XLOC_003941 (gene) - C. hemisphaerica

Overview
NameXLOC_003941
Unique NameXLOC_003941
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000073:493931..497365+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003941 ID=XLOC_003941|Name=XLOC_003941|organism=Clytia hemisphaerica|type=gene|length=3435bp|location=Sequence derived from alignment at sc0000073:493931..497365+ (Clytia hemisphaerica)
TGGAAGAGatgaaaaggaaatattttgtaCGTACTGATCTGATGTATTAA
TGTAACGCGCAATGTAACAGACATTGTTCGACCGCAGTCGAGTAGAAAAT
TTCGCCATGGTTAAACTTCGCGGGTGGAGTTTTTCAGAACATGTTTCGAG
AAAAATATTGTCAAGAtttattgatttgttttgtttttttcccagatttt
tttctaaTTATTGTGTAACACCCACCATGTCTCGATCAAAATTACTTTCA
TAAGATGTTTTGATAGAATCTTCACAGCCAAAGTAGATTTTAAGGAAAAG
ATTCTTTCGATACTAGGATAAAGTCTCACATATTagcttttcagaatttt
ttttcgcggtttttttgcgaattttccaaaaatttacaTTTACACCATTC
AATTTTTATACCCCTTCAGACCGACATGAACGAAGTATTCAAAATCTTAA
GTATTCTAATTGAGAATAAATCAACAAAGAGGGGGCGAGAGGCCAACCTG
GCGGAAACAAAAAAAGTCATCGAGGCGAAGGTAATTTCTGAAGTTATTCA
ATTCGTTTTGATAAAGCTTTTTGTTGGCTGGGTAGACGATTTTTCTTCAG
AAGGCTACGTTCAACTAATAacatgaattttttgaaaaattggagatGCA
GGGTGATGCAGGAGATGCAGGGGTGACAATTCCCAAGGGGATCAGAAAGA
AAGCTATgctataatttaaatttttttataaaagaaaaacaaattatttt
ctctAAAGCTGCAAGAGTACGccgaagaagaaaatcaacgaGAAAAAGAG
ATAGAGGTGGATATGGTGGTGGAATTCGTTGAGAGAGAGCCAGAAGACAT
GCCCACGTTTTCTGGCTTTGGAAAGGTACCACAGATTACTTAACTTatta
ttctcaaattttcgTAGGAcagcttaaaggttttgttatCACATAAGTGT
TCAATTCCCGTTTCATACCAGGCACATATTTCGTATCAGGACAGCGTCTg
catattgttatattatgctgatataagcgaaGATTCTCCATCCTTGTGAA
AATGGGAAAGATTTTGTTAAATCTTTTCTTCTGAGAATGTGTTATGCATC
CGTGTGAGAATTGCCCGGGAATTGATAATTTAATTCATCAAATATTAATa
gaatctatatattaatatcCGTAGTATGTATGTCTGTTTCTGTTTTCgtt
ttctgtctgtgtgtcactttcgttttcgcaaacaatttctttgttctcga
gaagtttgttttgattgacagatcggatagagcttggtttagactttatt
cagctcgattcagcctttgttttgaatataaggcccgtctacatttagta
attttaatttctgcccagactTGCCCTTTTCTCttttatcttttgtttta
agtgttttcgaatgtatttaacgatcgtatttattataatggcattcgaa
ttcttttcaaaacaaaacaatttcgtttcatagaaaagaacatttcaaat
gtaaatcaaaacataaaaattaaagtcgaacaataacagcattcaaaggg
cgataaaaagcaagagaataaataaaaattagtcAATCTACTGTTAAAAA
TTGTGTATGTCaagtttaaattcgaaaagttatgacaagagTTGCAAAAT
TTGCAATATTCTTTGAGGCTTTTCCgctttttcctgaagaattgtcattt
ctacatttcactcctctttaccataatattttctcaaattgtcgaaaact
gAACGGCGTATTTAACGCGAGCAAAGCGAGAAAAATATCTCCGGgggagg
gttagagtcaaactttgaagatatatttttattcatttgatcgtttttta
aAACCAGCTTCAaaatccaaaggacttttagcgcgttcagctacagctta
accggcgtgcgacaccgggtaccggctagtttcgattaatacaataataa
ctcgtaaaaatataaatttcaaactttgatcgaggaaaattttgatagag
tgcactgcaagggtcttcttttagctggatcCTGGATACATTATAAGGGT
TTGTTTGGGGactgctacacgttttttttaagaaactagtttcaccaagc
agcctcaatgtttcttaagaaatcgaccttttgagcctcaaatgtttctt
aaatgtttctaaactttgtcaagcttaaaAGAAGCATATCGATAATACTC
TAACAATAATAACAGTCTAATAGACTAATCTAcagtactttcctatcttc
tatattgattttctgactttctcaagtgctTCTAACTGTTATGTttggtt
ctttaaaaaaaaaacgaattaaaaaatgtgattttctcattctcaacctc
agcatgtttcttagatgtttcttagtttttaggcattctgatcctcgtgt
ttcttaaaagtgtgtttcttaaaaaaaaaaaaacgtgtatctcaGGTTCA
TTTTTAGGTgacttcagcaaaataagatacaAAATCAAACTGAACTATAA
GGGTCAGAGACGTTTGATaattgatacaggggtgtacaAGAGAGCTGTGT
TTCAAGCTTAAGATCCAAGCGATTAGGATTATATCACGAACCACACAATC
TAGCTTCTGCTACAGGATGATTCGCTTTAAATATGCCTTCTATTTTGCTA
CTATGTAGGAGAGCGCAATAAGAGAAATTTTCTCGAGAGTAGTTTCAACG
TGCACGTTGGCAGCAAAAGAGTGCACGCATAGAGCGAACGGATTAGAGAG
GCCagcagcggtttgcgtgatggcgtgattagagatttttttggcgtgat
ggcgtgatcaagattttggcgtgatggcgtgatcaagattttggcatGAT
GCGTCATAGGGCAAAaattcgctattttttgcgcgatgacaaattttagc
gattttcgtgatgcatGATGGAGAATATTCTTTTGCGCGATGGCGTGATT
AGGCTGGGGGGCTTCATTAGAGTAGATTTCAATCatgtatttttgttcat
ttccaGGAGACGCATGGCGAAGAGAAGGATGGAGAAGAGGAGAGTGAGGA
TAAAACAAACAACCAGAAAGAGAACACGCAAGAGGAGACCACCCCTGTCA
ACCGCCAGGTACGTAGATTTATTATTTATCTAAGTAGATTGTCAACGTTT
GTAACCCTGCCCAAAACTAGGCCATTGAAATCAGCTGATCACGGAAGTTT
TCTTCATTACGATCAcgtaaaattgcaaaaaaactttaagGGCCATTAAG
TTAGATCATTTACCTCGAGTCCCACCCTCTGGGACCCCCCATCCAATCAG
gtcttaaaaaaattgaaaacatttctgGTAGCTTATAAACAGTTGATTGA
ATTGATGTATTTATTTTAGGTTGGCCCATCGaaaggaaaaaaattgttct
ttccaGATCATTCGCCCCCTAAGTTGAGAAAGGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007044TCONS_00007044Clytia hemisphaericatranscript
TCONS_00007045TCONS_00007045Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000073supercontigsc0000073:493931..497365 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.85	3.03	1.55	0.39	0.47	0	0	0	0.29	0	0	0	0	0	0	0	0	0	0	0	0	0	1.57	0.72	0	0	0	0	0	0