XLOC_004016 (gene) - C. hemisphaerica

Overview
NameXLOC_004016
Unique NameXLOC_004016
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000074:516574..524127+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004016 ID=XLOC_004016|Name=XLOC_004016|organism=Clytia hemisphaerica|type=gene|length=7554bp|location=Sequence derived from alignment at sc0000074:516574..524127+ (Clytia hemisphaerica)
tttagaTTTCCAAAAGAATTACCAAAGAATGCAAACACAAGATactaaaa atcatcaaaagcaTAATAGGAAATAGAATAAATACATTTTGTAATAGATG AGAGTTCAACAGCCAAACGTAtgctcaaatattttcagctatgTAAATCT TAGGCAAGAGACAACTTCCACAAGAATTTCAGATGACTTCAAATCAAGCT TCTCGGCATTACGTTTGCCTGAAGCTATGAGAGAAAATGAATTGGCATTC GGGGAATATGATAAAATCTTTGCAGCTGAATGGCTGAATGAGGATCATAT TATCTGTGGAACAAAGTGTAACAATGTACGTATTTAAACGTCTGACTTGA TCACAGATAGCCTTAGTTATATCTCTATCTCTAAATCAATCtacaaccaa aacaaaaaaggaggcaatttcaattttataaaTGGAATATTTGAAACgtt attgaaaattatttcaaattttgtttcgaatttcagCTTATTGTCCAGAA TATTACAAGTCAATCAAAATGGGAGATACCTCTCATGAAGGGTTCTGGTC ATATCCCTATTCCTGATAAAAACTGTGGCATACATAGTATATCTAAGAAT GAAAATAACACCAAGCTTGCTACTGGAGCACTAAACCCAAACTCTATTGG ATTTTATCGGTTGCCATCTCTGGAGCCAATTTGTCTCGGGGAGGTAAGAA ATTTGTAATATCAAATTGTAATAAGTTCCCTTTGATGTGTTTTTCATTAT TAGCATGGAAGTTGAAGTTTTTATCTAGTCAACATAACCTTGTAGATTTT AGTATTTATGATTTGAAGATTTATTGCAGAATTTGATTCCTGCTACTCTA AGGCAAGCCAGTAAATCTGGAATGTGATCTATACCGGGGTAAAAGGGAGC TGTAGAAGTTGAATATTCAGTCTTTTAGCCAGCATTTTATGTTTGTatat gtttttcttctttttagtttCACACTGATTGGATATTTTCTTCAGCATGG ATCAATGATAACACTTTGGCAACcggtatgatttttttcttactttctaA TCATACTTACTGTATATACGTTTTTATGGGCTGTTTATGTAATACAGTAC ACGTACAGTACACAAGGAACTTTCGGGTCACGGCTGGGGTTGcctctagc tcattttctgaaacatTTGCTTTGgccacccctgatattatagCATTATT ATGCTTATTctattgggtcaagggctatcgtttgtcatgcttagattatc taaaaaccTTTAACTTTACAATATTTAAAATAATTGGCTAATTTCAGGGC CCGAGTCTTAGCAACTTGATtgcttaaaaaaatgtgtagttatagttcat ttttttctatgTGTATATATGACCTCTCACACAAGATCTTTTCTAAATTA CACAAGAATTATCAGAAATAGCAGAATTATATAAAAGCGAGAAGTCATTT TTCACAAATCTGATTTCATATAAAATGATATATGCATAACAGTTATGCAA TGAACTACCCTGAGCTCTCTTTGTTATCTTTTGTAAAGTATAATTATATT GAAATCTATTTTAATGAGATTTAACAGAGTTTGCAGAGAGATTTATTTAT CATCTGATTTTTCATGTTTGAAAAAGGGTTTTCCTTTTAATTACATTTAT CAAATTTCAGCTTTTGCTCTATTTGCATAGCAACGAGAGACTGTTTCAAA CGTTTGCACATAAGATGAAAATTTCGACTTTTAGATTAAAATACAGTTGA CAGCCCAGCTcattaaaacttgaaatttgTTTCCAAAATAAACAATCAAT TTTCCCTGTCATCACCACTATCATTAGACTAAGCTAATTAAATCTCGATC GTTGATAAGGAAGTCGTTGACGGGAAAGTCCCACTCGTCTGTTTTTACAA AGATTTATACTGCCTAGAGATCTTTGTTATGACAAAGTTATGCTGACTGA TGAACTAGAAGAGAAAATAACTTCTCTGTAAGAAACAAACCTGACTTTCT TTCTGATAACTCAGCATTTTAATAaacgttttttatgagaacaaactata taagaacataaggcttcgatggcgaaaataagaacatgttaagaacatcc gaaggcttcagaaATTATGGAtgctctcataaaaaaacgtataaaccGAG ACTTTGTGACCTTTAACAATATGTAGACTCACCCCTCAGAGACCTACCTA GTAGATTGAGTTTTTTATCTTCTAGATTgatcaaaactttgaaacctTCA TCAGCCTTAGACGTGTAATGTTTTTTACTATATTGATGaaaacccccttc tcacagactcagTGGAATTTTTCAGTCAgtaggggtaaaaataacggacc aaaactcgacgGGGATTAACATTCCCATGCTTTtgtatggctggggattt caattcgattgtttttgagccagaaaattcagtggagatTGGAAAAACAG Cacgatattttgcagtgagggtttgcttatctgattattttcagcgtgta caaaaattggaggataattttccactggggacgatattttggccaatttt tcctgTGAGAagaggtcccagtgggtctgtgagaagggtgtgtACGAAAT AATGAAATGCAGCGTTTGTTTTACAGGTTCTCGAGACAACCGGCTTGCTT TTTGGACCATCCCCGACGAAATACCGCATTCAGAGAACGATGAAGGGGAA AGGGGAAAACTTTATCCAATTGTTCAACCTGTACAACATTTTCAAGGGGT TGGAAATAAAGACAAAGTTCGCGCTATGGTTTATAATAGTCTCTCTGAGG TATGTGTTAAAGCTATTTTTCACATTCGTTTTTTATTATAGACCGTTCCT TATACCGTTCCATGACCACTTTCGAGCTTTGATTCGATTAGATGTAAATT CGAATTTCGTATTTTGTTAGTCAATTCATGAATCAATTCACCCTAATACA AGTTTGCATATGTGATTGAGCCGATAGGTTAcgatcaaagtcataatatt tgagaaaaaaagggaaattcccacgaaatcttacaaccataaacgatttg gaagcgctctaaattaggttggacgggtagagttttaactctagacttaa gacttgagatctgaggaactaaaagtccaagaatggtccaataaattcta taatctcatggttgattgacatttgattgacgtttttgcttacgttaatt tgtaatttccctcctagcttttgtaatttccttcCTAGATTTTATAATTT Cccgtaaaagtgaaattttcatcgtttggaaattcatcaccttttttcaa ctttcttactaactttaaaggcttaagtaaatggaatgCTATCCAATAaa aactcgattcgcgtttctatgacttttttgagacctctttcagaattgtt aaaatttcaatccaaaccatgagattaaccaggaaaccctcggtcaaatt tcgaaatgttttaaaattgacctcgggaaatttatcccgaatttccctca taaccatgagattactagtactaaaCCCCTcctaaattgaaatattcgaa tagatttatcaatttgcccaaaagcgactttttcgcccgaactttaaatt gctgaaaacgaggaactaaccaaaattcccaatatattttgaccgagatt aTAGACCCAGTCCACTCTTTTAGAGGCGTACGAATTTACCTCCTGTCTTT CCATAGACAAAAAAAGCGACTTTAAATAAGACTTACTCatatagattttt acttttgaGAATGAATTACGTAAAtggaaaaatcgaaaatttcattCCGT ACAAATGACGTAGATTAACCAAACATGAAGaacatttctatcaaaatggg cttttccagaaaaaaatcgtgcaccccctgttgaggaggtccatttccgt tccaagggggtaaggtttgaaatgcagttgaattccataagggtagacga aaaaccgtcaaaaataagcggaattccaagggggtaatgattgaaaattt tcggaattccagaggggtatgatcctaaaattgcctggaattccaagggg gtaggtcacaaaaggttggacctcctcaacagggggtgcacggtttgttt tttttggaaaagcccaatatgaTATTTTCTTTTACTCTCATCAGCACTTA GCGACCATTGCATCGAATGGCTACTTGCACCTTTGGGATGTGAACACGTG TCAACGAGTGAGTATTTTATCATAAGGTTCTTTCGATAAGTTgtgttgtt ttggttttttcaaCATGCTTAGTGTTATTGGATACATATTCTTTGACGCC TAAATTTAAccgattcatgatatgcaccattgcaatgtcttctgacatta catcacggatccaatagctgattggtgaCGTAAAAttagtcaatacgtca ctttcaaccaatcagctgttgggtccgtggaagacactgcaatggtgtat atcatgaatagaggAGAGGAGGAATTATGGATTAAATCTtgtgcattttt ttgttttcatctgGCATATATTTCGCAATGTGGCGATagattttgctttc aatttggcttttgtgtgaaaaccacttTGAAGACCATGAAAGGAACCTAC AGCAAAAAAGTCGGTCAACTGAGCTAGAGCTAACTCTCTTCTCGTTTTAT TACAGACGATGACAACAACGCTCCCATTTATGAAAGAGAATGTTTGTATA GCGcacgagaaaaaaaataatttgctgTATGCTGTTGGATCTCTGTCTCA CGTCTCTCTGGTAGATACTCACGGAGGGAAGTCGGTCGCTAGTCTATGTT CAAGTGAACAAGGAGCTGGTAAGTAAAGACTGGATTGTATctaaatttct attttatttattttttaatgaataagAGTTATGGGGGCCATgttattcac ttttttgaagattttaaggATGTCAGTTTGCAAAAATATTCGTGTTTGGG CAAAAGAAAGGTAGGGTAGTCGTAATTTCTTGAAATAACATGATTTTATG GTaaagtagagtctctttaactcgaaaccCTATAACACAAATGTTTCCTT AACTCAGACAAGTTTtcttgtcccttcagttaacaaagCCTTATGaactt tactccataactcgaaaaaattGTGTTACccgtgtgtgttcgagttatag agactcgtGTGtacaattttagaaaatttgacaaaaaatcataTTGGACA TCATTTTGAGAGTTCGAGATGGGAaataaatttagtttaaaaacgTTTTC TAGGAGCCATATATGGTTCTGGATTGGAATAAATTAGAGTAGGGCAGATT GGAGATCTAGAGAAAAAGACCTAGATGTTTAAGGGGTCAAAGGTTTGGTT CAAGATTGAGAAGATATTCAAGATATAACAAATGAATGAACAAAATAGTC TTTTAGCTTGTTTTACATCATGTGGTTTTTAATTATTGAGGCTTTAGGAA TTATCGTATAAAGAGAATTAAAACTCGATTTTCTTATGATCTTGTTCTTA TGTTGATCCCTTTCagaatcaaaacattttaaCCAAATGCGAAAAAGTTA TCCAATGTCCTAATCTCATGAAAACTTAAATTTAAAAACCCCATTCTATT TTATAACAGCACCCACTTTGCTCTatgtttttatgtatttttgtcgtata tttttgcttttctttacacttcaaatctttaaatcttcaaattattattt tctacGCTGGAGTCTTtataaaagtccaaaaaaccccgAAGAACTAAAAT TTGTTCAAGTTATGTATTGAAGTTCAAgaagttaaggagacattcgagtt ataggaGATATTCGATTCACAGAGGCTTAAGTTGTGGAGATTCTACTTAG AAAATCGCTCAACTTAAAACATTATATTAACTTGAAtttctttctctctt tttgcAGGCGTACGGTCAGTCAGTTTTAATGATTGCATCGTGACAGTTGG GACTGGGTACGGGTCATTATTATTTTACGACATTCGAATGAACAGACTTC TTCAGCGGCAAGATGGAACACAATGTCAACTCAAAGTCGGTCACGGTTGG CTGGTAAGTACaatcgatttttttttcgagtCTCGATTAATGCGATTATT TTTCTTCAGCCTAAAGGGATTAATCAAACTGTTTGATGACCACGACCAAG TGGTAATTTGCTCCTATTGTCCTGAAAAAAACACAAACCTTTACCTAAAT CCCTTTATAAAACTTTGTGTgaaacggtgaaaaagaatgcggctattcat aatatgcaccattgcaaagtcttccacggacccaacagctgattggtgga aagtgacgtattgacatattttacgtcacttacaaccaatcagataTTGG GAcagtgatgtaatgtcagaagacatttcaatggtgcatatcatgaatta taatttgatgttcccctttttaaaaatttgttagTAATCCGGCATCacaa ttttttcaattgttAAAGTTTGATGTCAGTTGTTTTCTTGACTCATTTGA ATCATTGCTTCAGTTCATTTTTTAGGTAGCTGACCTGACTGATCTGGAAC CCAGTGCATACAATCGAAAGAATATCTAATGTCTAAAAGTTCTGCATTAA TGTCTGCTATCCATGTAAAATACCGACTCTAAACTTTTCTCTACCTTTTC CTTAGCGGCGTGATTTAGTTTACCAGCAGTATTTCTGGGAAGCAGAATGT TATCCGAACGCTATCTATGCACACAGTTATCATCCAACTACCATGAAACT TCTGTCGGCTGGTGGTCCACTAGCTCTGGGGTTATATGGTAATTATCTGG CTTACTGGGATTGATGCTCATGTTATACCTAGATCTGTTAATATATATGA TTGATGTTATACATGTTACATACTTGGTTTTATATGGCATATTATGCCTT CAAATGATGAATGGTGCGTACATATTATGAATGTTGATATGGTACATCTT CATGTTTTTGTTATGGCGTCCAGCAATGATGTTACGCAAATTTTGATCTA CGAAAGTAAAGACCTCACTACACTGGTTTCGAAAGGTAACAAATTTCTGA CTTGTTTTAGGGTCAAATGTTTCTTTCCTTTAAGATTTATGCGAAACATA TTACATCAAAGAAAAACGTGTTACAGCAGACTACAAATTCCTTGCTGAAT TAGATAATTGTTCATTTTAAGGGCGAATACTACATACTTTAGTAAACTCA AACTTCGAAATTTCTAACTTTAAATACACTGTTTGTATAGGGTACGGGTG AAACTTTTGTCGCTTTGTTGTTTTCATTTCTGTAATCGATGGCTATTTTT GACCCATCCCCATTGTTATTTGGTTaattgtgtttttttctttctccgTC CAATTTGTAAATATTGTATATATGGTAGAATACAGTCAAGTTTTTTAAAG TGAAATTGTTCAAAACTTTCCTCAAGGAAACTGAAAAATATTGGTCTTGA TAGACTATATTTTATAGAAATTAAACTGATCCTGACTGATTCAAAGACAA AAAATGGAAGAATATAGGCCCGTTCAGTACCGTTTGATTacactcttctt tttt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007161TCONS_00007161Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007161-proteinTCONS_00007161-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000074supercontigsc0000074:516574..524127 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DCAF12L1DDB1- and CUL4-associated factor 12-like protein 1 Homo Sapiens
DCAF12L2DDB1- and CUL4-associated factor 12-like protein 2 Homo Sapiens
DCAF12DDB1- and CUL4-associated factor 12 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.04 2.31 0.88 0.71 2.7 2.38 6.7 8.07 7.44 7.75 8.13 4.38 11.51 8.79 3.63 4.51 24.79 5.91 9.61 9.86 22.95 20.02 7.11 9.99 64.16 44.37 2.96 2.47 3.65 4.29