XLOC_005774 (gene) - C. hemisphaerica

Overview
NameXLOC_005774
Unique NameXLOC_005774
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000104:536796..542247+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005774 ID=XLOC_005774|Name=XLOC_005774|organism=Clytia hemisphaerica|type=gene|length=5452bp|location=Sequence derived from alignment at sc0000104:536796..542247+ (Clytia hemisphaerica)
caaattttgactttgtttttagAAATCACCAATCACAGTAAATGGCAAAA ATCCCTTTATTAAGGTATGAATGAAACACAAAACCAAgtaaaatgtcttt aaaaataactgaaaaaaaatagctaaaatgacTGAATTATGTAAATATAT TTAAAGTTTACCCTGTCTAGGTATAAAAGTGTGTGAATGTGAAAACAAGC TAACGGACTTTGCCAACTATAACAGACTTacaaaaaaacctaaaaattga attatcaGTAAACATTATCagtaaaaagattttgttgCTAGTAATTAACA ATGAACAGTTTTATTGTCCTCCAGGTTTTTAGATGAATTAAGGCCTGAGA GCgtatgaaacaaaataaaataataaattcacCAGCCAATACTTTTGTCA CCATGCGATTTCTTTGTCACTTTTTGTCAACAAACTTTCTACCAGTAAGG TATGTAAAAGTATTATTGAAGTGGGGCAAACTAAATTTGTTCATATAGCA TTCGGTATTAATTCTGATATAAATGTTTTCATTGTGATAAAAACTGTCTC AAAAGCTCTAGGGGCAGAATCACAATAGATGTCAGAGGATCAACATGCCA CAAACATGAGCTGAAAAAAGTGATCAGCTGGCTCCATTTAACTTGTTCTA TGAAATCGAAAGGTTGATGTGTTTGAGGTGGTTCATAATATTTACACAAA CCACATTCAAActcttttgaagaaaaatctAACATCTCTTTTTCATTCAA GATTGAAAGTTTGTAGCGAATGTAATTGGATGCATCAGTGTCACAAATCT TGTTTTCAAGCTTTGATGTCAGCGCTTTCAGCAAGTTAAGAGATTCTTCA TCCCCAGTGATTCGATACAAAAGATAAGCACCGAAAAATGGTGGATAAAA TCTGACTGCACCATGTATGTGGATTTCTTCGAAAACTCCTCGCAACAGCT CATCTGACTGCAGGAAATTTGGACATCCCAAAATAGTATCACTGACAAAA AGAATAGGAACTGAAACAAATTTTggcttcaaatttttcactgcAATGTC TAcaaattgttttaaaatgtGCTCACTTTTGCCTTCATTTCCTACCACGT AGTAATACAAAGCAAGATAAATTGCACCACTAACACAATTATCGTTCAAT GGTTCAGGAAGCTCTACCTGGGAAAGAAACAAATTTTCCATATCCACCCA TAACTTCCTGGTATCTTCTGCACTTCTATAATAATCTGGATCAAAATATC TTGTCAATGCCGTCAATACTAGCCATCGAATCACGGTAATTTTTGCAAAT CGCTGCAAGATGGGATCATTGGTCAGGAATTGTAGGGCTTTCATGACATT GTTAGTCTCTTGTGACCTATGCAAGGGGATATCATTCTTCCAATACAAGG TCTGGTGCCTATTTAGCGCAGATCTCAAGAATTCAAGCATGTAGACATGA GCATGTTGATAAAACTTATTACTAATGAATGTTTCTTTATCCTcattatt gaatttttcaacaaagcCATTTTCTAAGATAGAGCACAAGACACTATTCA AAAGCTGTGCATCTCCTATTTTGACCTGTACTTTATAGATGGAAATAAAC ACATTCATTTCTTCAATACTGAGAAAGTTACATGCCAATATCTTTCCAAA CAAATCCTTGCGAACATTGTCAATTTTCGAGACAAGTTTTTTGGCATCTT CTTGTGGGTAATGGTCAATCATATGATTCTCTGGTATGAAATAATTAGGG CAgcacttttttaaaagatataCTTTCATGGTTTCTAATATCTCATCTAC TAGTTCAATTGTAGTGTGTTTCTCCCAAAAATCTATTGGATTCTTCTCGT TCATCCAGAAAATAATAGTCTTAGCAAAATAGGAGCAGAGGCCCTTCTCA TTTTTGTTATCCCCTTGCAAATGGTTTTTGAACAGTTCTTTACACAAGAA ATAGCATTTGAATTGTATAATACCCCACTTTTGAATCAATTGTTTTTCTA TGAGTGAGAAAGAAAACCTGAACTCTATATCAGGGTTCTCACTTTGGGCA TGGGCTACAGGAACAACATGGCAATCACTATTAAGAATCATAGGAACCTG TTGCTGAAAACTGGGATGAAATTCTTTGTTGTCAAATCTCTTTTGTACAA CATTATTAGATAGCATTTGGTAGCATTGCACCATATCTGTTTCTTTATTA TCTGGTTTTGGAGTAATCATGAAAGCTGGTCCGTGTGGGATACCAATCCC AAAATCATGTATATGTTGTGTTTGGTTAAAGGCTTTCATGCGATCCaagt ataattttccattcaaacttgcatagccattaaaccttttgtcagCGCAT TTCTGATGTACTAGCAATCTTGTATAGCCAGCATGGCAAAAATCTTGATC AAGAACCAATACTCCATCCTTATAATTCTTTGGAATATCACTAGCTGATT CTACAATGATGAACCTTTTGTCGATATACATAATATCATAATCTCCATGA TTGGTAATACCTTCAGCAAAGCTTCCAGAATAAATAGTGTCAATTCTATC ACCACATTGGTATTCACAATGAAACACAGTAACTAGGTTGTCAAAGAGAT AACAAACTTCACGAATCTTTTCAATGACAACAAAGTCCAACATataattg acaatttcatttttaatttctttaagCTTCATTTCCTATGTTTTTAACAA TAGTTACATAGAAAAGAAAAGTATCACataaaaaaaagatgaaaatcaat aaaaaataaacttagtttaaaattgcaccaaaatttgataaatgcaACTG TTTTGATAGTAATCAGTGTTAGGCAAATTTAGTTCAGAAGATAAAATAAT TGACAATTATCTTCCATGtttaaatcttatttttattttgttttctgttt ttgaCCTTAAAATAACTAAGTCCCTTTGACCCTACTATATTGTTGGGctt ctgggggtaaaaagtatATACCAATTTGTCTTTTTCCATTTAAACATATT TAAACATATTACATCTGACATGACAAACTTGAGGAGAAAGGGAAAGTCCA ACAAGAAGACTTATCAGATCAAAGAAGCAGTTATTTTTGCTTTCTACAGT TTGGTCCCATATTTTACCCCAANCTTTTCAGCAAGTTAATAGATTCTTCA TCCCCAGTGATTCGATACAAAAGATAAGCACCGAAGAATGGTGGATAAAA TCTGACTGCACCATGTATGTGGATTTCTTCGAAAACTCCTCGCAACAGCT CATCTGACTGCAGGAAATTTGGACATTCCAAAATAGTATCACTGACAAAA AGAATAGGAACTGAAACAAATTTTGGCTTCAAATTTCTCACTGCAATGTC TAcaaattgttttaaaatgtGCTCACTTTTGCCTTCATTTCCTACCACGT AGTAATACAAAGCCAGATAAATTGCACCACTAACACAATTATCGTTCAAT GGTTCAGGAAGCTCTACCTGGGAAAGAAACAAATTTTCCATATCCACCCA TAACTTNAAAACACAAAACCAAgtaaaatgtctttaaaaataactgaaaa aaaaatagctaaaatgacTGAATTATGTAAATATATTTAAAGTTTACCCT GTCTAGGTATAAAAGTGTGTGAATGTGAAAACAAGCTAACGGACTTTGCC AACTATAACAGACTTacaaaaaaacctaaaaattgaattatcaGTAAACA TTATCagtaaaaagattttgttgCTAGTAATTAACAATGAACAGTTTTAT TGTCCTCCAGGTTTTTAGATGAATTAAGGCCTGAGAGCgtatgaaacaaa ataaaataataaattcacCAGCCAATACTTTTGTCACCATGCGATTTCTT TGTCACTTTTTGTCAACAAACTTTCTACCAGTAAGGTATGNAGGTGCCTA TTTAGCGCAGATCTCAAGAATTCAAGCATGTAGACATGAGCATGTTGATA AAACTTATTACTAATGCATGTTTCTTTATCCTcattattgaatttttcaa caaagcCATTTTCTAAGATAGAGCACAAGACACTATTCAAAAGCTGTGTA TCTCCTATTTTGACCTGTACTTTATAGATGGAAATAAACACATTCATTTC TTCAATACTGAGAAAGTTACATGCCAATATCTTTCCAAACAAATCCTTGC GAACATTGTCAATTTTCGAGGCAAGTTTTTTGGCATCTTCTTGTGGGTAA TGGTCAATCATATGATTCTCTGGTATGAAATAATTAGGGCAgcacttttt taaaagatataCTTTCATGGTTTCTAATATCTCATCTACTAGTTCAATTG TAGTGTGTTTCTCCCAAAAACCTATTGGATTCTTCTCGTTCATCCAGAAA ATAATAGTCTTAGCAAAATAGGAGCAGAGGCCCTTCTCATTTTCGTTATC CCCTTGCAAATGGTTTTTGAACAGTTCTTTACACAAGAAATAGCATTTGA ATTGTATAATACCCCACTTTTGAATCAATTGTTTTTCTATGAGTGAGAAA GAAAACCTGAACTCTATATCAGGGTTCTCACTTTGGGCATGGGCTACAGG AACAACATGGCAATCACTATTAAGAATCATAGGAACCTGTTGCTGAAAAC TGGGATGAAATTCTTTGTTGTCAAATCTCTTTTGTACAACATTATTAGAT AGCATTTGGTAGCATTGCACCATATCTGTTTCTTTATTGTCTGGTTTTGG AGTAATCATGAAAGCCGGTCCGTGTGGGATACCAATCCCAAAATCATGTA TATGTTGTGTTTGGTTAAAGGCTTTCATACGATCCaagtataattttcca ttcaaacttgcatagccattaaaccttttgtcagCGCATTTCTGATGTAC TAGCAATCTTGTATAGCCAGCATGGCAAAAATCTTGATCAAGAACCAATA CTCCATCCTTATAATTCTTTGGAATATCACTAGCTGATTCTACAATGATG AACCTTTTGTCGATATACATAATATCATAATCTCCATGATTGGTAATACC TTCAGCAAAGCTTCCAGAATAAATAGTGTCAATTCTATCACCACATTGGT ATTCACAATGAAACACAGTAACTAGGTTGTCAAAGAGATAACAAACTTCA CGAATCTTTTCAATGACAACAAAGTCCAACATataattgacaatttcatt tttaatttctttaagCTTCATTTCCTATGTTTTTAACAATAGTTACATAG AAAAGAAAAGTATCACataaaaaaaagatgaaaatcaataaaaaataaac ttagtttaaaattgcaccaaaatttgataaatgcaACTGTTTTGATAGTA ATCAGTGTTAGGCAAATTTAGTTGAGAAGATAAAGTAATTGACAATTATC TTCCATGtttaaatcttatttttattttgttttctgtttttgaccttaaa aacttaaaataactAAGTTCCTTTGATCCTACTACATTGTTGGGcttctg gg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010267TCONS_00010267Clytia hemisphaericatranscript
TCONS_00010268TCONS_00010268Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104supercontigsc0000104:536796..542247 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.66 1.69 0.38 1.01 3.34 1.54 1.69 2.41 1.17 1.16 0.87 0.64 0.97 0.56 1.29 1.51 1.27 1.7 0.81 1.35 0.63 0.52 1.23 1.54 0.59 1.43 1.36 0.7 0.81 0.35