XLOC_004716 (gene) - C. hemisphaerica

Overview
NameXLOC_004716
Unique NameXLOC_004716
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000085:455912..459678+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004716 ID=XLOC_004716|Name=XLOC_004716|organism=Clytia hemisphaerica|type=gene|length=3767bp|location=Sequence derived from alignment at sc0000085:455912..459678+ (Clytia hemisphaerica)
GTTTTAGTTCCCGATACAATTTATTTAGAAATCATACAATACATAATCTG AAAAAATGGATTACGATTTCAAAATGTCAATGaatgagaaaagacaaaag GTGGAAGACCTGTTTGATTTTGAAGGTTCTAAAGTTGGTAGAGGAACATA TGGTCATGTTTATAAAGCAAAAGCAAAGGATCCGTGAGTATGAAATTTCC TTAAAAGAGAAGATTCAACCCCATAATTCGATAAAAGGCATTGAGCAATG ATATTTTGTAATCCCTTTTTTTGTTCAGCCAGCACCTTGTCAAAAAGTCA GACtattaattaaaatcattcttttCGAGGGCTCTGCTTTTATTGAGACA ATACAGGACCCTTTTTTCATTACAGTAATGATGAAAAAGAATATGCTCTG AAAGAAATTGAAGGAACTGGAATTTCTATGTCTGCTTGTAGAGAAATAGC TGTAAGTAATGCTTGGTTTTTTTAGATAAAACGATCTTGGTAATCTTTCA TTTAAAATGGTTGTAAGGAATGTCTTGAATTgtactttgatttttttatt tcagcttTTGCGAGAACTGAACCATGCAAATGTGATCACTCTCAGAAGAG TTTTCTTATCACACTCTGACAGAAAAGTTTGGTTGTTGATTGACTATTCT GAGCACGACCTATGGgtttgtatttttaatgttattgaatgaaaatgacT AGTCCtgaaatcattttttaaaagGGCTCCTTCACCTAAACTAGAACCAT TCTTTAGCTCTTTTTCGATAAAGATTCAAGATTCTTTATGGACCCCATCA GAGGTCCTTGGAATGAATTTATCTACATTTTTATGCTATACAATTTCTGA ATATTCTAAACTTGACtcctcaaaatttcatattaaTATTTTAGCACATA ATTAAGTTTCACCGCAATGCTAAAGCACACAAGCGACAAGTCAATGTTCA GAAAAGTATGGTCAAATCTTTATTGTATCAAATCTTGAACGGTATACACT ATTTACATGCCAATTGGGTTTTGCACAGGGATCTGGTAAGTAAATTCCAG TTCAATAAAACAAATCCttaagaatttttcttttttgagagTAATACCAT TCaacattctttttcatttctttaactCTTTTGTTTACTCACTACTCTGG CTTTAGACGATTAACTTTATGCTACTAGAGAGAAAAACATATTAGCTTTC TAAAAATCTCTTTTAGAAACCTGCCAATATTTTGGTTATGGGTGATGGAC CTGAACGTGGAACTGTCAAAATTGGTATAATACATTTTTAGCTTCTGACT GTTAATTTTCGACTACTTATTCCACTGTTTTGCTAGCCTATGGTATCAAC ATAACTTCAGccttaatttttgaaatattcacaatacaaatcagtttttt gaaaaattgtttgtttttgttttaaagcaaCTAGTTTTAAAGGCAGATAG ATGAAATTATATATGACGGATTACACTCAAATAGGGCAGTGAGTGATGCG ATAATCTACTTAATTCACTTGTCATTATCTGCtgataaaattgatatttt ctcTTATGTTGTACAGCTGACATGGGTTTTGCTCGTTTATTCCACTCACC CCTGAAGGCTCTAGCCGATCTGGATCCAGTCGTTGTAACATTTTGGTATC GTGCACCAGAACTTCTGCTCGGTGCAAGGCATTATACCAAAGCTATAGGT GATTTATGTTGCTATTTTGCTAAAAATAAGATGTATAGAATGATTTTAAA ACAAGTTTAACAAAGGTATAAAAATCTGTATCGTTTTTAACCAACCCAAA ATTATTTGATGCAGTTTTACAAATAATGTAATCTAGCCAAgctcaaaatg tgaaaaaaaattcaaatggaTCTTAAAAAGTTCTGGGAAGCCATCATGTA TTTCTCTATATTATTTCTCATTCTCTTCTGAAACAATAATTAACACTTTA AATTCTCCAGATATTTGGGCCATTGGTTGTATATTTGCAGAGCTGTTAAC TTCTGAACCCATTTTCCACTGTCGACAAGAAGATATCAAAACGTCCACAC CATATAATCATGACCAGTTAGATCGTATTTTTACTGTCATGGGATTCCCT TCAGGTTATTTGTATTTACTTGCCTTAAACTAGCCtattttttcatatta ttttcaCAGGGTTTGGCTAGAAAATTTCGGGGACTTCCTAGATTATTGCA CCCAGAGCAGAAATAGCATTTGTATAGTTTTGTTACTGGAAAAGtgttta tttatgattttttttcttgtcgACTAAAGACCCATCTAGCTGCTAGAACT TATAGATATTCTGATGGCGGATTGGGTTGGGTCCAGGCTGTAAAAGAGCT GATTTTGGTTGAACCCACAATTCTCTGTAAACGGGGGTTAGGGTTAAGGC CTTGCTTTAACatgtcaaaagaaaatttctaccAGATTACTCTAGTTGAT TTTGATTAGCTtcgagctaagtacacattgtactactttgcatcaacttt aaagaaaagaaacacaaACATAATCATAAACATTACTCTAGAACAGTCCG TTGAagcttttactttttattttagaaaaagattGGCCAGATATTGTTCG TATGCCTGAATATCAAACTTTACTGAAAGACTTTCGACGTAATAATTACA CTGCAAGTTCACTTGCAAAATATATGGATCGTCACAAAGTGAAAAATGAC AGCAAAGCTTTtattcttttacaaaaattattaaCTATTGATCCAACAAA GAGAATTACCTCAGAGGATGCACTTAATGATGAATACTTCAAAGAAGAGC CGACGCCTACTAAAGATGTTTTTCATGGAATGACAATACCTTACCCAAAA AGAGAGTTTATTACTGATGACGATAATGATAATAAATCGAATAAAAATAG TCAGACAGCAAAAACAAGCACTGGTGGACAAACTTCGAACCCAAACAAGA GGGCTCGTGTCATGGCACCTGGTCAATCTACACAAGACTTTCAggtaatt tttggacctacttgGAGGTCcaataaattaaccgttgtccgttcgtttgt ccgtccgtccgttcgtctgttaccagcttttctcgagattggctcattag ttttttctgatttttggcacaatgatgcaaaatggcaatgcccaaaatgt gacggagcccgattctcgaaaaaaaaaaattttcggccgaaaatgccgga aatatgccggaaaaactgtttttttggccttttctcaagattttatcatt agttttttctgattttttgctcaaagatgcgtattaacaatgcccaaaac atggcattTTAAATTTCTGTTTAAATAAAAGAGCCACTGTTAATAAGCTA ATCTCATTTTTTCGTTATAGAAACGATATTACCAACACCCACAGCACGCG CAACACAACATGCAGCAACATAAACAACAACACAACAAACAGATATCACA ACAGCAACAGCAACAAGGACAAATGATGGGTCACAGTGGCTCCTCTGCCA CTCTGCATTACACTTCCAATAATCAGCAGCCGCGATACTGATGATCTTTT TAATCTTTTCAATAATCAATTACTTTTTATAGTGaagttttattcatttt ctGTGTCAGGGATAATGTGCTTAAACTTAACCAGCCATATTATTCTCGAG AAATTTAGATTCAATCTCAATTAAATTCTCACCAGTTTTCTGTTAAGGAT TTTTGTTTCTGTCAGGGTTTTCATCAAATTATCCAAAAAagatttcctga attttttttactactca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008412TCONS_00008412Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008412-proteinTCONS_00008412-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000085supercontigsc0000085:455912..459678 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CDK8cyclin-dependent kinase 8 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
33.91 31.88 16.9 13.83 20.43 15.99 16.59 17.47 12.44 13.11 9.38 8.1 9.73 9.55 9.71 11.97 11.96 13.95 7.87 8.34 15.95 14.14 41.6 38 9.97 10.18 14.64 10.73 30.75 29.7