XLOC_003203 (gene) - C. hemisphaerica

Overview
NameXLOC_003203
Unique NameXLOC_003203
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000054:657245..659458-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003203 ID=XLOC_003203|Name=XLOC_003203|organism=Clytia hemisphaerica|type=gene|length=2214bp|location=Sequence derived from alignment at sc0000054:657245..659458- (Clytia hemisphaerica)
TTATGTATGTATTAAACGTTGCAACTGGATTATATTTTGTTTTAGTAGCG
ATCTCAGGGGTGTCGGAAAATTGAGCATTTTGTTGACCTTGAGAATAATT
GTACAGTAGTTGAAAATTAATTGTTTATCTACGTATTTTCAAGTATTAAA
AATAATGAACGAAAAATATGGGATTCCAAGAATTCTCACGATTTACGAAT
GATTTTGATTACAACGATGACCGAGATGATAGACATCAGAATCATTCACA
AGAGAAACAAACCTACCTACAGAATATGGTGATGAACGTTGGTGAATGTG
GCTTCAGATGCATCAGAACTACATTCTTCGTTTACAATCTCTTATTCTGG
ATGGTCGGCTTTCTAGTCTTGTTCTTAGCCGCTGTTCTACATACCACACG
AAACGAGGCTAGTAATGATTTTACAAAAATCTCTGGACTTCAAGGCTATT
TAAATGGACCCATCATTTTGTTAGTTGTCGGTTCCGTGACTTTGTTACTT
TCTTTTATGGCTTGTTTTGGATCGAGGCGTAATAATTTGGTGCTTCTTAT
ATTATACCTGGTTGTTTTGATCGTTATTACGGCAACCGAGTTAGGACTTA
TAATCCTGGTTTATTCTTTTCGAGTTCCTATTGAGAAAAGTCTGAAAATG
GATTTTCAAAAAACATTGAATCAATATGGCATACCTAGTAATGAAAGGAT
CACAACAGCGATCGATGCACTACAACGTGAATTCCATTGTTGTGGTAACG
ATGGATACGGGGATTGGGTTGAGACAACATGGTGGAATCAATATGACGGT
AATTACAGTGTACCGACATCTTGCTGTGTCATTCCACGCATGAAAAATTG
TAACAAAAATGTTGATAAGAAATTAGAGACCATTTTTACTGAAGGTTGTT
ATGAAGATGTCAAGAAATACCTTTTTGAGAATATACACATCATTGGTGGT
TTTGCTGTTTGGATTGTGGTCTTGGAAGTGGTGGGTATTTTGTTGGCTGT
TGCGCTGGTCATCAAGATACGACAAAACAACAGGATGCAACAAACTACTT
TAAATGGTGATTCGTCATATCATAACTTGACTGGTGATATCGGCTATTGA
TTGTCATTGCTCTGTAGTAACTTTGAAATATTGGTGACGATCTGTAGTCA
CTTCTCTTTCATTTCAATACCTATCTTTCGAAGTCCCTCTAAAGGTCGTA
AAAATCATANTGATCAGTAGTCGCCTTTCTTTCATTTCAATACCTATCTT
TCGAAGTCCTTCTAAAGGTCATAAAAATCACAATATCTTATGTCAGCCCC
TCTAAAGGTTACAAAAAACAACCAAAAACTTTAAATTTTGAGAAAGAAGT
CCCGGTAAGGGCCCCAAAATTAACAAAATTTCAGGTTTTTTCCTCGACTT
TTAGAACCTAAAAATTCCGATTTTCAAAAATGGGTTGATACCCCCGTCAT
TTTGCAAACCATTTTGCAACACCCTCAGGGTGTTAACAACACTAATCAAT
ATTCTTTTTTGAAATAATATTAAAACGGTTCGTTAGTAAGCATAATTACA
AAAAATCTTAACCAAAAATATTTATATCTATTGTATTATCTTTACTGGAT
AGACTATAAAATCATTCAATCATTAAATTTTTAATAAACAGCAACCTAGT
TAGTTCTTCCTGTCTTTAATAACGGCATCTTTTTTTACAAGACTTCAAAA
ATCGTGATTTTTTTGGTCAATTTTAATGGAGTTATTGTTTTGTATGCATA
GACGAGCTATCGTTTAGCTCCTACCAAGAAAGTTTGTTCAATAATGTAAA
CGTTCGATTTTTCAACTTCTTTCAAATATCCAAGGACATTCATTTGACGA
CCGCCCGCAACATGGATATAATCACAGATGAATGTCGAAAACATGTTTAT
AGGCCAGTTGTTTCAATGGGTAGATTTAGTGATGGGTTGTGTTGCCAGCA
AGGACAAATTGAACCACATTGAGTAGTGCTACAATTTGGGTACCAATTTC
AAAATACTCTGAAAAAAGATGGGGGATAGCTTGGTCCAAGACATGTAAAG
TTCAATGGGTGGATGTGATGAGTTGTGTTGCCAGTACGTTGCTGATGAAT
GCCAGAATAAGGTTTCTATATACGACACCAGAGAAGGGTTTTATTTGACA
CCATCATTGAGCATAGAAAATCAACAATATGCCAGAGAACAGGGATGCCG
ATATCGTTATTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005667TCONS_00005667Clytia hemisphaericatranscript
TCONS_00005666TCONS_00005666Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005667-proteinTCONS_00005667-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000054supercontigsc0000054:657245..659458 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TSPAN8PREDICTED: tetraspanin-8 isoform X1 Homo Sapiens
TSPAN4PREDICTED: tetraspanin-4 isoform X3 Homo Sapiens
TSPAN9tetraspanin-9 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.04	0.02	0.09	3.7	2.49	1.97	2.98	0.07	0	0.5	0.41	2.44	2.18	1.75	4.39	2.3	0.77	0	0	0.59	0.23	0.78	0.37	0.79	1.25	0.28	0.17	0	0