XLOC_004809 (gene) - C. hemisphaerica

Overview
NameXLOC_004809
Unique NameXLOC_004809
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000086:105468..108864-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004809 ID=XLOC_004809|Name=XLOC_004809|organism=Clytia hemisphaerica|type=gene|length=3397bp|location=Sequence derived from alignment at sc0000086:105468..108864- (Clytia hemisphaerica)
CATTTTCGCTAAATACCACGTTTTTATGCAGCTAGCGTCGAGGAAGGTCT
GTTATTATTGTAGAAGAAGCATTTCATTTCTACAAAGGTTAAATATCGTG
ATCGTTAAATATTGTGATGGTATAAAAAACATTGGTATTGTAGGCAGGTA
CTAATTTTGGTTTTATCGGCACTTAATCGTGACACATTATCGACATTGTG
CCGACATCGCTTTGTGGCGTCGTCTTTAAAGTGTAAATTTCGGTAGCTCC
GAGAACCGACAATTGAGACAATAGCAATAGAAACTATTATCTAATCAAAC
AAAAGATTCTTGGACAATAAAACAATCGTTAACTTGTCGACAATAAAGGA
AAGAGGACAGAAGTGAAAATTATTTTATGCGGTTCTATTGTTCTATAAAC
AACCCATTGTTGTAAAGGAATTTTTTACGACTTCGCTGATAGGGAAGCTA
TTTATCAAAACAAAGACGATATAGAATTTATTGATGAGAGAACAATAGAT
AAAACACAAAGTGATCAATAAAAGACAAAGAACTTTTATTACGTGAGAAT
CGCTACTTATCAGCTTGAGCTCTTTCGTAAAACATTTGAGCGATCAGAAC
TATTGTCGACTTGTCTTTATTCTCTTCCCTTTTCAAACCTTTGATTATTT
TGACAAATTTGTCAAAGAAAAGAAAAATTTGTCAAAATCTTGTCAAAATT
ATTTAAAACATTTTCAAGATCGGATTTTAAAAACCGGTTGCAACATTGTA
GCTGCAGAGGAAATCGTTGGACTTAGGAACTTTGGAATCTTATTAACATA
TTTCAATGATTTTGACAGAAGTGGAGTTGTAAGTGTTACAATAATTTTGC
TGGCTTTCGTAAATTAAGCGTGAAAATACCAAAAGTTGTTTTTGTGATCC
TAAAGCTTTAACATTGAGGAAAATCGTGAATCGGAACAAATGGTTGCGAT
GTCGTTACTCATCGAGAATCTTTCATCCAGTATCGTCGGACACGATTTAC
ATTCACGACACCATCATGGAGGCTTGCGTGTGAAATCAGAATGCTCCGAT
CTTATCGATGGAATCGAGGATATGGAGAACGAGATTGTTATGACACGATC
GGGAAATACGACTTCCGTCATCGGATCACTCAGCGGCGTCAATTTATCCG
GAACTCTAGATCATCACAGCTCCAACTCCTCTACTAAAGACAATAATAAC
AATACTAATTCAAACAATAACAATTCTTCGAGCTCTTCGGCGAACGATAA
AGACACGGCGACAAACGATAAAGATCCTAACGTAAAACCACCATACAGCT
ACGTCGCTCTCATTGCAATGGCTATTAAAAACGCACCAGACAAACGCTTA
ACATTAAATCAAATCTACCAATTCATTATCGAGAAGTTTCCATTTTACGA
GAAANTTAAAAACGCACCAGACAAACGCCTAACATTAAATCAAATCTACC
AATTCATTATCGAGAAATTTCCATTTTACGAGAAAAACAAAAAAGGATGG
CAAAATTCGATTAGACATAATTTAAGCTTGAACGAATGTTTTATCAAAGT
ACCTCGCGAGGGAGGAGGTGAACGAAAAGGGAACTATTGGACTTTGGACC
CGGCATGCGAATACATGTTTGAGGACGGCAACTATCGACGTCGCCGACGA
ATGAAACGTCCTTATCGTCAATCGTCGCATTACCCCTACCCAAACGGATT
TTACGGCGGTGACTTTAGGTACGGCGCGTACAGCTGTTACTCCTCAAACT
GGCAAAGCCTCTATCATTCAGGAGCAACGTCGCATCCAAACTGGCGAAAC
AGTACTTCATTTAACTACCCTAGTTCCTCTCATACCAGTAATTTCTCTTA
CATTGACCCGACTGCCCACCATAACCTACCAGCAACAGGCTACGGGGCAC
CATACTACGGTACAAACAGTTCCTCATCAAGTTTAGGAACAACCTATCAG
GGAACTTACCAACCGCAGTACTACACAGGAGCTACCTCCTCTACCTACGG
AAGCTCGACCACTACCTACGGGAGCTCGATCACTACCCCTTCAACGGTAG
GATACAGCCAATCAGCATACGCTACATCAACTACGGCATACAAAAGTGAT
TCACACCCTACCACCAATTATCACGAACAATACTGGGCACAGCCTTCCTC
ATCAACGCCTTCCACTGGCGGCAACACCACCCCACAAACTGGTGTCTTGA
AATCGAACTATACTACAGACAGCCCGCCTTCACTTATGTAATTTTGTTAT
TGATAATTTTCGTTTCGGGGGAAGTTTACGTAATTTACTACAATCCATAT
ATACGTTTAACTAATACCCAGCTGGCACACGACGTTGTTTAAACGTTCAT
CTAATGTTATATGGACGTTGTGAATGTTAGATAAACGTCGAAAAAACCTT
GTGTGCCAGCTGGGTAGGTGAATTGACTATTCTTAAAAACTAACGCTTCT
TGTAGTCTTGTAGTCTCACTACATGAAAAAAATTATCTTACTTTTGTGCT
ACCGCTGCTAATATGAGATGCCAAATTAACATCTCAACTCTGATCTTCAG
AATATTTTTTTTTTAACAACTATAATATCTTTTAATTTTTAGTTCTATTC
AACGGACTTTTTAATTTTCAAAACTATATTCATTTTAGTATAAAATATTA
TTTAATATCTCAGGAATTATTTTGTACCTCAAATGTTTATAATTTATAAA
TCATACTGCTCTTGTATAGGCTAAAAGCTAGAGCAACAGAGTCGATGTAT
CAGCATACAAAGGCTCAATGGATAAAGATTCCTTTGATAGATTCCTTTGA
TAGGAAACTTGTTTTTGTTAGCACGGGGACAGACTGAAGTCTCCTAGACT
GCCGCGGTAACATTGATACTGAAAAAATGCTAGAGCATCAGAGTCGATGT
ATCAGCATACAAAAAAAAGATTCCTTTGATAGATTCCTCTGATAGGAACC
TTGTTTTTGTTAGCACGGGGACAGACTGAAGTCTCCTAGGCTGCCGCGAT
AACGTCGGTGCTGAAAAAAGGGTAAATAAACTAAAGAACTTTTTCAGAAT
CTTTTGAGAGGAACAAAAAAAAGGTATCAAAAATACACTCAATCAAAAAC
TAACGAAAAAAAACCGGCCGACACTTGTCATACCTAAGTGTTAAAACCCT
TATTTTGTGACTTTCTTTCTTTAATCCGATTATTAAGGTTTTATCACATA
TATAATACCGAATATTTGTAACAAATTTTCAATGCATAGAACTTCTTTTA
TTTTCCTTTGTTTGGAACGTCATAAATTAAGCTGTATTGACGGAATGTAT
AGCTCACACAAATTGTACAAAGTTTAAGAAAACCACAATTTTTCATATAC
AAGATGAGTAGGCCTTCTCATAAGCAATAATAGGAAGTTATATTAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008599TCONS_00008599Clytia hemisphaericatranscript
TCONS_00008598TCONS_00008598Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008599-proteinTCONS_00008599-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000086supercontigsc0000086:105468..108864 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.02	0	0	0	0.01	0.01	0	0.01	0.05	0.01	0.01	0.01	6.94	5.99	0.03	0	6.5	6.5	2.88	3.02	2.51	2.93	0	0.02	0	0