TCONS_00006857 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006857
Unique NameTCONS_00006857
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length367

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006857 ID=TCONS_00006857|Name=TCONS_00006857|organism=Clytia hemisphaerica|type=transcript|length=367bp
GTAAGATGTTGAAATTTCTCGCTACATTTTTGGTGGTTGGTTTAAATATG
ATCAACGTATTTGGTCAGTACCATTCAATACAATGCGAGTTTAACAAGTT
GACCATTATCATTCCCAAAGAGGAGTCCACAATCTTTcctgaaaatgata
tttctcAATACAATATCTCATGGAATGATCCTACTTGTGGGCCGAgtgaa
aaatccaatgaaacgcATTTGATCATGGTGGCTGATTATTCGTCTTGTGG
CACTGAAGCTGTGGACGATGAAAATGAAATCATCTTTAAAAATACGGTTC
ACATAGCAAAGCCTTCAACTTTATCATACACGAATCCAGGGCTAGAAACT
GTTGGCACCTTTGCAAC
Run BLAST on NCBI

transcript from alignment at sc0000072:138652..156528+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006857 ID=TCONS_00006857|Name=TCONS_00006857|organism=Clytia hemisphaerica|type=transcript|length=17877bp|location=Sequence derived from alignment at sc0000072:138652..156528+ (Clytia hemisphaerica)
GTAAGATGTTGAAATTTCTCGCTACATTTTTGGTGGTTGGTTTAAATATG
ATCAACGTATTTGGTAAGTATTACGTATAGATCTTCGTTAATTTTAtaat
tacatccctgtctcacaaccccagTACCCCGgttgaacttttttcttcag
tgaggataaaaatcccaatgggaatggaaattttattgttccaagtttAA
TAAATTCAGTGGAGATAGTTTTAGAGTGAAATGtttagacattgattttc
gagtggggatgatatcaaagtcgatttcccagtggggctgaaattccaga
gtattttcccactggggaccaaatttttgccaagttttccagtggggatg
gggtcctagtgggtctgtgatacaggggtgtataattTCTCGAATCTTTC
TGTAGATTCGGAGTAAAAAAACATACCTAGAGCTTGATCACTTTttgaat
tggaaattttttatGTTCTGCAGAAAGTGTTGATTGTagtgttatatttt
tttaatattgaagattaaagatgttttggaattttttaccggatttttga
caatttttacattttttgagaGTTTTAAAAAGTTTAGGGTTTTATTTTGG
AGTTTTGGAGTCTCatgttttttttgtgatttttttaggatttttggtat
ttttttggtattatttctttacattatgtaatagaaatattttcatattt
tgttggGGAAATTTGAGATATTTCCGAGATTCTGAAATTAATTTGTAATT
TATTCCTTTGTTTAAACAGTTTTGAGTGATTTGGGAAATAGGGCAtctaa
aatgtaaataaaaggCATTAAAAGAGGAAAgatctattttcaaaagatta
atTCCATTTCTAGACCTTTTTGTAAACACGATACCATTGTGACTTAAAGT
GGCGAAAATATTACGCAATGACAAATATATCCAATAAATCAAGTATAGCG
TCTCGATACTTCTTTAGGCGAACGCAACAGtctatacacctttttgaccg
tagccgccaattgccgcgtggacatttttgtccgttttaccagcCTAAAA
CCGtctcagtctttttttcgcacctatagacaatagaaaaaagtgtaaaa
aaaggattggataaAGTTCAGGGGGATAATCAAATGATAAAGTAGCGCGC
GTCTGACTGCGCGACTATGGctgaaaaggtgtattgcatAAATAATTACT
CCACACTTCAGTGGATGCAAGTAAAACAAGCAGGAAATTGAATATTATCT
ATAAATAAGTTTGTTCAAATTGGCACACTAACATTCTCCCGAATTACAAC
GCAATTACGTTGGAATCATCCCACGCGAAGTCCTATAAAATATTAGCTCG
AGTATTAGGGTTTTATTTCCGTAATACGGAGCTGCTGGAGAAATTTGATA
TGCTTTGGTCAATAGGTCGTCGCgttctcccaaacaactattGCTTAGTG
CTTTATTTTTTGCCTTTATTGGTGACTTATGTAACGTTTTGCCGCTAATT
CAAAATGAGAGCTTAATCCAAAACCTCTTTAACATATAGAATATTATCAT
TTTTAGGTCAGTACCATTCAATACAATGCGAGTTTAACAAGTTGACCATT
ATCATTCCCAAAGAGGAGTCCACAATCTTTcctgaaaatgatatttctcA
ATACAATATCTCATGGAATGATCCTACTTGTGGGCCGAgtgaaaaatcca
atgaaacgcATTTGATCATGGTGGCTGATTATTCGTCTTGTGGCACTGAA
GCTGTGGACGATGAAAATGAAATCATCTTTAAAAATACGGTATGTACTTC
TACAcgcttattttataagaacaagtaaattttggctcaagctaggctgt
tcttaattttttgaaattttcaggctttaatgctcttatgatgttcttag
tacgtttagtttttttacttaaaactgaagatgggtttaaaatctgttaa
aatcagcacttttttaataatttcggaaatctgaggctcagattgttctt
aatttgttctaaggttttgactaattttcagcctcgtgttttttataaaa
ttgttcttataaggaAATGCGAGTATGGGAGCAATGaatcaatgtaaaaa
atttctGGAAGAGCCGTATTCGAagcaaattaattttcaaagtgaagaag
ATAGGATATAATAGTTTTTATTGCATCAAATTTTGTCGAAACAAGTTCTG
CTCACCTTTTTTCGGACATACTGTAGGATGGCTACACTTTCTCATTCCCA
GGGTCACTTTACAGCCGAAAAAAAACATAGTGTACAAAAGTAGCAATTTT
TTAAGCGGTCACTCTCGAGGCCGTTTTGTGTTGTCCCGGaaggggggtac
ttaggcagaattaggtacggggacgtgccgctgatCAGGGTCTCTTTTTT
CAGAGTCTagagatatctgacagggtcccaaatttaccaaacattcgtAT
CTGAccgggtccatttttcaaactccaacggcacgtcggtcgtcaaggtc
agtgccgtATTTGCCGATGTCCGTggaaaaaacagcagaaaaattTGCCA
TGAAACGTTTCCCAAGGATAAAAAAGTCATCTAGCAGTACATTTACGTTT
CAAGCGAACGTACAAAAAATTCTTCCTTTATCAGGTCCACATAGCAAAGC
CTTCAACTTTATCATACACGAATCCAGGGCTAGAAACTGTTGGCACCTTT
GCAACATATAAAGTAATATGTATACTTCCAAAGATTACTCTGAATGTCAC
GTGGGCGTATGCAATCAATGTCATTGGTCAAGAGTCCTTTCAGATGGTCG
CTTCAGAGACAAGTAAGTGTGCTGTCCCGGACACTGAGCTCGATTACCGT
GCCTGAAAACTGCTATGCGAGACCGGGACTCCTAGCACCAGAGGGTAGAA
TattagatttataaagcccgaagggctagatgtcgtgcttttgcTGGAAA
GTATGCCGTGGTTAGGGAGGGAGGAAATCTTACCTAGGTTACATgacatt
acaataaaatttcagcgcttgacaaATAAGAAGCtttgcgggttttcgaa
aacaatggcagcaatatttttgcgatattcacttttttttgcttggaaga
ccTTAAAGCACGATATCTGGCCCTTCAGGCTTTACAAAAATCTGTGGTTA
GAATCCATCATTTTGACCACGTTCGAAAGATGACgatgatggtgatgatg
atgGGCGGAAGAGTGTTTCTCCTATAATTTTTGGTATCTTAAAGTTTGCT
CAAATAAACCCTGTCTCGCAGCTCCGTTGGAGCTTCTTCCCACAGTTGAA
TTTTTTATGGAGATCTCaacggggatagaaattttattgttcccaGGTGG
GAATGGTTTTTGAGTTCAATTTCTTGCCGATTTTGAATTGGGATGAAAAC
AAATCAATTTTCTAGGGGGGGGGAGGGCTGAAACTGCAGGGTATCTTTCC
CaccaggaaagaaattttgaccTAATCTTCAAGTGGGTAGGGGGTCCTCC
CCTGGTCTCTGATGCAGGGGTGTCAAAGTCCATCGTTTCCAAAAGAATCT
ACATCATATTTTACCAGAATTTAACCAGAGTTTTTTACAGTAAATAACTt
attttttggttaaaattattcCCTTCTTTGAAAATCAATAATCCTTTAAA
TCCCTTAAACAGTATTTTTCTATTCCCAGCTTCAAGCGGCAAGTTCACTG
TTTCAATAAACCTCTATAAATCATCCGAATTCAATCAAAAGTTTACGTAC
CCGGCTGTTCTGGATATGATCGATCGTTTCAATTTGGAAATCGAGCTTGA
AAGTGCTGCGGATTTATTTGTAGTTCCACAAAGTTGTTACGTGACACCTG
GTGCTGATCGTACTAaccttatcagggaaaataTTTTCACAGAAAGGTAT
ATCTACCTGATCGGCTCTTTTTATACCAGTCCTCATTTAGCTCCAGCTCC
AGCTCCAGCTTGAATTTTCCATCTTAGCCCGGCTCTTTTAATTTTGATCc
cttacaccggcccttattacgcctgCGACGAAAAAAATAGCGATCATGTa
tgtgtaaaaagggccgataaggtagttgcTACATCTGTTCAATAATGAGC
AGGACCATTAGTTACGGcattattaattatttttctttgaatctTTTTCA
GGTGCCATAATAATCATCATCACAGATTCAGATTACAACCGTCAGCTCAA
AACACCAAGAAATTCCGATTTTCATTAAATGCTTTCCGATTCAAAAACTC
GAATGGTATGGTCTACATTCATTGTTCAACACACATTTGTTTGAAAGGTA
GTAACGATACAAAATGCGAATTTGGATGTAGACGGAAAAGACGATCTGAA
GATTCAAAGTTTGTTGATGTTTTGagtaaagattacgtcattcGAACTGG
ATTGATTATCGTTACATCATCATCGTTGTCAAACAATGAaggtaaaaata
ttaaaaaataaatataaatattgtaGTATAGTCCCAAGTTTTAACGAAAA
TGCACAGTAATTCATTACCTCAAATCATGGATGAGCCAATTGGAGCCCAC
AAACTGCGCATGCGTTCTTTTAAACCGTTAGTGGTTAAATAGCGTAAAGA
GTTAAGGGAAATGAATCGCTAGgcgtggtacagtcactttcagtcggggt
tgtggatggtaAATTATGTCGTTCTTTATTgtcgttttttcgtttttagt
cGTTTTTTGTCGTTTATATTCATTTCTCGTTTTTTCTTCGTTCTTTCATA
GTCTCTTTATGGTGGTCTCGTTTTAGCACTTCCACACCCTCATAAATTAA
AAGGAAAGTTGGTTCTTCACTGCTTCCCTTCAAGCTGACTCCTTTCTTCG
AAGGTTTGATAAGAAAGTGACGTATCAGTTCGTTCTCTAAATTGATTTTC
GCTAAAAGAGAGAATATTGgaagttttctttaaagaatataGGAAAGGTT
GGGATAATAATTTGGgttgggataaatttgaaaagagAGGTAAGCCTGAA
GGTAAGTAAGCAGTGACAAAGTTGTTAACTGTGTTTACCGTTTTTTTCGT
AACTCTACCGCTGCTATTTTTCCGTAGCCGCAAATAGCGGCGTGAAACTT
CGCGTTTACATTTTCCTGCGTTTACCtccatttaagggctctgaccatag
tcagaaaattgattttagtatctgaaacataaaagttatgttttagattc
tttaacacttttaacaaagaattgcctttataNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNtccagatgaaaaattgatgaaaaaccactattttgaagatt
tcgagacaaagaagcatttacaaaaattttccgcaaaattttttattgtt
tggtaaaagatacaccatttaCTGCGNNNatgtataacatgccatagttt
tgttggttacatcagtcagaaaacacattttaaacacggcaattatgaaa
aattcactatggtcagagcccttaacacATATTAGCATTTTCTTTCGAAA
GTCTCATAATTTatgaattttcctaaaataAAGCTAGCTcctttttttcg
gacacactgTAATAATGTAATACTATTTTAGAGGAAACAAAGCTCGCAAA
TCCATCACTCGACGCACACAAGAACGGAACAGTCTCACAGCAGAGCATTA
TCAGTCATACAAAATATACCAAGATTTTAATCATAACTGCTTCTTCATTT
GCGTTGTTTATATTTCTCGGTACTGTGGTTTTTGTATGTTATCGAAGAAG
CGCCAAAATGAGTAAAAGAAATGTCATGGTTACTGCTGATGATAAAAGAA
CAGAATAGCTTTTCGACTGAGCGCTGCAGATGACAAAGTCAAGACAATGA
AATTCAACTTCCATGGCTTGAATCGTTTAAATTTCATGAATTTCATAAAT
ATTGTACTTTgtctaattatttttttgtatttaatattaatttgatcaat
aaaaaatattatcTCAATATCTAAAAGTCTCGCCATATACGGACCTCACT
GACCCAATATATCCCTCAAAGGTCGTGTAACAAATtcatttttatcgaat
aatttctttgttttaacAGATTGAATCCCAAGCACAACACACCATAcccc
ggggggtacttaggcaaatggagggtacggtatgtgtcgcccttaagggt
aacttttctggatttccaaagtcccgctaagggttggaaaaatcagaaaa
ttaaatttataggaaataaaaataggaaaatctcgactttttacccccag
aaagatcaAAGTTTCGTCAAAATTGGTCGAATTTGTCCCAATAAGAGTCG
TAAAATTCacagttttctcttttttagtcccggtaagggtccaagggaTG
AAAATCGGGTGGCACAttcccccgtcagctcgcaaccctagtaccccccc
tggGACATAAACTTTCAAACTtcctattttttttcttccattgaaAGGAC
AACGAGTATTTCAAATGACTTGGTCGGACAATTTAAACTTTTAGAACATC
TCagtgatttaaaattttcaaaattctggtTTGTATTTTAGACATTATTA
GGGGTTTTATTTGTTCTGGGGggtttaatatttttaaaaatttcctgcTC
AAgggaaatttttcttaaaacggTGCGCTTTCTCCTCCTTTTCCAGTGCG
TGGTTTTTTACCGCCATTCTACGCCCATGTACAGTATTACGCCACCGCCC
TTCTATCTGTCCGTTTTGTTAGAAACGGCGCTTgataccagtaacacact
ttctgccgtctggacagggaaaagcttgctaaagtcggatactggctata
aaagatatattttctgattccgNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCC
CCCCCTGGGACATAAACTTTCAAACTtcctattttttttcttccattgaa
AGGACAACGAGTATTTCAAATGACTTGATCGGACAATTTAAACTTTTAGA
ACATCTCagtgatttaaaattttcaaaattctggtTTGTATTTAGACATT
ATTAGgggttttattttttcaactgAGGACGTAGGGAAGGggtttaatat
ttttatttttttgaggaCTTTCATTTCAAACGTTTTCATTTCACTAATGA
TTGGCGCAGAGGTGCCATGAATCTCTGGGTATAAAATATGAATTAAGTTA
ACTCTTAATATATAACTGCTctaacaatacaccttttcgaccgtggCCAC
GTCGAAAGTCGTGTGCTATTTGATTACTTGATTATCCCCCTGAAATAGAT
CCAATCTTTCTTTGAcacctttttcttttgaattaacGTGTGAAAAGGAC
TGGTACGAGTTTAGGGTGATAAACGGACCATTGAATTTCAAGCccaaggg
ctagaggcgaaactttaacccttctcaggcaagagagaTTGaggccactt
atttcccatccaaaacgcgcatagaacacACCGTAATTATGACGACATTT
Tctatctagtggttcctttgttttggaggactgcatttttttaaatctag
cgatagattttagtttcaatcgggcgtttgtgtaaaaactacgcgcgggc
gttctggatgatGGGAAATTTGAAGCCCCGAGAGGAATCTCCAACCGTTC
ATaatcaagaaaaagtgaagccttaagtttgccccgcatttagaaattta
gttaaaaagaaaaaacacaggtcacaggtgacctggatgggaaataagtg
gcttcatttcccatccagcaGAATTCTCGgatctacagggtgtccctaat
taaagtatcgagtcgaaacacaactatgagtagaaagttttatgtgtgtg
ttcacaaaattgtattttaagctctccctctNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgtgtgatggagaacg
ttcttatattttagcgataacacacacaaacttttctactcaatcgcatg
ttcaaactcgatactttaattagggacaccctgtatagctcctttgaaat
gaaatttcaaatacGGTTATTTGTCTTCTCTGTCTCCAGTGAATGATTTC
GTGTATGCAAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNtccgtcatcaaaaatacggcgcatat
tttaaggcttcaatttttcttgcctgagaaaggttagagattgacctcta
gccttcggcttgaaactcaatgatgcAAACCTGTGCTAAACAAAACAAGA
ACTTTAAAAAGAATCTATTCCCTTGCAACCAATCGTGATACGCCAAATGA
CAAGAATGTATAAACGCACCTTATAACTAATCCATTAATCACACATGCCA
ATAAAAGCGAAGAAAATAGTCCTTAGGGAGCTGAAAgccaaatcaaatca
aaaaggcATATAGATCACAAAAAACAATTCCCTTGGGACCTCAAAATGAT
AATAAGACCATATGACGGGAAAAACTATAAGTTAGAAATGTTTTGTCAAG
AAAATCATTATCATACAGTTTCATCAGAGATACAGTGAAGTACAGTGAAA
ACGTAAAAAGTTGTGTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagaggaatgta
aagagatggaaaaacagcttttctgattactcaaagttcaacgatcactt
ctattgaaaattctattgtaaaaacgttgattaggtcattaaaagaaagt
ccagaaaagacggctcgccatacaaatcggacggtttctacatgatttga
cgataaaaatgaaattttttttttcgttttttgccgATANacacgctaat
tatgcagattttttatagcgacaacaaaagaaacctatcaactcgacata
aactcccttaagggcaagagacctggtatatgacgagccatttttccatg
ttttcaagaagctgtttttccatctctttacattcctctgcatAGACCGT
CTCTAAAAACCAGTAATTCCACGTTAGCACCTTTTTCATTTTAGCTTTTT
CAAGCGAATGTGATACTGAAAAGATGACAATTTACATTCTTATATCCGAA
ATTTCAATCCCTGAAAGTGACATTTCCCAATACAATATTTCATGGAATGA
TCCTACATGTGGACCAAgtgaaaaatccaatgaaacataTTTGGTGTTGG
AAGCTGGTTATTCGTCTTGTGGCACTAAAGCTGTGGACGAAGGCGACCAC
GTTATATTTAAGAATCAGGTATCGTCAATTTTCAAATCCGACAATTcgct
tttcgaaaattttctcccGGTTTATATGGTTAGGAATATTTACTTCGTCC
CTTCCCCTGTCAAACAGACACtgctttttcccaaaattttccttagaATC
CTAGGAGGATTAAGGACATTTGGAGTTGTTCTGTATTTCAATAAGGAAAT
GGCATCACTTCAACGTAAATCAAAACACTTAGATATAATGGACCAATAAA
GTAATCATAATCTCGTATTGGTATAAGGATAGGCTACTCATCCTACTGAA
ACGCACTTCTGACACATATCTGAATTGTTGTCTAACTTAAATTCAAAGCA
AAGGATTCCAAACCTTCTCCTAGAGAAATACCCTAGGAGGTTTTATTTAG
ATAAATTGCTCTCAAAtgttcataaaaaagtgaggAACTTGGAAACTTAG
GACTTTTCTTTCCACTAGGTATCCATCAATTTAAACAAGACCAACGCATA
CAAAAACGATCTATTGGAAAGGATCGATACTTTCGCCACATATTCCGTTG
AATGCAACGTCCCACAAGGAGTAAATGTAACACACGAACATGGAGCCAAT
ATCACCAAATCTGATTTGGTTGAAGGCGTATCAAGTGAGTAAAAATAGGA
ATTATCAGCCGATAAAATGAGCACTATTTACACATTGAATTTGAAAACCA
AAGGGCTGGAAAGGACTTAAACTTTATATAGCAAAAAAAGTCTTAACCTT
AAAATTTTCGCCACAtctaaaatgaaagattgaatcgggcactttttttt
attttcacactGCATATTTTAGAAATCTggtaattttactttcaatctgg
cgtaAACCTTGCCTCATTGGTGATTTTATACACATTATCTTTCTAGGTTC
CACCGACCAGTTTACTGTCTCGATGAATCTTCATGAAGACGCAAAATTCA
ACGCAAGTCTTAAATATCCTGCAGTTATTGATAGATTGGGACGTTTCAAT
TTGGAAATTGAACTTGACACTGTTGCAGATCTGTTCATTATGCCAAGAAA
TTGTTATGGTACTTCTACCTCAAATCGTGATGATGCCATTCGAGAAGATT
TGATTACTGACGGGTAATATAACGCTTTTGTAGAATAAATTACAAAtagc
ttttttgaaattcttttatcGGTACGtctaaaaaattcataaatcttggA
TTAACCAAAACCGTGTCTGAGCATAAGTTAACAGTGTATAAGCATGCGTT
CCCCACCTGTTTCTGCAAACAAATTAATTTACTTGGACTAGaccagaaaa
aatgaaaagttcctGGTCTGCGAATCTTGACTAGAATTGACTTCGTATTG
AATAAAGTGCTAGATTCTGAATTTTCTTACAGTTTTCCTCAATATTTgcc
taaaatttaaatttcagaTGTCCCAATAAAGATCATGTTTTCAAGAAAGA
AACTGCTACTGACAATGGCAAGAAATTCCGATTTTCACTAAACGTATTCC
GTTTCAAGAACTCGAACGGTATGGTCTACATTCATTGCTCCACTCACGTC
TGTTTGAGCGGTAGCAACGAAACAAACTGTCAATTTGGTTGTGAACAAAA
TAAAGGACGACGAAGACGTTCAGTGGAGGATAATACTTTGACAACACNTT
GGTTGTGAACAAAATAAAGGACGACGAAGACGTTCAGTGGAGGATAATGC
TTTGACAACACTTGATGATGATTTATCCAAGGATTATGACATTCGAACAG
GATTGATCATTGTCactgaaaattctaaaagtaAGTTGCGacatctctga
aaaatttaCAGCATGAGTTAGGAATACTGCCTTGGCAAGTAAGCTTTtaa
caatagaccttatcggagtttttgatttttctaaaaaagcgatgcattgt
gggattgtttcgagtgtattacaatagaattccctagAGGAatatttcta
ttgtaatacactcgaaacaatcccacaatgcatcgcttttttagaaaaat
caaaaactccgataaggtatattcaaagaattttattaGAGGAATGACAG
GCTCAAAAGAttattaaaatataataatCTGATAAAAAAATGTTCATCCT
GGAATGGCAATGTGAAGGGTGGTTGAATGAGTAAAAGAAACATCAAAGAA
TTAATAACTTGATTAGACCATTAGGtttaaagtgccaaaaaatcaGAACA
ACCAATCCTGCTCATCTAAAATTTACTGGTTCACATTCTTTAGGCAAGGA
GTGCcacaatttttaatttcatattTGTCTCCTTCTAGATGACGATTCAG
CTCGTCAAGACACTCAAGAATCCAACAATGCTCAATTCTTTCAAACCACG
ACCAATATCATTCTCATTACAATTATCTTGGTGATGTTAACTTTCGTTTG
TTCTCTCTTGGTTTTTGTTGGTTTACGTCGCCGTCAAAGTGGTTCGAGAA
AGAATGGCAGTAAGCTGGAAATGCACTAAACCAATATATTTAAATTAAAA
CTGTTCACTTTTACTTATTTAAAAACTTCGGTTAGTTACTTTCAGTTAAT
TTTGTACTCAATATAtaaaaatatcatgaattttttaaaattgtataaat
tacatttgagaaataaagaaaaagattttacctGTACAATTAAAGTTTCT
TTGACGTTGGATTTGTCATGAATATTTAGATGTTTGCTATGAAATAGAGG
CACGAAGGGGCTGGAAAAATTCGTCACCCGGAAAGATGATGGAAAGTAAA
ATTTGCctctatatttcaaaaatatactacacgaaaaaataaaacacaat
ATTTCTTTCCTTAGAAATGAACAAGATTCGCCTCTGGCCCCTTTGGCTTC
TATTTCATTGCTTATGTATTTTACGTCATTTTTCTTTGGAAatggaaaaa
atcattaaaCTCCGGACCAAAATATTTATAATTAATACTTTGAAGCttat
ttaaacgtttttttcttGGGTTTAAAGTTGCATCCTTTAAAAATTGTTCC
ATTTTGCccctttttaactttattaTACTATATAGCCTCTTTCaatttga
agtgaaaaaagaAGAATCATCCCTTTTTCTAAAACTACCTCTAAAACCTA
GTATGAATGGGATTAAGATGTATTTTGGATAACGAATTAaacctaattgt
ttttgttttacattCGCATCTCTTTCTAATTCTTGCGTAGTACTACTTCC
AGATAGTCCAGAGAATGAATTATTTCGCGAGCAgcacttacctcgttttc
aagaTATTGTTATGGTAATCATAGTGTACAAGGGGGTTTCAGGTCCCACT
TAACAATTTAGGTCCCACCTAAAGCGTAacctaaaattcccaccctcAAT
CAAGATTCCCAGATTCcatgtatctcacgtttatcgtttcgtagAACACT
TTGTGCGCATTTTCTgcttgataaaaatttttccgTACGAATCCTTGCGA
AGAAGAATGATTACTAAATAGCAACACAACTCTTATCGTCTCCCTTCTCT
CGCAAACACTTCATTTTagtggtcggtttgaaaaatctctaatGAAAAAA
GATAATGACAGCAGACCCTCtacagcaatgaattttgaaataagtcgtag
atactgggtttTTGTACAGACTGGTCTAGTGGGACCTCCTTCCATTGCGC
AGAAAAATGATTTCCGGTGGGGAAATTCTTTGACCAttacaaaatttatc
aaaatctcATCTCCATTGTGAGAGCTAGTGTGATTTGGAAAATCCCTACT
GGGTTTTGCAAACAGGTACTTTCCACAGATGTAAAGCCCGAAAAAACGGC
TAAACATTTCTGTCTACATCACTGCGACAGGGATGTGAAAAACTTGAATG
ATTCAAAAAATTCGGCAAATGGAGAAAAAGCTATAAAATAAAATCATGTC
CCAATGGTAATTATTAATGTTGTAAATGACTTTCAATTCAtgccaaaaat
caaatttctatgaTTTGAGGCAATGGAATGATAATGTTGGTgggattttt
ttaagaaaattattttcgtaTTACTGTGGTGTATTACTATCAGTGTTGTG
AAGCTTTGGTGTTGGTAAGATGTTTAGGCTTCAGGCTATATTTTTTGTGG
TTGGTTTAAATATGATCAATATACTGGGTAAGTATTACGTGATTGTAATG
TTATATTTCACATTTTTTTGGATTCTTAAAATCTTTTGGGAGTTTTGGTT
TCATATTTTGCTAGGGAAATTTGAGATATTTCCgagattcaaagaaaaat
taatttgtaaaaatgtaaaaaaaggcATTGAACGGGGAAAGATCTATGCT
CAAATGATTAATTCCATATTTCTAAATCTTTAGTAAAAGcgaaacaattt
tgatttcaaattgcGTAGATATTACGCAATGACAAATATATCCTTAGCGT
CAGGATAACCTGATAACGTCTCAATACTCCTTGAGGCGAACGCATCAGTC
TATTGCATATAATTAATTACTCCTAACTTCAGTGGTAGCAAGTAAAACAA
GCAGGAAATTAAATATTATCTATGAATAAGTTTTGTACAAATTGGCTCGC
TAACATTCTCCCGTATTACCACGCGATTACGCTGCAAATCTTTCTGCGCA
AAATCTTATAATAAAGTATTAGCTCGAGTATTAGGATTTCATTTCCGTAA
TACAGAGCACATAATTTCCGGCCCAAATGGCTGGAGAAATTCAATATGCG
GTACTGAGTCAGTGGAACGTCGTGTTCTCCCAAACATCGCTCAGTGCTTA
GTTTTTTACCCTTATTGccttattacatgaaaataaatatggaagtattt
aacggccttgaaattaaaacgcaaaaaattaacacgaattttatttgctt
tttNNNNNNNNNNtaacggccttgaaattaacacgcaaaaaattaacacg
aattttatttgcttttttaaggacaccacggctggttttaattaaggggg
tttttattaatacgaaatttttcaattcgtgttgaatatttccatattta
ttttcatgtaataaggtatcTAACGTTTTCGCCTCTCatttgaaatgagt
caaaatgGTATATGGTATATTTCCTACACACGATTTTATCTGAAACTTCT
TTAATATTATCATTTTTAGGTAATTCCTATTCAATACAATGCGAGTTTAA
CAAGCTGACCATTATCATTCCCAAAGAGGAGTCCACAATCCTTcctgaaa
atgatatttctcAATACAATATCTCATGGAATGATCCTACTTGTGGACCA
AgtgaaaaatccaatgaaacgcATTTGATAATGGTAGCTGATTATTCGTC
TTGTGGCACTGAAGCTGTAGACGATGAAAATGAAATCATATTTAAAAATA
CGGTATTTAGGCTTTTATAAGAGCATATGGCCTTTTTagagtacactttt
tttattgaacaaTTTCATAGAAAAGAGTTTGGAATCGCCAAAATATATCA
TATTTTGTACTTTTCTGGACCACTATATTATACAATATCCAACCTAATCT
TGAGTGAAATTTCATAATAAGAAAACCTGAATCTATGAACGTTCTTCTTC
TGACAGGTTCACATAGCAAAGCCTTCAACTTTATCATACACGAATCCAGG
GCTAGAAACTGTTGGCACCTTTGCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003850XLOC_003850Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006857-exon-sc0000072-1491911889:138652..138714TCONS_00006857-exon-sc0000072-1491911889:138652..138714Clytia hemisphaericaexon
TCONS_00006857-exon-sc0000072-1510915933:138652..138714TCONS_00006857-exon-sc0000072-1510915933:138652..138714Clytia hemisphaericaexon
TCONS_00006857-exon-sc0000072-1575043694:138652..138714TCONS_00006857-exon-sc0000072-1575043694:138652..138714Clytia hemisphaericaexon
TCONS_00006857-exon-sc0000072-1491911889:140208..140440TCONS_00006857-exon-sc0000072-1491911889:140208..140440Clytia hemisphaericaexon
TCONS_00006857-exon-sc0000072-1510915933:140208..140440TCONS_00006857-exon-sc0000072-1510915933:140208..140440Clytia hemisphaericaexon
TCONS_00006857-exon-sc0000072-1575043694:140208..140440TCONS_00006857-exon-sc0000072-1575043694:140208..140440Clytia hemisphaericaexon
TCONS_00006857-exon-sc0000072-1491911889:156458..156528TCONS_00006857-exon-sc0000072-1491911889:156458..156528Clytia hemisphaericaexon
TCONS_00006857-exon-sc0000072-1510915933:156458..156528TCONS_00006857-exon-sc0000072-1510915933:156458..156528Clytia hemisphaericaexon
TCONS_00006857-exon-sc0000072-1575043694:156458..156528TCONS_00006857-exon-sc0000072-1575043694:156458..156528Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000072supercontigsc0000072:138652..156528 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
79.2915	78.1802	68.8544	58.7773	6.39118	4.71353	0.288685	0.370848	0.0305697	0.247007	0	0	0	0	0	0	0	0.0991925	0	0	0	0	29.528	16.1404	0	0.215159	2.17959	1.85079	8.93228	13.5369
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006857 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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