XLOC_005609 (gene) - C. hemisphaerica

Overview
NameXLOC_005609
Unique NameXLOC_005609
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000101:505133..512386+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005609 ID=XLOC_005609|Name=XLOC_005609|organism=Clytia hemisphaerica|type=gene|length=7254bp|location=Sequence derived from alignment at sc0000101:505133..512386+ (Clytia hemisphaerica)
CTCAACTCTCGGTGACATTGGTAAGGTAAGAATCTTTCCAACGCGCAAca ttcttttgaataaaaattttcaaccttttttttgaaattcaaaacttcga ACTAGCATAATAGCTTGTAATTCGAGAGTGAGACAATGTTTTTGGTTCTG TTAGAAaggtattttataaaaagtattcTGTTTATGCTCTTTTTAAGCAA GTGATCAGGAAGCTATGGCCTTAAGCCTAGGACTTTTTTTATTAGCTAGT TTTAACTTATGTACTTACACTTCTCCGCACACCTCTGTGCCATAGTGTCG GTCAGATCCGCCCCGGTAGATAACCCACTGAAAGAAAACACCAAAAAAGG GAAAACCAGACTTGCTTATGCTTGAAAGCATAGACCCTAGTCAGTTTTTG AGACCTCTACCcggtaaaattttacttttcttcATAGAAACCCTGGTGAA TTTCAAAACCTAGTCGGGTCACTGAGACTGGGCTGTTCTTTGTGGCTTCT GAGTGTGTGAAtgcatttttaaagttttcctTTGTGATATCACTCAGTGA CGCGGCATACATTGGCTATATTGTTGTTTAGCGCGTTATTTCGATCTCTT TAGGTTCTCTGTTTACTTGACCTTGAAATGTATCAATGGTCCCTCGTTAT CGATTCCAATTGCGAATGTTTTAGTTGATTCATGATCtttatgatgtaat gttttttacggaaacgccccggtttttgccagtagttaCAAATTTTAAAC AGTTTTTCTCTATCTTacatttgccactactggcgaAAACTGGTATtttc gtagaaaacattacgaaATTAATATCACGAATCCGGTGATATTAACCCTA TCAACTCTTATAGGGGAAATCCGCTTTTGAGGGGTTTGGTAGTGAATTTA CAAGGAAGTGACGTCAAATTTCTTTGTTTGTAAGGATGTCAATACAACGA CTTCAGGGATTTTGACGTCATCACGTCTTCCTAGTAAACTCGAACCCAGC CTCCTTACGCTTTCAAGGTTGATTGGTGTATTCATACCGGGTACGGCAGA TAccagattttaacaaaaaatcccgaaattttccttttcgtcggtaaaat cgcttaaatttcctcttTTGCCGTACCGGatttaaaaagcttccgtcgtg catGACCAGCctcagaccatgttcacacgctACGGTTCCGTTTTTTTCCG GTATggttttcgttacggatcgagtgtgtccatattggtttcggaacgtt tcggagcaagaaaacggagcagttccATTCCTGATGAAAAAGTGGAgtga aaccgtttcgatctgttttgctttgtaatgtcttcttttttgacgtttcg aattttgacgttcacacttgtttcggaaccgttttgtTTCGTAatggaac ggaaccgtaacgtctgagcATGGTCTTATTGCAAACCCTTTCGCAACACa acatttcatcatgaatatgaTTCTGTTGTTTTTTGAGAGATCTGTGTGTG TGTCATCACACAGCTCGTTTTTGAAAGCACAGAGGATCTAAAACATGAGA TAAACATGGTTTCCTTATCTCGTTAAAATCTTGGTCTGTCAATGTCATAG ATTCATTTCATATTGACATGTTTAACTGATATGTTCTGAGTATAttaaca tttttgatttttttggacaaaaaaatgtGGCTTATTTTTGGGGTAAGTTG ATATTTGTAAATCGCGATAAATatccattttgttttgttttgttgttaac ATACCGCAAACCTAGTAGCTTTCAAATTGATTTAAAGCCACCAGCTAAAA AGAATCTACACTTGGAGTACGTGGTTTCCATTATCTCATTACAGTTTTCA TTAAGTcttttcaaaactgaaaatcaGTTCCAATACTGAGGCAAGTAATG TAGCCTAGAAACCACTGAACAcctccaaaattgaaatatcccagacggca cacaacgtcaaatcaacgtccatgtgacattcataacgtccaaataacgt tatttgaacgttaaaacaacgttgtgtgccagctgggatctaATGAAATA AAGTAGAAGTACTAAAATCACAATTCTTgcccgagctttaaattctgcga aaacgttaaaatacccaaaatatctcaaacttGATTCTAATTAAAACTTG TACTCTCTTTTTTTTAACAGGTATCCATTTTTCTGCTCAAACTTCCATCA TGTCAAACCCTCCCAATGTTAGGGTCTTGTTTCGTCAACGGTATCGTCTC ACCTAGCATCTCGCGTGCGAATAGCGTGACTTTTTGTAGCAATGCAGATG GTGGTTCAAGGTAATCTTTGATGTTATTCTTCGGAAATTCATGCAGTGGA GTTAGTCTCTTTAAATCGAACATCtgtaaatttttcattcacAACAATAC CTTATAAATAAACCCCAAgtttccttaattcgaacaaatttgtgtttccc gtgcgtgttcgagttacggagactcCACTGTGTTTCGTTTTGCGTGTATG TAATTATGGATGGTTAAACGGCCTAGTTATTCTCTAGAAATCCGAATTTC TATGGATCAATTCGAATGGATTCTTTGTAAACAGTCTCGTCCCGTGTATC CTGTAtttcaggctttatttacgttactgatggacgcTAGAGATAATTAC CTGGCGTTATCAGTAAGCATCGGAAAGGCGATAATGNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaaaaaaaaca tgtagtacgtacgcactaaggggggaggggggtcttctcaaaagcgtatg cttgcgtacaggggggaggAGGGGTCAAaagaaaatgtacgtacgcagag aaaattttttcatagcctcttttcgcttgttttttgtcgacttttacgct tgttatacgcatcaaggaaaagttgataaacattgagtttcatgtatgaa ataaaggtcggaaccaaacgatttgaattcgaaattttcttcaaccgagg gggggtgaatgaaaaagtacgtaatTACCAGAGGAGGGTATAGCCaattg cgtacagggggagggatTCCtcaattttcgacattttagtgtgtacgtac tatgtggacggcccccgCCCCAGAGAGATAAAGCTCGAATCAAAGGTCGA AAGAATCCTTCTGTAAAACTTTCCATAATTACTGCCTGTACACCTTTTTT TCAGTTTGTTATTTGGTCGCTTTACCGGCAACGACTTTATTGATATATTT TGCCACCGCAATTCGACCGGAGGAATGACGTTGTTCAACATGAACTCCAT CCAGGTGTTGAGTATTGCACGGACTTTCTGTGAAGGAGGGTGGAGATTAA TGACCGCTGATCTCAACGGTGATTCGAACCAAGATTTAGTATGCTTACGA GCGGACGGAAGTGTCAGCTACTTGTTAAACACAGATGGAGGAACATTTTT GACAGGTAATCCACTGAATCCAAACATTTCTGAAGAGTTTTCACCTTTTC GAATGGAAAGTTTGAGCCTTTTAGAATATGAGGTCAGAAAACAAAGTCTC ACAGAAATAGTGCAGTCAAATCTTTTCTACATCCTTGTCTCGTTGATCTG GTGAGAATTTACTAATAGGATATAGAATGAAGGTTCTGGATGCCAATGGG GCTGAATAATGAATTTTATCTTGTGTTTAGTTGGTGGCGGGAACTTCAAA ATTCTATTGTGTACAGTTCAAACTtacaattttaattaaaaaactttGCT ATCTTTCCTGGCGAGGATAGGCCTTGAAAATGGGATTGGATTTTTATCAC CTGGAAGAGTTTTTCAGGATGAAGGGGTCCGATcttttgtgacacagggg tgttttctcTGACTAAAAAAAGTACCCGGACAGAACTTTGACATAGATGT GGgtctttttcagaaattgatcatttcttttatgaaatcggcattttttt ctttcacagcGGCCGAGCAAAATATCAATGCATCGTTTACGTGTAACAAG ACCCTAATATTTGGTGACATCAACGGCGATAACAAAGACGATATTGTTTG TCAAAATGAAGATGGAATCATCCACTTTGCTTTGACTAACTCATCCAATT TAGCAACGGGTTTGTTTACATCACAACAGACATTTCCAACGAGCTGGTGT AATGGAACAATGGATCAAATTATGAAAGGTATTTACTTGGTTTCCCTGTC AACTGACATACCATAATTAGTGTCAAGGGGGCATACCATAATTAGTTGCG ATGGGATAATTTTGAcaacttttcttttatttatcgcgcaatttttcaTA CActaaatatttttccttttaatCCCATGCTAGAGATAAAACTTTATCAA GCCATTCAAGAAAGTACAGTTGGCATTGATTTACCGTAGCCTTACCCCGC GGAAAAtttggtatttctatttttacGTTTTCTTTGTGGGAAAACAATAT GATATGCCAATAAATGCCAGGAATATGACAAAGCAACTGTCAAGTTTGTT TTTCACTGATTGCGAAATGTGAAGCGCGTATAAAGTTTGTTTTCAGTGTC GAAAGTAAGAGTCTGACGTAAAAAAACACTGCTTTTGAACCGTGAATTTA TTCTCTTCATGAAATTAAGCAAAAAAGCAGCTGCTTTTGTGACAGACCCC AGTCCGCTCAAAAATCCAGTAAGAATTCTTTCTGGGATGGCTTTCCCAGT GGATTTCTAACTTTGAAGTTTGAAGAATTTCCGATGACCAGCCTATTTTC TCACCGGGACGATTTCTGGCTGATTTCTTTTCAGTGAGAAAAGAGGGTCC CATGGGGTCTTTCacaaccggttgggaacagtaattttgccggaaaaccg gtttttaggcctacagagccgtctggGCATATATGAACCCTCTTTCTCTT AGGTGACCTGAATGGAGACGGTAAGATTGATCTTTTGTGTCACGCCGAGC GAACTTATTTGAGGAGCGCGCTCATTTCTTCGGGAGCAAGTTTTGAAGAA GAATTATTTGAGATGGAGTTGGAAGTGTGTGGCGATGAAAATCAATTTCT ATTGTAAGTATTGTAAGTTATGATATGTTGTTAACCGTTTACTATTTCGA ATAGGGTTacacgactttttgcgcaatgcaattggttcttttcgcatgac gacgggcctacactgcccagagttgcccgtcgttaggaaaatttattgtg acgtcactttttcaaaggaaaatgaacaacgCGTTGatatcatttctctc atttttttatttcctcGGTCAaagcaacaacctcgcaagcttggtcgtta cttgaccttgGGCAATATTTCTCTGCCCTccctaaccggtcattattgta ttaataacattagcagaaaaaaaacatcatctTTTTAACGAACAATTTCA GCCTCTGGTTCTTTAAACAATATGTCTGGGAAAGAcgactgaaaaaaata aagatttgtgTGAATTTCtgacatgaaaaatgaaaacaaatgatgtcaac gtagtgttcattttctttgaaaataattggcgtcacaatgaattttctta ACAACGGGCACATCGTGCTATGTAAGCCCGTCGTCATGTGAAAAGAACCA ATCGCGTTGCGTAAAAACTCGCACAGCCCgcacaaaaaataacaataatt aataatataatttttagcagattaagaataattttttttccaaaacttca CCTACACCTATATTCACCTACATTTATAGTCAACAAGCTAACGGTCAAAT TTGGATCAATGACCTCCTTACCGGAcataatatttacaaaaatattctaa attcTATGTCAAATAGAAGTTTCCATTTCAACAAAGTCCACCACTTTTAA ACCAAAATAGCCCAAATTATATCATCAATAGCTATCATTTCCCGCCAAGT TTTCTCCATAACTCAACTGGAATAATTATTACTTTCCCTTGTCGTTCGAG TTGTTAGACTCAACTTTATTTATCACGGAGACTTACCATAGTTTTGCATA CATAAGATTTCTTTTCCCAAGATTCTCCAGCCACTTTTCTACTGGAAAAA GACCAGAACTCCGGGTAGCTGAGAAATGATcttcggaaagttaggcagtt tcgtgagtaaacacaagattttccgtacctttagaagaaaatcctttcca atctcatgccggtTATCCCGGGAAAAATACGTGGAAAAAACCCCGGAATA GTGGCAAATCAATCTTAATGCGAGAATtggaatcttatgcaaaacgacgg cacgcgtttttttataagaacaaactatataagaacataaggcttcgcag actagaaaacacccaatttcttagaaaaattgacaaaaatagtcaaaaaa tgaattgtttgaatgttcttataaagaaaacgtatATTCTACTGTCATTT TTTAGAGTTCGTGATATCAACGGTGACGGATACGCTGATCTGGTCTGTAA ATCTTCCGACCTCACTGGTACCACTAAAATCATCCATAACAAGCCTGGtg aatattttacagaccagtctgtaCGCAATGAGTTCCGTTTTTGTGTAAAT GGTGGACCGACAAATTTTTATGTGGAAGATGTGAACAGGGATGGCTTTGA TGATTTGGTTTGTCAGACCAGCATCGCAAAAAGATATATCTTCATCAGTC GATGCTACTTTTAAAATCTAACACTTCTATCAATATAAACATTTGAAAGa cttaaaatttcgaaaagtaATACAGTCCCAAAAATTGGTTTCTCTCTTTG ATATGAAGtgaattttaaaagttgaaCCTTTTGGAAAGGGAATATATAAA CTTAAATTGATGGGTTGTTTATCGATTGGGCCATTACATCAAATGTTACG ATTCTGCAGTTACATTGGTTTCTTTGCTCACTGAGAAGTCATTTTGATCA Taat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009998TCONS_00009998Clytia hemisphaericatranscript
TCONS_00009999TCONS_00009999Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009998-proteinTCONS_00009998-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000101supercontigsc0000101:505133..512386 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.41 3.28 4.96 5.69 0.4 0.53 1.79 1.35 1.67 2.18 1.04 1.25 1.25 2.01 0.66 0.8 1.19 1.41 0.25 0.16 4.65 3.83 471.03 422.13 22.37 8.72 246.06 331.18 3818.96 3681.26