XLOC_005904 (gene) - C. hemisphaerica

Overview
NameXLOC_005904
Unique NameXLOC_005904
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000107:356897..362306+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005904 ID=XLOC_005904|Name=XLOC_005904|organism=Clytia hemisphaerica|type=gene|length=5410bp|location=Sequence derived from alignment at sc0000107:356897..362306+ (Clytia hemisphaerica)
ATAAATTGGGCACGAATCTTTCTGCAGAATCACAatcatatttttgattt tttcatcatGATGTTGAAATTGGTATTGTGTGTAGCAGTTCTAGTTGCAG CAACATGTAAGTATCTTAATACCTTCGAAATTCTAAAAGCTTTTTGCtat taaattttaaactttaCTGAAAAGATTTCTAATAAATTTCTGTAACCACA AATTctattgaataatttttttctaatttagaTGCTTGCAAGGATGGTCA CAGCTCGTGCCCTCGTTGGACAAAGTACTGTAGCTCCAACTCATACGTCA AAAAATACTGTCTGAAATCTTGCGGTAAATGCAGCCAAACTGCTGCGCCA CCAACCCAAGCTCCACCAACCAGCGGTGGTAGCTCAAGCTATGGAGAGTN TGCGGTAAATGCAGCCAAACTGCTGCGCCACCAACCCAAGCTCCACCAAC CAGCGGTGGCAGCTCAAGCTATGGAGAGTGTGGTGTCACCCCAGTCCCAC AAAGTCGAATTGTCAACGGTGATGAAGCTAAAGAAGGAGCTTGGCCATGG ATTGTCTCTCTTCAAACTTCGGGTGGATTTCATTTCTGTGGTGGCTCAAT CTTGACACCAACTTGGGTAAGATGATATATCTTTATTAAGTGTCGCATCC TTAAATATCTTTAGAACTAAAGAAGTTTCCCAGTCCTTACGCCTTCTTTG TctcaaagaaaattaatttaGCCTTTCAATGATGGTGTCATTTTATCCAA AAACGCTAAaactaaaatataaatattttcaacttttgaagGGGGTTCTC TTTTTGCTTTCAATCTTATCCTTTAGTATCCAAAGGGCTTTCGATGCGCA AGCCAAAACATAGCCGGCGTCTGCGACGACAGGGACCGTCTAGTTAAGTG CTATTTCAGTAATCTACCGAGATATAGCCAGAGAAAATTCTCTTAAACGA AGATAAAGCAATCTTACATCGGTACGGACATGATTCTAAAGCCCATTCGT TTTAAGTGTGCATTCTGTTTCACTATCCTGATTTTACTGGTTTTTATGCG TGCAATAATCGTTCAGAATCGTTATGTAtaaacattattttttctttaac agattttGACTGCAAGCCATTGCGTTGACAGCCGCAAGAACTCACCAACA AGCATGAGAGTCATTGCTGGTGCACATAACATCAAATCTAGAGAAGGaac tcaacaaaaaatgacaCCAAAACGAATTATCATGCATCAAAGCTATGGCG TTGGTGGTTTTTTAAATGCTGACATTGCACTTATTGAGTTGTCATCACCT TTACGATTGAATGATCGTGTTGTCAGAGCTTGTGTTCCTCAACAAGGAGT CTACCCTAAAGTTGGAACAAAATGTTATATCGCCGGTAAGATTGGTTTTC TTGGTTTTACGATTTGAGGTTTCGGAGAAGAAAGAAAACTTTCTGAATTT AAGCCTTTAAATAGGTTTCAGTTTTCTCTGAACTGTCTaaagttcttgaa aaatttcaaggttAGGAAGAATATGAAGCTATAACTATCCAAAAATTGTC CCTGAGTAAATGAACTTCCTCATTTGAATCTGATCTCAATCAATCAGTTA GCTGGCTGTTTCCGTAACTGAGAAGCAACATTAGCTTAACCTTTATGTCC AGGGGGTACCCCTTGTACCACCCTCACTTGCGGTGAAGCCAACACTACGC AACCTGTTTGCCAAAGACCCGTGGTTGAGCCAATAGTTGCAGAAGTTGCA GAGTAATGAGTGGTACTCAGTGGGAATCTGTTGTTAATATAAAATAACCA TCTGAATCTTGGATatgttattttatttcattcagGCTGGGGAAGAATTT CATACAATCCAAGAAGGTCACCTGAAAAACTTCAACAAGCAAAACTCCCA ATTATGAACAACAAAGGTAAAGAACAAGTTATCGCTGGTCATGGTGTCCG AGGAAAAGCCAATGCTTGCCAAGGAGATTCTGGTGGTCCATTGATGTGTT TGAAATCTGATGGAAAATCATGGCAAGTCGAAGGTGCTGCAAGTTATGTC TACCGTGGATGTTATGGTATTAGCGCTTACTCCCCACTCAATAAATATTT GAGCTGGGTTAAACGATATGTTCCAAACTTGTaatttatataatatatac atTGAAGGTCATTAAAAGATTAATTtatgaatgaaaaatatatatttttt gaatttgaatgttatTTGCTTATTATTTTCCAAGTTCCACCAGTAGCGTC TGGCTTAGCAACACCCTAAACTGCCATTTAACGCTGCctaagaaacaaaa attatagATAAAATTATGGTTTGGTagaattcaattcaaaaaattcattt ttatttaatacAAATAGGTAATTTTCCACCCTAAATGATCATAAAATTTG ATCAGGTTGTTGTTAATATTGATACTTTTATTAAATACGATTGAAATTTG TAGTGAAAAATTAGGCTTTTAACAAGAATATTTGAATAATATTTTGCGTA GCTGTACAAAGttgtattcaatttcaattgCACTATAAAAGCGGAAACGC TATTAGGATTTTATGAAtcattttttttcgtttaaaaTCACCACGAGGAT GTTACGATTGGTATTGGCATTTACGTTTCTTACCAGCGTAGCATGTAAGT ATCACTCATTTAAAATTTTCCTCGACATTTGCCAATCTTTATGCCGTACT TTACACCAGCTTCTTTGTAATAGCTGCAAtcatggtcataatatttgaga aaaaagggaaatttctaACACAAACGATTTAGAAGCGCTTTAAATTatgt tggaagggtagagttttaactctgagttttaatgctagacttaagaaaag ttcaagaatggtccaatagggctcagaatttATCAATTAGATCATGTTTG CAagtgacggttccgtttcgctccgaaacagaatgaagccattctattgg ttagaagtgacgtaacacttgaatttaaccaatagaatggcttcatttcg ttgcggagcgaaacggaaccgtcacgtgcgagTCTTAGCCCAGAAGCGAC TTTCTCGctcgaactccaaatttcgaaaagcgAGGAAATAAGTTacattc tcaatagattttgaccatgattgtggTGTTTGTTTTTCTTAACCAAGTGT AAACCCATTGGTCACTCTACATATGGTCTAGATTCTATGGTACTAGCAAT TAGATAGATTCActtgttttagtttttttaatttttgtttttcaaacaat ttcttAGTTTTATGTACAATTTACCCATCAACTGACAATAGGTCAATGTG GTGTATCCAAGGTCTCACAAAGTCGAGTTGTGAATGGAGTTGACGCAAAA GAAGGAGCTTGGCCATGGATTGTCTCATTGCAAACTTCCAGTGGATTTCA TTTCTGCGGTGGCTCAATCTTGACACCAAACTGGGTGAGCTAAGTTTTCC TTCCTATTTTGATCTTTTGAATAACAATAGGTACATTTATAGGTAAAGGG CCTGATATATTCTAGAGAAAGTTATAAAAAAGTCGATGTTAGACCAAAGT AAAATCTAACTTcgaaaaacctaaaaacaattcaattttcTGCAATAAAT ATCAATGAaacaaaaagctaagaacactCCCATATAAGCAACCTTTAAAA TTAAAGCCACAGATGTATCTATTCTTTAGATTCTAACAGCCAGTCATTGT GTGGCAAGTCGTAAGAACACACCGAGACAATTGAATGTAGTTGCTGGTGC ACATAATATCAAGATCAAGGAAGCAAGCCAACAAAAAATTGCAGCCAAAC GAATTATCATGCATCCTCATTATGATAATGACGGACACTTGCATGCTGAC ATTGCGCTTATTGAGTTGTCATCACCTTTACGATTGAATAGTCGTGTTGT CAGAGCTTGCGTTCCTCAACAAGGAATTCACCCTAAAGTTGATGCTGAAT GTTTTGTTGCAGGTATCGCTATATAATTAAAGTTATTTATAAGTATATTT TGCTTTTACTTCATTGACAGCGTTGCATGCTTAAATATACATGTTCCAGT GGCCGTTGCATGAAGGTAGATCATCCAGCTACGGAGCGCTAGGGTCATAC TAAAGactcccaaaatggtacttgatgcctctctgcttgatgatCAGTAA CTACAATGACGGATCAAGAGTACGGAAGAAATCCCGGGAGGgaagtggcg ccctccccttcCTTTGGATTGAAAAGGAAGCCTTCCGTTCGGCCTTCTAC TACGTTTGAAAATTTAACTTGCACTACATAAAGAGTACAGTAGATTGAAG TCGTAGAAATGGCTGAAATCGcatttttctattcattttctctatttttc tcttcttttttttcgactTGAGGTTGGGGAAGAATTCAGTTCGATCCAAA AAAATCACCAGAAAAGCTTCAACAAGCAAAATTACCCATCATGCACCGTC CTGACCGCGAACAAGTTATGGCTGGTTATGGCATCAGCTCCAAAGGAAAA GCCAATGCTTGCCAAGGAGATTCTGGTGGTCCATTGATGTGTTTGAAATC TGATGGAAAATCATGGCAAGTTGAAGGTGCTGCAAGCTGGGTATACAGAG GATGTCATTCTGTTAGTGCGTTTTCGCCACTCAATAAATATTTGAGCTGG GTCAAACAGTATGTTAGTGATTTGTAAATTctgtttatttatttggattt aaACAAAATACAAATCAACTTCatgatgttcatgacgtaatgttttttac GAAAGCACCCAAAATAGTCCGGGCGCTAACCACTATTGgcaaaattagtg gcaaacacTCGGTTTTCAATTGTTTATCNGACGGATCAAGAGTACGGAAG AAATCCCGGGAGGgaagtggcgccctccccttcCTTTGGATTGAAAAGGA AGCCTTCCGTTCGGCCTTCTATACTACGTTTGAAAATTTAACTTGCACTA CATAAAGAGTACAGTAGATTGAAGTCGTAGAAATGGCTGAAATCGCATTT TTCTATTCATCTTCtctatttttctcttcttttttttcgactTGAGGTTG GGGAAGAATTCAGTTCGATCCAAAAAAATCACCAGAAAAGCTTCAACAAG CAAAATTACCCATCATGCACCGTCCTGACCGCGAACAAGTTATGGCTGGT TATGGCATCAGCTCCAAAGGAAAAGCCAATGCTTGCCAAGGAGATTCTGG TGGTCCATTGATGTGTTTGAAATCTGATGGAAAATCATGGCAAGTTGAAG GTGCTGCAAGCTGGGTATACAGAGGATGTCATTCTGTTAGTGCGTTTTCG CCACTCAATAAATATTTGAGCTGGGTCAAACAGTATGTTAGTGATTTGTA AATTctgtttatttatttggatttaaACAAAATACAAATCAACTTCatga tgttcatgac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010523TCONS_00010523Clytia hemisphaericatranscript
TCONS_00010524TCONS_00010524Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00010524-proteinTCONS_00010524-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000107supercontigsc0000107:356897..362306 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.53 0.43 0.15 0.06 0.53 0.42 0.39 0.45 0.19 0.31 0.29 0.12 160.25 158.39 54.61 101.24 97.97 91.52 417.13 401.79 351.12 391.57 361.42 443.77 427.82 494.04 0.02 0.1 0.22 0.26