGCCGCGGGCCCGTCTTACGTCT
ACCTCGCCGTCGATGCGGCAACCGGAATTTGTTAAATGGCGCACCGTGTT
CCCTGTGTGTTAACGGTCTTTGTGACGTTTGTGTTCCTGTGCTCTGCTCA
GCCGACGGTCGACTTCAAACCACCGCCAGACGACAAATGTGTGTGTAATG
TCAACTGTGGGGACAACAGCGCACAGAAATCAGGGCTGGATCAGCTAAGA
ATCGCCGTCAACCAACTTTCAGAGAAAATGGATAGGTCTGCAGAACCCAC
ACAACAGGATGAGGTGCTGCAGCCGACGACAGAGAGTGTCTCAAACTTTA
CAACTCGACCAGTTGCCATGACGACAACAATAACACCGTCGCAAGGCCCA
TCCCTGGCCTGTGAGGGACCGGTAACGTCTTTCTCTGGTAGACAGACGAT
CAGAGACGACCTCGGCACCGACGGCGCTCTCCTTCGCGATCATTCCTTCT
CACCGGACAACGCCGACAAAGTCTGGTACCTTCCGACACCTTCCGGGAAC
ACCATCGAGGAGTACCGCACGATGGACGACTTTGCTGCGGGAAACGTCCT
GACCACATACCGCCTGCCCGGGTCGGCAGGCAGCGGTGGAATGGCGTGGT
GGGGACAGGGCCATGTAGTCTACAACAACGCCCTCTACTTCCAACGATTC
CCCGACTGCCTGTCGTATAGATATGACTGTAGCAACGAAAAGGCGCAGAT
AGTCAGGTACGAGTTTAGTCTCAGGGCTTTTACGGCGCTCCAAGCGCTTC
CTACCGCTCAGCTGTCTCACTGGGCCGCGGGCCCGTCTTACGTCTACCTC
GCCGTCGATGCGGCAACCGGAATTTGTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000191 | genome | Sc0000191:353514..356253 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95878_evm1 |
| Biotype | protein_coding |
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