XLOC_005116 (gene) - C. hemisphaerica

Overview
NameXLOC_005116
Unique NameXLOC_005116
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000090:155890..162133-

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005116 ID=XLOC_005116|Name=XLOC_005116|organism=Clytia hemisphaerica|type=gene|length=6244bp|location=Sequence derived from alignment at sc0000090:155890..162133- (Clytia hemisphaerica)
AACAAGCACTTAATCGCAACTTGATTCGAACTCTATCAAAAGTTACAGCC ATTTTTGTCTCCAGCTGCAAATTATTTCGAGACAGACTTTAATTTCCTAG TTACGTTTTACATTATATAGCCAGAGTCTAGTGGACTGAACTCATTGAAC CATCTTTTGGCATGGTTTACAACGCTCTCATTTTACTTTGTCTGATTGAA GCCATGTCAAATTAACTTTGCTCATTTTTCAATCCTTCACGCATTTATCC TTGATGGTTTTAGTTTTTGATTTTACAAATTTTCGAAGAATCTCTTTCCC TACATTTATTAGCTTATGGTTTTGTTTCTCGATTTCAGTGACAAAAAAAA CAACACAAAAAATTAAATGACAAATATTATAATCTACTCTATCGTTGTTG GGTTATTGTCTTTCCTGCTGTACGAAGGTTTAGTGTATTATCAAAGTATG GCTGAAGGCGGAAGCGAACAGTGCCCACCGCCATCAACAGAAGAGACAAC GCCCTTAACAAACGCTCAAGATATGACGCAACTCAAAGCTGTAATGATTG GTGCAACAGGAGCAACGGGGAAATATTTATTCGCTGGATTGATTAAAGAT CAGGTACTGGAGTAATTCATTCTTCTGGAATCGAGATACAATATTCCCTG GCCTCGTTCTGAAATCAAATATTAACTTCCAAAGGCTTTAAAACGTTCGT TATTGTATGTATTCTTAAAAGACCGTTATCGATTTAGATGTCTGAAAATG TTGCAGTATCTTGGCAAAATACTTTAATGGGATAAACTTTCGCGGGAATT GAATTGCGCGGATTTCGTGGATTTGGGTGTCATCCGCGAAAATCCGCGAA ATTAAGTCCCAATGGGAATTTGGAAGGGCCTCGTCCAAAATATGTCAAAT AAATACTAATTGAATGGTTACTTGCACAAAGAGGCGCAAGTAATGTGTAT TTCAACAACCAACATGCATGATTTGATAGTAAAAGTCACAAAATCGTGAA AATATTGCCACCCAATAGTGCCACCCGCGAAATTAAGTCCCCGGGATAGG CCCAAGCGCAAAATTTAATCCCCGCGAAAGTTTATCCCATAAAAGTAATT TGTAAACGAGGTCAACAATGATTTTATGTATTCTCAGTAGTGTACATAAA TTCTAGTTTGCCATTTTGATAATAAATTTACTTTCGTTTAGATTATTAAC ATTGTTAATATAAAAACAAAAAACTATGTTTTCTTTTTCAGAGATTTACG AAGATCACAACGATTGGGCGGAGGGCGGCTTTCATTCCAGAAGATGTGGA GGGCGCCAGCGATATCAATTTGGAAGAGGAGGTGAAAAGTGGGCGGCTTG TACAAATCACTAAAGAACAAATCGGTAAGGATTCTTCATAATTGTTACGA ATAAGGGCCCCAGATCTGTAAAGCCCAAAGGGCTAGATCTGCGGCCTTTA TCGAAAAGTGAAGCGAGTTTTGGTAGGATTTTCTACCAAAGAAATCACGT GACAATAAGCAATTTCACTGGTTTGAGAGATTTGCCGCCTACTTTTTTTG ACCTCGCGCTCCGAAAACAATTAAAATGCTAGATCCTATCCATCGGCACA AAATTTAAGAAGTCAAATTTTTGCTTCACTTTTTTTTACTGAAGAAAGCT TAAAGTTGCCTATCTAAACCTTCGGGCTTTACAGATCTGTGGTAAGGGCT AGTGAGGGGGAGAAGTAGAATATCTGTCGTTTTTATCCTGTATCATTGAA ATAAAAGGCCCTGCAGTAATGGAACCAGACTTAGTCGCTTTAAAACAAGA TTAAGTCCTGATAGTTTTGGGTTAAAAACCAGGTTAGACATACGCCACAT ACTTATAGAGCAGAGCGCGGTGTGAGATGACAACTATATCTCCTTCTTTT CAGATTTGAACAAAGAGATTAACAAAGAGACAGTGGGCAAATATCTGGAA GGACACGATGTCTATTTTAGTGCTTTCGGAACTACGCGTAAAATAGCTGG ATCAGCGGTAAGTTTTGCGAGTGTATTGGTCTATTTTATTGCCGTATATC CTTTTTTGGTCAAATACATAATTAATAACAGTTTTAATCGCACGATGGGT TATTTTTTCTTATTTGGCACGCCCTCAAAGAGAGCAATTAATCGTTAATT GCATCCTGTAGAGAGCAATTAATCGTTAATCANNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNTCGAAAATTGCACTCGTGATTTTTTTTGTTTCTAATTTT CCTCGTCCTTTCGGACTCGGAAAATTAATAACAAAAAAATCACTCGTGCA ATTATATTATTCGAATTGCACTCGTTATCATATACTAATCGAGTTAAAGG ATTATTTACTCTATTGAGACGTTTCCTTAAAATAGTTTATGCTCACGTAG TTCTTTCTCTTTTTGACTTGAACACCATGACTTTTAGAAAAGTGTTTTTG CTGGACTGAATTTTCGTTTTACCTGGTTATTCCTTTTAAAAATAAGCTTA GAAGGTTAAGAATTACTTCTAGGATTCTACGAGTTTCTGCTAATCAGAGA ATTCCGGTGTCTTTAGGAGGAGTTCCGGCGTATTGATTACGGGATCAACG TAGATATGATGACGGTTGCAAAAGAAGTCGGAGTTCCGCATTGTTCATTC ATGTCAAGTCAAGGATCAAACAGCAATAGTTATTTTCTTTACATGCAGGT TAAAGGGCAGGTACGTTCAGTCATGAGGGTATATTGTTAGGTTTTTGAGA CATGCCCTATCTCACCCAAGCGTGTACATTAGATTTGAAAAAATGCTTTA TCGATAACAATAAAAGACAAATCGGGGCAAACCCATGTAAAGATAACCTG ATCATATATGTGTACTAAAAGGATTTTCGAGAATTTCTTGCATACCACCA CCCCATTTTAGAGAAGTGGTATTTTAGTACCCATCTGGGACATTTTGACA CGGAGACAACCCAATTTTGGTATTTTCAGGACAGATATGTCTTCTCAGGA CCATTTTTCTCAAGCGTGCTGATTTTTGCAACAGAATAAACATTTTTCTC AAAAATTAATACTTTTAAACAATGAATTGAGTAAACATTAAAGACATTTG ACTGCATGCAAAAATAATTGAACTTGGAAAGTTTTCTTTAAATGAGAAAA TTTTACAATTTTTTTTGAAAAATTGCAAAAATTCTGAATAAATCCCGAAC AATTCTGAAAAAAAATTCATAAAATTATAAATATTACTAATTTTAGTACC AATTTACTAAAAAGATTCTCTAATTTTAGTCTGGATATCTTTTTGGTACT GGCCATGGGTACTAACCATGGTACTAACCATGATACTAAAAGGATTTTTA ATTTTTTTAGGTATAACCACCACGTCACTAAACAACATGATGTCCTAGAT TTTAGTATCGAACCCGCCCCCCCCCTTGTTACATTATATGTGAAAAATGT TTTAATTAGTCTACAAAAATCATAAATGCAATAAGATTGTAACTAATAAG TTTTAATGATGTCTGTTTTTTCGTTTCTTTAGATTGAGGACAAAGCCAAG GAGTTGGATTTCGATAAAACGTCCATCTGGAGACCTGGAGTGATGGATCG GGGATCTACAACGCCACGATTTACCGAAAAATTAGCCAGTAAGCTTTTCC TTTGAATTATTTTCAAAATCTTATTTGAACGATTGAGGATGAGAAGATTG GTAGTTTGTTTTTCGTCTTAAAAACATTAGCAAATGTACCATAAGGGAAG AAATTTTGGCGAGAAGAAATTTTTAATGCAATTTGGCGGAATTTATTTTG GCGATTTAATAGAATTTCTAAGTTTGGCGAGAATTAATTTTGGTAAACGA CCCACTTTTGTTCAATATTTTAGCTGAGAAAAGAGGAAAAAGGGTATTTA CTCTCGGGTACCTAATAGCCGGGGGGTTTGGAATAAGCAGGGGGGTTGGA AAAATTCTCAAAAATTAATAAGCGGGGGGGTTGGAATAAAANNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAA AAATTTCCCAAAAATCAATAAGCGGGGGGGTTGGAATAAGAATGTCCTGG GTGGAAAATTTTCGAAAAATTAATTAGCGGGCCCCCCCGGCTATTAAGTA CCCGAGAGTAGGAGAAATAGAGACTAAATTGAAAGAAAATTAAATATAGC GAGAATTTATTACCTGTAAATTTAAATTCGGCAGAATGAAATGTCGGCGA ATTTGGCAAAATCTTTAGGCAATTCGCCAAAATTTCTTTCAGCCAAAATT TTCCCCCTATGTATGTTGTGTTTTCTGCAGTTTAGACCATGATTGACTAA GAACGACGGTGAATCAGCGGTTTTGCGGTTCAGTTGTTGGTTGTACTCCA TCTTTGGAAGGGTGGATACATAAATTAGCTAATGTCAGAGTTTCTTTGTT ATAGACCTCTTTCATAAATTACCGCATAAGTAACTCGTTCCTCGTAGATA GGTTTCTGCAGTGTGAAAAAAAACTTAACGCTTGTACCCAACCCGCTGCC CACTCGGACCTGAAATCCGTCAACTCCAAGATGACTTACCCGTTTTATAT TTTGGGCACGCCTTTTGATAAACCGCCATATTTTTTTTTAGAATTTGTTC TGCATACGATCCCTGTACAACATGTTGCCAGTGCTATGCTGGTAGAAGCT GTTGAACGTTTCCAGAATAAGGGTGAACAACAGGGGACAAAATGCGTTCC TATTTATCTTAACCGAGATATTTATCGATATGATGGTTTAGGTTCCAAAG GGCAACCGTTGGAAAAATGAATTTATGGAATTTTGTATTATGTACGGGAT TTTGCATTAACCTTATATTATATACCATATTATTTATAATGAAACATCCT GTCCCTTTTTTGAAAACCATATACAAGCCCAGCGGAACAACCGTTAAAGT GGGGAGGCTGAAGGCTCAAAATGAGATAAAATTCACTAGCAATTTGAGGA AAAAAAATCTAATTTGTTCAAAAGTGGGGAAGGCTGAATGCTCTCCAGTC TTCCCGCTTCCGTCGGGCCTGATACAGCTCCTTGATAATGCAAATGACTA AAATATATTGTATTTATAACTTACATGTAAAATTAATTATACATATTCTT TTGTCACACTTTCGCTAATGCCTGTCTCTATTCATTCATTTTAAAAATTG TTTAAACTTATAAATATTTCTAAATACAGAATTCAACAACGATAAAGAAT ATTAACATTTCCATCCACTAGACATCCATTGAACATCCAAATCTTTATTC AGAAAATAAAAACAGTTTCACTACTTCTTTCATAATATCCCTGGCTTTCT GAAGTGCAGCATGGAACAGATCTCTGAAATTGATTGTTTTAGAGGAGTGC GATTAATCGTTAATTGCACTATTACCACTTTTTGCACTCTTCGGCGGGGG GACACTTTTGTCCTCTCCCAAGTTCTGTGTCAGATACTTTTTTTTACTAA TACAATAATGACCGGTTAGTGAGGGCTGTACTGAGAAATATTGCCCGAGG TCAAGTAACGACCGAGCTTGCGAGGTTGTTGCGTTGACCGAGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009131TCONS_00009131Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000090supercontigsc0000090:155890..162133 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
HTATIP2oxidoreductase HTATIP2 isoform a precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
79.01 76.3 48.91 40.74 31.47 25.91 40.88 40.91 37.75 37.61 32.02 29.63 29.53 31.41 40.57 41.41 29.31 31.92 39.41 43.84 17.68 18.64 33.36 29.55 22.91 19.34 12.99 8.87 19.17 20.5