transcript:BL68756_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL68756_cuf0
Unique Nametranscript:BL68756_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL68756_cuf0

>transcript:BL68756_cuf0-protein ID=transcript:BL68756_cuf0-protein|Name=transcript:BL68756_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=137bp
LSLVLLKICQREPKMCPVSTAYLPLLTALNSAINPITSIMRTPELRSGIW
QNLTAIPRVVITAFRGNSVNPQVEQPAVRNTENVQDAVDTASGSIQNTLE
EQPTGGDSKSLVNQGGAGPKKGISQRKVHDLAIVKID
Run BLAST on NCBI

mRNA from alignment at Sc0001387:6560..7204-

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL68756_cuf0 ID=transcript:BL68756_cuf0|Name=transcript:BL68756_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=645bp|location=Sequence derived from alignment at Sc0001387:6560..7204- (Branchiostoma lanceolatum)
CTTTCTCTTGTTCTCCTCAAAATATGCCAAAGGGAGCCAAAGATGTGTCC
TGTTTCAACTGCCTACTTGCCTTTGCTGACGGCTCTGAACTCAGCAATCA
ATCCAATCACAAGCATCATGCGTACACCAGAGTTAAGGAGTGGAATTTGG
CAAAACCTGACAGCGATTCCTAGGGTAGTTATCACCGCGTTCAGGGGGAA
CAGTGTAAACCCACAAGTTGAACAGCCTGCAGTGCGAAACACTGAAAACG
TGCAGGACGCTGTAGATACCGCAAGTGGAAGTATACAAAATACATTAGAA
GAACAGCCAACTGGAGGAGACAGCAAAAGTCTGGTCAATCAGGGAGGGGC
AGGGCCAAAGAAAGGCATTTCCCAGAGAAAGGTTCATGACCTTGCCATTG
TTAAAATTGACTAACCGATAAAGCAATCTACACAGCAAGGGAAAAGACAG
ACGTGAACTGCCGAAGAACAAAAGAGGCATGTACACCTCTCTAAATAACT
GTTCGTGTTCTGTAAACAAACTAGAACTCATGAGTAAGGGATAACCTAGG
TTCAATAGTAGACGTATTTTACTGCGACCGTGGCAGTTGTTTTTACCAGG
CTGTGTAGCAGTTTTGTAATGTCATAGATGTTCCATCTGATGTGT

Coding sequence (CDS) from alignment at Sc0001387:6560..7204-

>transcript:BL68756_cuf0 ID=transcript:BL68756_cuf0|Name=transcript:BL68756_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=414bp|location=Sequence derived from alignment at Sc0001387:6560..7204- (Branchiostoma lanceolatum)
CTTTCTCTTGTTCTCCTCAAAATATGCCAAAGGGAGCCAAAGATGTGTCC
TGTTTCAACTGCCTACTTGCCTTTGCTGACGGCTCTGAACTCAGCAATCA
ATCCAATCACAAGCATCATGCGTACACCAGAGTTAAGGAGTGGAATTTGG
CAAAACCTGACAGCGATTCCTAGGGTAGTTATCACCGCGTTCAGGGGGAA
CAGTGTAAACCCACAAGTTGAACAGCCTGCAGTGCGAAACACTGAAAACG
TGCAGGACGCTGTAGATACCGCAAGTGGAAGTATACAAAATACATTAGAA
GAACAGCCAACTGGAGGAGACAGCAAAAGTCTGGTCAATCAGGGAGGGGC
AGGGCCAAAGAAAGGCATTTCCCAGAGAAAGGTTCATGACCTTGCCATTG
TTAAAATTGACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL68756gene:BL68756Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL68756_cuf0-E1BL68756_cuf0-E1-1564476830-508344Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL68756_cuf0transcript:BL68756_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0001387genomeSc0001387:6560..7204 -
Properties
Property NameValue
Transcript idBL68756_cuf0
Biotypeprotein_coding