XLOC_006645 (gene) - C. hemisphaerica

Overview
NameXLOC_006645
Unique NameXLOC_006645
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000133:183880..191877+

Legend: transcript
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006645 ID=XLOC_006645|Name=XLOC_006645|organism=Clytia hemisphaerica|type=gene|length=7998bp|location=Sequence derived from alignment at sc0000133:183880..191877+ (Clytia hemisphaerica)
ATTTGTTTCTCCATAGCAAAATAATATTATTATTAAAAGTataaatataa
aagaatatGGATGTCGATTTGTAGTGTCAGAAAGTGAAAATGCAGCAGTC
AACACTAGGTAAGAAATGTTTCAATCATACATTCTCTCTGGTGGTTCAGT
ATCTAAAAAATTTCCTTGTTAAAGTTTTGTAATCTTTTGTCCTTGACAAT
AAAATTCTACAATTATCTGCGCGTGTGCATAATAGTCATTGGACCTACGG
TCTACTCATATAAAGATGCTTCACTGCTCAAAAATTctgttcaaaaatat
tttggtattttgtactttttttgatttttacattttaaattaCTAGTCTT
GAAGGAGAAAGAAATATCttgttgaaaatataattttgagtgTTTTCGAA
TTGTGATAATTTTTCTCTTCTTCATCTTGCATCTCCAtcttaatatttaa
aaaaaattcttcaagacACCTCATTCTACTCAAGATTATCTTTCCTTGGG
AAATTTACTACATAAAGTATTCTTGTGTTTATCTTGACTaaatgtttttt
atcttttcaatcaGGTATTGAAAAAAGAGAGCACCAGACAGGAAGCGTTC
ACCACCTGGATGTTGAGCCTGTTCTTTTCcataacaaaaagaaacaaaag
aaagaccaACTATTACAAGATCGTTCAAGCGTTCACAATGATGATGATAC
TCTACGAATGATCGATAATGAACTGGCAAAAGCTAGTAAGTACCAAGGAA
GTTTAATCTTTTATTTAAGTTTCTTGTAAGTACTGACTTAccatttttta
aatacagtTTTTTAAAACACTTTCAGTCCCATTGTTTATTGTCTTTGGGG
CACTGCtgcttttttaagttttactCTTGCactaaaatgttttttaatca
TGACACTCAGTAATTAGAGAACACATATAGGTTAGCCCAAGGGTAGCCAG
AAATGCTCGGAACCCCATTCAACTCTATGCAATCCCTCGAAACAATACGG
GTTAAATATTTCTGACTTAAATATATAGGTTATATGGTTAGTTTCGTAGG
AAGGTATCGCGTTGGAGGGCCTGTGTTGCCCATTTGTTTTAAGTGTCTAT
TAATGTTTGCTTTGCTTGTGAATTTTCAACCAATACTTCAAATCTAGCAA
ActatataccgttgaaaaggTAATTTAGAGTACTTCGAAACTTTGagaga
aatgaaaaagaaaaaaggaaactttttaTCTTTATGCGCGAGGAGCCTGC
TGCTTAGACGACTTGCGTCAAAAGTGACAGCCTCTAGAAAGTAGCTCGTT
GGAGTTGAAAAAATCTTCGGTGTGttttttgacgacatttttaGCCTAGC
GTAGAAcgatcttttcaacggtatataatTTGCTAGAATTAAAGCATTGG
TTGAAAATgacaagtaaaaagaaaatcagTGCACACTTAAAAAGAATGGA
CTTTTAGAACTTTTAGAACAACTTTTAGAAGACTTAACATTGAACTTGGA
GGGGGAGGTTAGCACAGTCgactctttctaattcgatctcaaaggaacca
aaaattatctttgaattagagaaatattcgaattaaagagagtaaTTTAT
ATCACTCTCCAGCCGacgggaccaatattttagttcgaattacagaaaga
ttcgaatgatgGATGTTCGAATTAGAGTGAGATGACTGTATTGGTTCATC
ATTCTATTGAAAACCtgtacaggggggtggacgaacctgcCAAAAAATTC
CCAGTTGTTCAAAGACCTTTTCACCTAGAAAAACTCCTACTTAACTCTCA
GTTATTTCGTCTGTAATCCATTCGCTAGGCTCATTACCGTCCGTCCTTGA
CGCTCGATTCCCAACATGATAGATACTTTAGTTGATGATCATATCTCGAA
TGATGACCTAGTCTTGGCCTCGttgaaagatattttcataTGTGACAAGT
CTAGTTAGTATCAGTTATTTTAAAATCATTCTCCTTATAGTGTTACCAGA
CGCTGAGGTGAGAATCTGTGGATGCAAAGAAGGTACATTTCGTATCATCA
GTGGTTTGATCTTGGTCGTCCTGATCGCCGTCTCATGGACCGGTTTCACG
CAATTCGGACGTAGTGTATACGACAAGGACTTCAAATCGCCGTACTTCAC
CGCTTGGTTTTCTATCTGTTTTCAAGTTTCAATGTATCCTATATTCATGG
TGCCACTCATGTGTCAGAAAACTCCGTTCCGAATTCGAACTTTCTTGAGG
TAATAGACTGAGTTTTTATTAAATTATGATATCTATCAACTCCTGTCTGA
TGtatttctttcatattttcatcGGTCCAGCTGATTTTAATAAAGGTTTT
AAAAAGGTCCTTGTTAGTTTTATTGCTATGCTATGAATTGCTTTATAAAG
TGAAAAATCTCAAAGATTTTTCATCAATATGTTCCTTGAAAACGTATCTT
GAGAACTTAATCAGGACTTTCCTTTTTCGGTTATCAAGGTTTCATAATTT
GACAATAAAGCAGCGAGATGCTTGATAAATGGAATCTTTTACCACCCNCC
tgtacaggggggtggacgaacctgcCAAAAAATTCCCAGTTGTTCAAAGA
CCTTTTCACCTAGAAAAACTCCTACTTAACTCTCAGTTATTTCGTCTGTA
ATCCATTCGCTAGGCTCATTACCGTCCGTCCTTGACGCTCGATTCCCAAC
ATGATAGATACTTTAGTTGATGATCATATCTCGAATGATGACCTAGTCTT
GGCCTCGttgaaagatattttcataTGTGACAAGTCTAGTTAGTATCAGT
TATTTTAAAATCATTCTCCTTATAGTGTTACCAGACGCTGAGGTGAGAAT
CTGTGGATGCAAAGAAGGTACATTTCGTATCATCAGTGGTTTGATCTTGG
TCGTCCTGATCGCCGTCTCATGGACCGGTTTCACGCAATTCGGACGTAGT
GTATACGACAAGGACTTCAAATCGCCGTACTTCACCGCTTGGTTTTCTAT
CTGTTTTCAAGTTTCAATGTATCCTATATTCATGGTGCCACTCATGTGTC
AGAAAACTCCGTTCCGAATTCGAACTTTCTTGAGGTAATAGACTGAGTTT
TTATTAAATTATGATATCTATCAACTCCTGTCTGATGtatttctttcata
ttttcatcGGTCCAGCTGATTTTAATAAAGGTTTTAAAAAGGTCCTTGTT
AGTTTTATTGCTATGCTATGAATTGCTTTATAAAGTGAAAAATCTCAAAG
ATTTTTCATCAATATGTTCCTTGAAAACGTATCTTGAGAACTTAATCAGG
ACTTTCCTTTTTCGGTTATCAAGGTTTCATAATTTGACAATAAAGCAGCG
AGATGCTTGATAAATGGAATCTTttaccaccccccccccccccccNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCcccccccccggtaattaggtcccccttTTTTATAAGGCACCTG
ACAATAACgattttttcattattattttctATACAGACAAACAGCAGAAA
TATTCGGTACCAGGGGGTTTTGTTTACGGAGCGTGGTCGTCTTCTTGCTC
CGCTATTCCATTCCGTTCACTGCGATCAACTTAATGTGGAATTATTTCTA
TTATCGATCATTGAAAGAACTGAATGCAGGTGTAGTGGCGACAGTATTTG
CATCTCAAAGCACCTTTGTTTATATCTTATCActgatatttttgaaagat
aAATTCTTCATATTGAGGGTAAGTAAAtaacgtcacgaacatcacttgcc
tcgtattcaaacaattaccatggtgatgaTGTCCCTTAAGacatgaaatg
atttttttatgaatagaaatgAGTAGTTTAtgagtagttttaataaaatt
ccgctgggagttaataaccatggcaataatttcaaaacgaaggtaagtga
tgttcgtaacgtaatttatgaaaagctcTATTCAGGGTCAACTTTTTGTC
GAACATTACGTTGAAATACGGAcatttaaaatttctaaaaggtGTCGTTT
TGAGATTTTGGAAAGAACTTCCATGTGATTGCGTTCTCGAAAATACGTCA
CAGGTCCTAAGGTTTGGGTCCCTTACTATGATAAGTTTGAAGAAAATCTA
TTTCGACGTAGATGAAACATTCTTTGATATTTTAGCATTGATTTTAACAA
GTCAAGATTTTAAAAGCCCTGTAACGCaataattcattttttcaaataac
AAGAAAGAGACTTTGATTTATTGTTTAGAACTTTAAGTTTTATGCCGCCC
GTATGACAATTATCAGCTAAAATCTTCATACAATATTCATTTCTTTCATT
CTTCAGATGAGCTCGGTATTATTATCACTGGGTGGTATCATATTGATGGG
TCATGGCGAAGGTTTTGACAATCCTCACACCCTTGGTATTCTATTTGCCG
CCCTCGCCGCCTTAATGGCTGCTATTTATCAGGTGAGAAGCGTCTTTTGa
tatgtatttttttgttttttaacctCGTGGAAGGTTTTTGCTagttttta
tttctgtttttttcttcCTATCAAAATGTGGATGTTGTTACAGTAAAGGC
TCGgagacacgagaagtttttttcgtcTTGGTTGCAattcaacatgctcc
atcccaccaacctgaaacgctttctcgcgtctccaccccatttttcattt
aaataacatttgtgcttctctcacttttgtcccaggaacaaaaaaagaaa
ccatgagtagggtagatcgtcaaatggcaaagtcaaaaaattcaaagtgt
agtatttttctgtgaaaatttaatctattgtaagacattttgcgcaattt
ttaacctcctaggtcaaaaatccagcattccccaggggggtctttgattc
gcactaaagcgaaaaatgaataaaaatggcattttttgcccattttaaga
ctataaaaggccaggaaagggtcaaaatgctttctaaatggtgtcttgta
ctaatattcaacacaaaaagacaaaataaccccagcgagatcgctcaatg
tttcaatttcaggctaaaaaggctgatttTCTCCgattctgggtagcaaa
atgcatgaagcagcatttttgaggacccacaacttttaaactttttaagg
tacacacttgaaattttcagtaatgaaacacttcagagaaagctccagga
aaaaccaattcaaaaatttcctataaatccataatggcgccctagaaatt
gagttttcatgctaaatgccaatattttaagctaaaacttgattttctca
ggctaaaatctcaaaaatggtttccaatggtgtcctgaaattttATGGTG
tagaaagtattctggaaatactttTGGAGGACCAAAatggctaaaatctc
aaaaatggtttcaaatggtgtcttGAAATTtttgggtgttgaaagtattc
tggaaaactctgggagaatcaaaatggtttgggttagaaatgtgccaaag
tctgccattatggaattgtatttcattctaaaacacaatgttTTAAGTAA
GTTTGAGTGTTCttcctaaagaaataaaattcataatggcagactttgcc
ATATATATGTCCATTGTGAACcactgtgattttccttgagtgttcccaga
atactttcaacaccaaaagatttcaggaccctatcgtatttgaaaccatt
tttgagattttagcctgagaaaattagactttaactctaaatatcacgtt
ttagtaggaaatgcaataccatattGGCAGACTCAAGCAAATTTCAAACG
CAAACtattttggttctcccagagtatatccagaatactttcaacaccaa
aaattttcagaaccctatttgaaaccatttttgagattttagcctgagaa
aatcagactttaactctaaatatcgcgttttaaatggaaatgcaattcca
tatGGCGGACTTtagcaaatttctaacccaaaccattttgattctcccag
agtttttccagaatactttcaacaccaaaaaatttcaggacaccattgga
aaccatttttgagattttagcctgagaaaaccaagttttagcttgaaata
ttggcttttagcatgaaaactcaatttccagggcgccattatggatttat
aggaaatttttgaaaactcaaatttgatttttcctggagctttctctgaa
gtgtttcattactgaaaatttcaagtgtgtaccttaaaaagtttaaaagt
tgtgggtcctgcGAAAAATGCTTCTCGTGTCGCCAAGCCTTAAGTCATCT
TTTGAATCTCTAATTCTGGAAGAGAGCCTAGAAGCTTGACTATAATTATG
ATATATTTTCAAAACCATGTCTAGCAGTATAACCtaatttttatgtattt
tatagGTTGCATTCAAGCGTGTTTTAGGGCAAGCGACCAGCGGGCAAGTA
GCTTTATTCGTCACAGTCATCGGAATTACGAACTTACTATTTTTCGCACC
TTTCATATTCCTTTTACATTACGTTGGACTTGAAAAAATAGACTGGCATT
TGTTACCTTGGCTCGAATTGGCCGGTACGGCGGCCTTACAATTGGTGTTC
CATTATTTGGTGTCCTTTGGGATCGCTTTCACGTTTCCGCTGTTCATATC
AATCGGTATTTTAATCAGTGTTCCGTTTAATGCGGTTGTAGATGCTATTT
TCCGGAACGAAAGTTTTGGCATTTCCAAGACAGTTGCATTTTTCTTGATT
ATTGTTGGTTTTATGTTATTATTGATTCCGATCCGAAAAGTTGAACGTTT
GGAACGGAAATGGTGTTGCGGAAACGGACACGGAACAGAAAAGGAGGAAG
CTGCCAGTGGACAGATGTTGGAAAGTGACGGGCTGTGAGACCATAGATGA
AGGATATTCTTTAGTGAATAATATGTGCATGGTTCAtgaacactgacctt
tatatatccctggaccaagctatatccgcaatctttgatcgaagtttttt
aaAAGTTGGCAGAAGCCATTGTAGTATTTGAAACTTTACCTaccgacaaa
cggcgctacatcattagtATACAAGGGAAATAAGATCTAGTGTTCTCTCC
GCCTGTctccgcgggtaccaatttaaaaaaaaactccgatcaaagatttt
gcttggccggcattgagtaacttggtccagggatatataaaggtcagtgt
tcaTGGCGCTCAGTTGGAATGTGAAATGAAAAGGAATTTGTTCCGCTGTC
GTGTTTAGTTGGCTAATGCCAAATAGTATAATATaacctaaaaatgaaaa
tattgtgtTATCCATACAAGTCACCTAGAAAATGTACAGTGTACCACTGT
TCCTTCGAAAATTAATTCTGGATAACTAATTACATTCTggaattctgaaa
aaaaactaaattaaaggctttgtttttacataagtgttcccgtttcat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011827TCONS_00011827Clytia hemisphaericatranscript
TCONS_00011828TCONS_00011828Clytia hemisphaericatranscript
TCONS_00011829TCONS_00011829Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000133supercontigsc0000133:183880..191877 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SLC35F3putative thiamine transporter SLC35F3 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.92	8.53	6.32	5.32	10.52	9.54	12.47	13.33	11.91	15.54	10.23	9.31	7.7	6.45	7.56	10.61	11.39	11.22	9.22	10.72	7.91	7.41	11.8	12.34	10.65	10.02	25.83	21.56	20.8	19.13