TCONS_00065511 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065511
Unique NameTCONS_00065511
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2154

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065511 ID=TCONS_00065511|Name=TCONS_00065511|organism=Clytia hemisphaerica|type=transcript|length=2154bp
AAAAGTTGGGAGAAATTTGATATTTGACACTTAAGATATTCTGTCTAGCG
AGTGGTTCATAGACAGTACAATGGCTTCAATTTGTCAACGTTGGTTTGCA
CTGGTTCTTTTGTTGATGACGGTGGCCCAAGCTAAGCAGACAATTTGTCA
AGGCAGCAACCACCTACAACAGAAATTTGCATATGAACCTACActttcat
ttccatcaaaaaatTATCCACATCTTGCCATCAGCTATGACACAACATCA
AAAGTATCCAAAATACTGGCGCCATCATCAAACTCGGCTTGGAAGATAGT
ACCAGGGCTTTGTGGCCAAGGGTTCAGTTTTGAATCAACAACACAACCTA
ATCATTTCTTAAGACATCGAAACTTTCTCTTGTTCGTGGATCCTTTTGAA
AATACCGCCCTCTACAAAAACGACGCTTGCTTCAAACCTGTTGCTGGTCT
TGCCGATTGCAATGAAGTCTCGTTTCAATCGATCAACTATCCAGACCGTT
TCTTGCGACATCAAGGCTATCGAATGAAACTCCATCCAAATGACGGCTCG
TCTCTGTTCAAGAATGATGCAACATTTAATATTCAGACAATTTGTCAAGG
CAGCAACATTCTACAACAGAAATTTGCATATGAACCTACActttcatttc
catcaaaaaatTATCCACATCTTGCCATCAGCTATGACACAACATCAAAA
GTATCCAAAATACTGGCGCCATCATCAAACTCGGCTTGGAAGATAGTACC
AGGGCTTTGTGGCCAAGGGTTCAGCTTTGAATCAACAACACAACCTAACC
ATTTCTTGAGACATAGAAACTTTCTCTTGTTCGTGGATCCCTTTGAAAAT
ATCGCCCTCTACAAGAATGACGCTTGCTTCAAACCCGTCGCTGGTCTTGC
CGATTGCAATGAAGTCTCGTTTCAATCGATCAACTATCCAGACCGTTTCT
TACGACATCAAGGCTATCAAATGAAACTCCATCAAAATGACGGCTCTTCT
TTGTTCAAGAATGATGCAACATTTAATATTCAGACAATTTGTCAAGGCAG
CGACCACCTACAACAGAAATTTGCATATGAACCTACActttcatttccat
caaaaaatTATCCAAATCTTGCCATCAGCTATGACACAACATCAAAAGTA
TCCAAAATACTGGCACCATCATCAAACTCGGCTTGGAAGATAGTGCCAGG
GCTTTGCGGCCAAGGGTTCAGCTTTGAATCAACAACTCAACCTAACCATT
TCTTGAGACATCGACACCTTCTCTTGTTCGTGGATCCCTTTGAAAATACC
GCCCTTTACAAGAATGACGCTTGCTTCAAACCCGTCGCTGGTCTTGCCGA
TTGCAATGAAGTCTCGTTTCAATCCATCAACTATCCAGACCGTTTCTTGC
GACATCAAGGCTATCGAATGAAACTCCATCAAAATGACGGCTCGTCTCTG
TTCAAGAATGATGCAACGTTtaatatttgaatttcaaattctttggGATA
AAGACTCTTCTgtaactttttggacctaccccggtggaggtcctataaat
taaccgttgtatgttcgtccgttcgttagttaccagcttttctcgagatt
ggctcattagttttttctgattttttgcacaaagatgcataactataaac
cctcgaatgtgacggagcctgattttcgagaaaaaaattttttaggcaaa
tttgggccaaaaaattgctaaaaaacggtttttttggactttgtgaaaaa
ttggattattaattttttctcattttttctatgaaagtagggtaccatca
taggtaaaagatgggttaagcagatttttgctaaaaaaattttttggctc
aaaaaatgcatgtttatctataagaatcactattaataagcatacatgtt
cttagtcaaattactcaattatttttatgagatagatgtattttttgctc
atgagggcttacttttgaagaatatgtgtgtttagacatgaaatttagGC
TGCTTggtgtgtttttatagaaaaactggcctaattcgatatttttttat
aagcaggttatcaattacttaggtattagcttttctcgaggttggcgctt
tcattctttatgattttttgcacaaagatgcatagctataaaccctcgaa
tgtt
Run BLAST on NCBI

protein sequence of TCONS_00065511-protein

>TCONS_00065511-protein ID=TCONS_00065511-protein|Name=TCONS_00065511-protein|organism=Clytia hemisphaerica|type=polypeptide|length=469bp
MASICQRWFALVLLLMTVAQAKQTICQGSNHLQQKFAYEPTLSFPSKNYP
HLAISYDTTSKVSKILAPSSNSAWKIVPGLCGQGFSFESTTQPNHFLRHR
NFLLFVDPFENTALYKNDACFKPVAGLADCNEVSFQSINYPDRFLRHQGY
RMKLHPNDGSSLFKNDATFNIQTICQGSNILQQKFAYEPTLSFPSKNYPH
LAISYDTTSKVSKILAPSSNSAWKIVPGLCGQGFSFESTTQPNHFLRHRN
FLLFVDPFENIALYKNDACFKPVAGLADCNEVSFQSINYPDRFLRHQGYQ
MKLHQNDGSSLFKNDATFNIQTICQGSDHLQQKFAYEPTLSFPSKNYPNL
AISYDTTSKVSKILAPSSNSAWKIVPGLCGQGFSFESTTQPNHFLRHRHL
LLFVDPFENTALYKNDACFKPVAGLADCNEVSFQSINYPDRFLRHQGYRM
KLHQNDGSSLFKNDATFNI
Run BLAST on NCBI

transcript from alignment at scaffold_44:201701..205094-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065511 ID=TCONS_00065511|Name=TCONS_00065511|organism=Clytia hemisphaerica|type=transcript|length=3394bp|location=Sequence derived from alignment at scaffold_44:201701..205094- (Clytia hemisphaerica)
AAAAGTTGGGAGAAATTTGATATTTGACACTTAAGATATTCTGTCTAGCG AGTGGTTCATAGACAGTACAATGGCTTCAATTTGTCAACGTTGGTTTGCA CTGGTTCTTTTGTTGATGACGGTGGCCCAAGCTAAGCGTAAGTCAGATTT TATTCAGTTTCAAAAATTCATCACCCCTTTGCATTAACACGTAATCGCCA ATAAACTTTTTAGCTTATTTTGAGTTGTCTTGTCACATCCCTTACTGTGC AGTGGCCACAAACATATCATGCCATTTATTGAGGTATAAATATTATGCTT TTTTCATACAATAATTCAGAATTCGTTTAAACCATGATTCAAATCATATT TTAGAGACAATTTGTCAAGGCAGCAACCACCTACAACAGAAATTTGCATA TGAACCTACACTTTCATTTCCATCAAAAAATTATCCACATCTTGCCATCA GCTATGACACAACATCAAAAGTATCCAAAATACTGGCGCCATCATCAAAC TCGGCTTGGAAGATAGTACCAGGGCTTTGTGGCCAAGGGTTCAGTTTTGA ATCAACAACACAACCTAATCATTTCTTAAGACATCGAAACTTTCTCTTGT TCGTGGATCCTTTTGAAAATACCGCCCTCTACAAAAACGACGCTTGCTTC AAACCTGTTGCTGGTCTTGCCGATTGCAATGAAGTCTCGTTTCAATCGAT CAACTATCCAGACCGTTTCTTGCGACATCAAGGCTATCGAATGAAACTCC ATCCAAATGACGGCTCGTCTCTGTTCAAGAATGATGCAACATTTAATATT CGTAAGATTTAAAATATTATTGCAATTTCATCACTGTGTTTCTTATTAGA GCCCAAATCAGTCGGAAAAACATAATTCCAGGAATGAGTTAATAAGTTCT TTTTTTGCAATATCAATGCATTATCATTTAAAATTTGCTCATATAATAAT TCAAATCTTATTTCAGAGACAATTTGTCAAGGCAGCAACATTCTACAACA GAAATTTGCATATGAACCTACACTTTCATTTCCATCAAAAAATTATCCAC ATCTTGCCATCAGCTATGACACAACATCAAAAGTATCCAAAATACTGGCG CCATCATCAAACTCGGCTTGGAAGATAGTACCAGGGCTTTGTGGCCAAGG GTTCAGCTTTGAATCAACAACACAACCTAACCATTTCTTGAGACATAGAA ACTTTCTCTTGTTCGTGGATCCCTTTGAAAATATCGCCCTCTACAAGAAT GACGCTTGCTTCAAACCCGTCGCTGGTCTTGCCGATTGCAATGAAGTCTC GTTTCAATCGATCAACTATCCAGACCGTTTCTTACGACATCAAGGCTATC AAATGAAACTCCATCAAAATGACGGCTCTTCTTTGTTCAAGAATGATGCA ACATTTAATATTCGTAAGATTTGAAATATTATTGCAGTTTCATCTTCATT ATACACTTGCGGGCTGCTGAACTTACCAATGGTTCGGAATCGAGGGACTA ATTCGCTAATACAGTGGACCTTTTTAATTCGAACTTCTTCTCAGGTCCCG TCGCAAGGACAAACCTTCGTAAAATACTCTACCTATTATTGGAATCTCTC CGCAATTCGAACAGATTGGACTTTCTTCTCAAACTCGAGTTATTGAGAGT CCCTCAAGAGTTAACAATATTAACATAGTTATCCTGTATACCTCGACTGA ATGAACATATATTTATCAACCAGGGTTCGGTAGTTTCGTAACCCCTGCCC ATGTAAAGCAATTCAATCAGAAAACTAAAAGTTTGAAGCCCTTAGGGCCC TTGGCATTTACACGCGAGCAGGTTTTACCACCAATCAAGTTAGCTTATAT TTGTCAGGGCTAGCACGTTTATAGCCGAGCTCTTTTCAACAATTGAAAAT TTGATCCCGTTGAATCTCATCGAATATTTGACTAAGTGGGCGGCATTTTC AATTTTGCTTCAAATGCTCTAAAATTTTATACCAATGACGCAAGATTTTA TGTAGTCTCCAAAATAAATACAATAAAAAAGTTTCTGTATCAAAGGTCAT GGCCCTTAGAAGCCGGTATTTCAACCCCTCCACAAGTTTACTCGTATAGT CGGCAGAGAACATGTTAGCGAGGCCTCGTGAAAAATATTTATGACCTGCT TTCCATCATTAGACATGACTTGGAGTCGATTTGAACAGTTTGGGGGTTTT TGAAATGTTTTTGGAGCCCTTTTAAAAGACAGGTTATGTGTATTGTAATT CATATTCAAATCATATTTTAGAGACAATTTGTCAAGGCAGCGACCACCTA CAACAGAAATTTGCATATGAACCTACACTTTCATTTCCATCAAAAAATTA TCCAAATCTTGCCATCAGCTATGACACAACATCAAAAGTATCCAAAATAC TGGCACCATCATCAAACTCGGCTTGGAAGATAGTGCCAGGGCTTTGCGGC CAAGGGTTCAGCTTTGAATCAACAACTCAACCTAACCATTTCTTGAGACA TCGACACCTTCTCTTGTTCGTGGATCCCTTTGAAAATACCGCCCTTTACA AGAATGACGCTTGCTTCAAACCCGTCGCTGGTCTTGCCGATTGCAATGAA GTCTCGTTTCAATCCATCAACTATCCAGACCGTTTCTTGCGACATCAAGG CTATCGAATGAAACTCCATCAAAATGACGGCTCGTCTCTGTTCAAGAATG ATGCAACGTTTAATATTTGAATTTCAAATTCTTTGGGATAAAGACTCTTC TGTAACTTTTTGGACCTACCCCGGTGGAGGTCCTATAAATTAACCGTTGT ATGTTCGTCCGTTCGTTAGTTACCAGCTTTTCTCGAGATTGGCTCATTAG TTTTTTCTGATTTTTTGCACAAAGATGCATAACTATAAACCCTCGAATGT GACGGAGCCTGATTTTCGAGAAAAAAATTTTTTAGGCAAATTTGGGCCAA AAAATTGCTAAAAAACGGTTTTTTTGGACTTTGTGAAAAATTGGATTATT AATTTTTTCTCATTTTTTCTATGAAAGTAGGGTACCATCATAGGTAAAAG ATGGGTTAAGCAGATTTTTGCTAAAAAAATTTTTTGGCTCAAAAAATGCA TGTTTATCTATAAGAATCACTATTAATAAGCATACATGTTCTTAGTCAAA TTACTCAATTATTTTTATGAGATAGATGTATTTTTTGCTCATGAGGGCTT ACTTTTGAAGAATATGTGTGTTTAGACATGAAATTTAGGCTGCTTGGTGT GTTTTTATAGAAAAACTGGCCTAATTCGATATTTTTTTATAAGCAGGTTA TCAATTACTTAGGTATTAGCTTTTCTCGAGGTTGGCGCTTTCATTCTTTA TGATTTTTTGCACAAAGATGCATAGCTATAAACCCTCGAATGTT

Coding sequence (CDS) from alignment at scaffold_44:201701..205094-

>TCONS_00065511 ID=TCONS_00065511|Name=TCONS_00065511|organism=Clytia hemisphaerica|type=CDS|length=5640bp|location=Sequence derived from alignment at scaffold_44:201701..205094- (Clytia hemisphaerica)
AGACAATTTGTCAAGGCAGCGACCACCTACAACAGAAATTTGCATATGAA
CCTACACTTTCATTTCCATCAAAAAATTATCCAAATCTTGCCATCAGCTA
TGACACAACATCAAAAGTATCCAAAATACTGGCACCATCATCAAACTCGG
CTTGGAAGATAGTGCCAGGGCTTTGCGGCCAAGGGTTCAGCTTTGAATCA
ACAACTCAACCTAACCATTTCTTGAGACATCGACACCTTCTCTTGTTCGT
GGATCCCTTTGAAAATACCGCCCTTTACAAGAATGACGCTTGCTTCAAAC
CCGTCGCTGGTCTTGCCGATTGCAATGAAGTCTCGTTTCAATCCATCAAC
TATCCAGACCGTTTCTTGCGACATCAAGGCTATCGAATGAAACTCCATCA
AAATGACGGCTCGTCTCTGTTCAAGAATGATGCAACGTTTAATATTTGAA
GACAATTTGTCAAGGCAGCAACATTCTACAACAGAAATTTGCATATGAAC
CTACACTTTCATTTCCATCAAAAAATTATCCACATCTTGCCATCAGCTAT
GACACAACATCAAAAGTATCCAAAATACTGGCGCCATCATCAAACTCGGC
TTGGAAGATAGTACCAGGGCTTTGTGGCCAAGGGTTCAGCTTTGAATCAA
CAACACAACCTAACCATTTCTTGAGACATAGAAACTTTCTCTTGTTCGTG
GATCCCTTTGAAAATATCGCCCTCTACAAGAATGACGCTTGCTTCAAACC
CGTCGCTGGTCTTGCCGATTGCAATGAAGTCTCGTTTCAATCGATCAACT
ATCCAGACCGTTTCTTACGACATCAAGGCTATCAAATGAAACTCCATCAA
AATGACGGCTCTTCTTTGTTCAAGAATGATGCAACATTTAATATTCAGAC
AATTTGTCAAGGCAGCAACCACCTACAACAGAAATTTGCATATGAACCTA
CACTTTCATTTCCATCAAAAAATTATCCACATCTTGCCATCAGCTATGAC
ACAACATCAAAAGTATCCAAAATACTGGCGCCATCATCAAACTCGGCTTG
GAAGATAGTACCAGGGCTTTGTGGCCAAGGGTTCAGTTTTGAATCAACAA
CACAACCTAATCATTTCTTAAGACATCGAAACTTTCTCTTGTTCGTGGAT
CCTTTTGAAAATACCGCCCTCTACAAAAACGACGCTTGCTTCAAACCTGT
TGCTGGTCTTGCCGATTGCAATGAAGTCTCGTTTCAATCGATCAACTATC
CAGACCGTTTCTTGCGACATCAAGGCTATCGAATGAAACTCCATCCAAAT
GACGGCTCGTCTCTGTTCAAGAATGATGCAACATTTAATATTCATGGCTT
CAATTTGTCAACGTTGGTTTGCACTGGTTCTTTTGTTGATGACGGTGGCC
CAAGCTAAGCAGACAATTTGTCAAGGCAGCGACCACCTACAACAGAAATT
TGCATATGAACCTACACTTTCATTTCCATCAAAAAATTATCCAAATCTTG
CCATCAGCTATGACACAACATCAAAAGTATCCAAAATACTGGCACCATCA
TCAAACTCGGCTTGGAAGATAGTGCCAGGGCTTTGCGGCCAAGGGTTCAG
CTTTGAATCAACAACTCAACCTAACCATTTCTTGAGACATCGACACCTTC
TCTTGTTCGTGGATCCCTTTGAAAATACCGCCCTTTACAAGAATGACGCT
TGCTTCAAACCCGTCGCTGGTCTTGCCGATTGCAATGAAGTCTCGTTTCA
ATCCATCAACTATCCAGACCGTTTCTTGCGACATCAAGGCTATCGAATGA
AACTCCATCAAAATGACGGCTCGTCTCTGTTCAAGAATGATGCAACGTTT
AATATTTGAAGACAATTTGTCAAGGCAGCAACATTCTACAACAGAAATTT
GCATATGAACCTACACTTTCATTTCCATCAAAAAATTATCCACATCTTGC
CATCAGCTATGACACAACATCAAAAGTATCCAAAATACTGGCGCCATCAT
CAAACTCGGCTTGGAAGATAGTACCAGGGCTTTGTGGCCAAGGGTTCAGC
TTTGAATCAACAACACAACCTAACCATTTCTTGAGACATAGAAACTTTCT
CTTGTTCGTGGATCCCTTTGAAAATATCGCCCTCTACAAGAATGACGCTT
GCTTCAAACCCGTCGCTGGTCTTGCCGATTGCAATGAAGTCTCGTTTCAA
TCGATCAACTATCCAGACCGTTTCTTACGACATCAAGGCTATCAAATGAA
ACTCCATCAAAATGACGGCTCTTCTTTGTTCAAGAATGATGCAACATTTA
ATATTCAGACAATTTGTCAAGGCAGCAACCACCTACAACAGAAATTTGCA
TATGAACCTACACTTTCATTTCCATCAAAAAATTATCCACATCTTGCCAT
CAGCTATGACACAACATCAAAAGTATCCAAAATACTGGCGCCATCATCAA
ACTCGGCTTGGAAGATAGTACCAGGGCTTTGTGGCCAAGGGTTCAGTTTT
GAATCAACAACACAACCTAATCATTTCTTAAGACATCGAAACTTTCTCTT
GTTCGTGGATCCTTTTGAAAATACCGCCCTCTACAAAAACGACGCTTGCT
TCAAACCTGTTGCTGGTCTTGCCGATTGCAATGAAGTCTCGTTTCAATCG
ATCAACTATCCAGACCGTTTCTTGCGACATCAAGGCTATCGAATGAAACT
CCATCCAAATGACGGCTCGTCTCTGTTCAAGAATGATGCAACATTTAATA
TTCATGGCTTCAATTTGTCAACGTTGGTTTGCACTGGTTCTTTTGTTGAT
GACGGTGGCCCAAGCTAAGCAGACAATTTGTCAAGGCAGCGACCACCTAC
AACAGAAATTTGCATATGAACCTACACTTTCATTTCCATCAAAAAATTAT
CCAAATCTTGCCATCAGCTATGACACAACATCAAAAGTATCCAAAATACT
GGCACCATCATCAAACTCGGCTTGGAAGATAGTGCCAGGGCTTTGCGGCC
AAGGGTTCAGCTTTGAATCAACAACTCAACCTAACCATTTCTTGAGACAT
CGACACCTTCTCTTGTTCGTGGATCCCTTTGAAAATACCGCCCTTTACAA
GAATGACGCTTGCTTCAAACCCGTCGCTGGTCTTGCCGATTGCAATGAAG
TCTCGTTTCAATCCATCAACTATCCAGACCGTTTCTTGCGACATCAAGGC
TATCGAATGAAACTCCATCAAAATGACGGCTCGTCTCTGTTCAAGAATGA
TGCAACGTTTAATATTTGAAGACAATTTGTCAAGGCAGCAACATTCTACA
ACAGAAATTTGCATATGAACCTACACTTTCATTTCCATCAAAAAATTATC
CACATCTTGCCATCAGCTATGACACAACATCAAAAGTATCCAAAATACTG
GCGCCATCATCAAACTCGGCTTGGAAGATAGTACCAGGGCTTTGTGGCCA
AGGGTTCAGCTTTGAATCAACAACACAACCTAACCATTTCTTGAGACATA
GAAACTTTCTCTTGTTCGTGGATCCCTTTGAAAATATCGCCCTCTACAAG
AATGACGCTTGCTTCAAACCCGTCGCTGGTCTTGCCGATTGCAATGAAGT
CTCGTTTCAATCGATCAACTATCCAGACCGTTTCTTACGACATCAAGGCT
ATCAAATGAAACTCCATCAAAATGACGGCTCTTCTTTGTTCAAGAATGAT
GCAACATTTAATATTCAGACAATTTGTCAAGGCAGCAACCACCTACAACA
GAAATTTGCATATGAACCTACACTTTCATTTCCATCAAAAAATTATCCAC
ATCTTGCCATCAGCTATGACACAACATCAAAAGTATCCAAAATACTGGCG
CCATCATCAAACTCGGCTTGGAAGATAGTACCAGGGCTTTGTGGCCAAGG
GTTCAGTTTTGAATCAACAACACAACCTAATCATTTCTTAAGACATCGAA
ACTTTCTCTTGTTCGTGGATCCTTTTGAAAATACCGCCCTCTACAAAAAC
GACGCTTGCTTCAAACCTGTTGCTGGTCTTGCCGATTGCAATGAAGTCTC
GTTTCAATCGATCAACTATCCAGACCGTTTCTTGCGACATCAAGGCTATC
GAATGAAACTCCATCCAAATGACGGCTCGTCTCTGTTCAAGAATGATGCA
ACATTTAATATTCATGGCTTCAATTTGTCAACGTTGGTTTGCACTGGTTC
TTTTGTTGATGACGGTGGCCCAAGCTAAGCAGACAATTTGTCAAGGCAGC
GACCACCTACAACAGAAATTTGCATATGAACCTACACTTTCATTTCCATC
AAAAAATTATCCAAATCTTGCCATCAGCTATGACACAACATCAAAAGTAT
CCAAAATACTGGCACCATCATCAAACTCGGCTTGGAAGATAGTGCCAGGG
CTTTGCGGCCAAGGGTTCAGCTTTGAATCAACAACTCAACCTAACCATTT
CTTGAGACATCGACACCTTCTCTTGTTCGTGGATCCCTTTGAAAATACCG
CCCTTTACAAGAATGACGCTTGCTTCAAACCCGTCGCTGGTCTTGCCGAT
TGCAATGAAGTCTCGTTTCAATCCATCAACTATCCAGACCGTTTCTTGCG
ACATCAAGGCTATCGAATGAAACTCCATCAAAATGACGGCTCGTCTCTGT
TCAAGAATGATGCAACGTTTAATATTTGAAGACAATTTGTCAAGGCAGCA
ACATTCTACAACAGAAATTTGCATATGAACCTACACTTTCATTTCCATCA
AAAAATTATCCACATCTTGCCATCAGCTATGACACAACATCAAAAGTATC
CAAAATACTGGCGCCATCATCAAACTCGGCTTGGAAGATAGTACCAGGGC
TTTGTGGCCAAGGGTTCAGCTTTGAATCAACAACACAACCTAACCATTTC
TTGAGACATAGAAACTTTCTCTTGTTCGTGGATCCCTTTGAAAATATCGC
CCTCTACAAGAATGACGCTTGCTTCAAACCCGTCGCTGGTCTTGCCGATT
GCAATGAAGTCTCGTTTCAATCGATCAACTATCCAGACCGTTTCTTACGA
CATCAAGGCTATCAAATGAAACTCCATCAAAATGACGGCTCTTCTTTGTT
CAAGAATGATGCAACATTTAATATTCAGACAATTTGTCAAGGCAGCAACC
ACCTACAACAGAAATTTGCATATGAACCTACACTTTCATTTCCATCAAAA
AATTATCCACATCTTGCCATCAGCTATGACACAACATCAAAAGTATCCAA
AATACTGGCGCCATCATCAAACTCGGCTTGGAAGATAGTACCAGGGCTTT
GTGGCCAAGGGTTCAGTTTTGAATCAACAACACAACCTAATCATTTCTTA
AGACATCGAAACTTTCTCTTGTTCGTGGATCCTTTTGAAAATACCGCCCT
CTACAAAAACGACGCTTGCTTCAAACCTGTTGCTGGTCTTGCCGATTGCA
ATGAAGTCTCGTTTCAATCGATCAACTATCCAGACCGTTTCTTGCGACAT
CAAGGCTATCGAATGAAACTCCATCCAAATGACGGCTCGTCTCTGTTCAA
GAATGATGCAACATTTAATATTCATGGCTTCAATTTGTCAACGTTGGTTT
GCACTGGTTCTTTTGTTGATGACGGTGGCCCAAGCTAAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_041055XLOC_041055Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065511-exon-scaffold_44-1575043694:204958..205094TCONS_00065511-exon-scaffold_44-1575043694:204958..205094Clytia hemisphaericaexon
TCONS_00065511-exon-scaffold_44-1575043694:204294..204740TCONS_00065511-exon-scaffold_44-1575043694:204294..204740Clytia hemisphaericaexon
TCONS_00065511-exon-scaffold_44-1575043694:203682..204128TCONS_00065511-exon-scaffold_44-1575043694:203682..204128Clytia hemisphaericaexon
TCONS_00065511-exon-scaffold_44-1575043694:201701..202823TCONS_00065511-exon-scaffold_44-1575043694:201701..202823Clytia hemisphaericaexon
TCONS_00065511-exon-scaffold_44-1510915933:204958..205094TCONS_00065511-exon-scaffold_44-1510915933:204958..205094Clytia hemisphaericaexon
TCONS_00065511-exon-scaffold_44-1510915933:204294..204740TCONS_00065511-exon-scaffold_44-1510915933:204294..204740Clytia hemisphaericaexon
TCONS_00065511-exon-scaffold_44-1510915933:203682..204128TCONS_00065511-exon-scaffold_44-1510915933:203682..204128Clytia hemisphaericaexon
TCONS_00065511-exon-scaffold_44-1510915933:201701..202823TCONS_00065511-exon-scaffold_44-1510915933:201701..202823Clytia hemisphaericaexon
TCONS_00065511-exon-scaffold_44-1491911889:204958..205094TCONS_00065511-exon-scaffold_44-1491911889:204958..205094Clytia hemisphaericaexon
TCONS_00065511-exon-scaffold_44-1491911889:204294..204740TCONS_00065511-exon-scaffold_44-1491911889:204294..204740Clytia hemisphaericaexon
TCONS_00065511-exon-scaffold_44-1491911889:203682..204128TCONS_00065511-exon-scaffold_44-1491911889:203682..204128Clytia hemisphaericaexon
TCONS_00065511-exon-scaffold_44-1491911889:201701..202823TCONS_00065511-exon-scaffold_44-1491911889:201701..202823Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065511-proteinTCONS_00065511-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_44supercontigscaffold_44:201701..205094 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0 0 0 0 0 0 3.62417 3.38305 0.812998 2.00001 0.224587 2.02156 0.545358 0.796413 0 0 0 0 0.00247194 0.855821 0 0 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR007934AbfB_ABD
Vocabulary: Biological Process
TermDefinition
GO:0046373L-arabinose metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0046556alpha-L-arabinofuranosidase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046373 L-arabinose metabolic process
molecular_function GO:0046556 alpha-L-arabinofuranosidase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065511 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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