XLOC_006801 (gene) - C. hemisphaerica

Overview
NameXLOC_006801
Unique NameXLOC_006801
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000137:143477..147002+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006801 ID=XLOC_006801|Name=XLOC_006801|organism=Clytia hemisphaerica|type=gene|length=3526bp|location=Sequence derived from alignment at sc0000137:143477..147002+ (Clytia hemisphaerica)
ATTCGCCGTCTTCTTGATGGTTGCATTTATTAATACAGAAGTTGAAGGTG
agagattttgtaaatttttataattattagaGTCTATTCGCTTTAATTGT
GTATCAACTTGAAAAAACCcttaaattcaaaagtttttgaaacacctttt
ttatataaatttataaTGTAGTACTCAGAAACATCTTTTAAACAATAATC
ATATTGGTTGAGAAATAATGCGCAAAAAAGGAATTAATTCCCCCTTAAAG
TAAaagaactttttaatttttttatctacCTAGAATTTCGACCTGCTTTC
AGAATATTAAGCATAAATTTTACggtaaaaaaaataacaatatgaTAGAA
ATAAATTCCAATGATGCTACTTGGCGTAAATCTTCAGCATATAATTAAAT
CAACCGctcttttagatttttaataATTACTTTAATGATTTATATTAAGG
CAAATCAAAAGCAGATAAAAAAGCTGCAGGAGAGGAGATCGAACGCCTCG
TCGCGATTGGCCAAAGCAATGATGTCGAGATGGAAAGAATTTCCAAACAA
AAAGATTCTTTGGACAGCCAATTGCAACGAATGAATGCGAAGAGAGATTC
CATCAGAGCTGAAATAACAAAAATTCTTGATGAccatcttccaatcaaac
gTAGGTCACCCCTTTTATTTGATAGAGGATAGAACGATTCACAAGAAGAA
AAGTCTTACGTGTATTTTGCacatttcacttttttgaatattGTCGGTCA
AAAATGCCAGTAAAATAATTCAGCCGCTTCTCATAGTAGTTCACcgaaat
tataaaattttctcGATGCAAAAGTTTCTGGCATTTCTTTCTGTGGTTCT
TTCTTTGATTAATTTCGCCAGATGCAGTTTAAACATATCGTTTTTACACT
TTATTCTTTCTTCGTCAGCTGTAAAATTCAAGATTTACATCTTGTTTATC
GAATAAGGAAAATTTCTTACTTTTCACTAGGCCAACGTGATTGTTAATAA
TCCAATACTTCTTGACAATCGAATTACTCTTGTCcaaataagcagggggg
taggaaaatgTTCTAAATTCTNaaaggaaaacttttttttgtttagtCAG
CACAAAATCgaacacaatataacaataggaaacACCGGCCCGACAcaaaa
catgtgtctgatataaaacgggttttgtttttaaactagccatagctttc
actaaatgcccacgcagaagatcatgtcatgcacttataaagcttttaat
gctttaaagattaaagcattaaaaaaatcaggaataattgattgatttaa
ttattgaatgattgattagtTGATTGAGGCATATGCTTGATAGAAAAATA
TTCCATTAACACAATACTAGAAGAATTCgtgcagcttgataatttgataa
aatttaaggaaaagcttcaaaaatatatttaaaaaattatggtACATTAG
NTTAAcacaatacttgaagaattcgtgcagcttgataatttgataaaatt
taaggaaaagcttcaaaaatatatttaaaaaattatggtACATCAGCTCa
ctggttttcacatctcctgtttgtttttttctcccagtttctttcttaca
acaatatttgtcattattcacaatagaccttttctgataatgccgcagac
atcttagattgtaggcaaaatatatagcggtgaataaatcaagAAGGCAA
CCAATCAGAAATAGCTTGCTTTTTTCATTGGCTGCTATATTTcaacaatt
ctctattgctactttgcctaataaacaatagtcaagaaaatactacgtat
aaaatttatcaaaaagttctgcgccatcttaaattgggtgaaatgaaacc
aatcctagttaaggcccgacGGGCTCCTCTTGTGtgcgctgtgattgcac
ttctcaagctaaattttctatgttgttggtcaaaagaaaaataaaggaat
gccattgtggtctatTCAGACTTACAgttgagaaaagttgaaatgcgctt
taattttttttcaagtgcatagtactttttcatgatgcaatcttttctcc
aagctgaaaggatcgaagccattaagatgatcgcagtgcagacaatgaag
agacatgcctccaggaagctagactttttNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTTTTCTTTACAGG
CATAAGCTCCCGTCGAGATTATTCATTTAGTGAAGATGAGAAGGAAATGA
TTCCAAAATGTTGTCCATGGGTCATCTGGTGTTGCTTGTAGAAGAAAAGT
ATACTTTTGGGACTTGGAATATTGGATTATTTTGATTTACAGTATATTGA
GGTTAATTAGGATTATAGTGATAAAGTGGAAATAAAGAagatttaattta
aaaagttcGTTGATTTACTCATTCTATTCGCCTTTTTCCTGGTCTCATCC
TTTTACATAAGATTTTTTTCCGATCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012090TCONS_00012090Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012090-proteinTCONS_00012090-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000137supercontigsc0000137:143477..147002 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.78	0.64	1.78	0	0.23	0	4.32	2.79	99.82	19.47	69.35	120.09	2.02	1.56	27.38	21.73	0.2	0.34	0.7	0	0.3	0.64	0.39	0.71	0.28	0.83	0.15	0.33	0.6	0.49