XLOC_007178 (gene) - C. hemisphaerica

Overview
NameXLOC_007178
Unique NameXLOC_007178
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000156:300871..305048+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007178 ID=XLOC_007178|Name=XLOC_007178|organism=Clytia hemisphaerica|type=gene|length=4178bp|location=Sequence derived from alignment at sc0000156:300871..305048+ (Clytia hemisphaerica)
CTTAACCACCACCttaactttcactttcactttttaaaACACTATATACA ATGAATAAAAACCTGAGAATGAAAAGAGCTCATAATAGAGAGCTTTCTAA GCCATTCGTCAGATGTCAGATGTTAAGGGCCCATAACACAACACCACCAA AAATCAGTAGATAAGCTATTGCGAATCTTGAAGTGGCTTTATGTTGCTCT caaatgaaaattatatatGTTGTTTTTCATGGAAAAAGGCCTATAATTAT CTTGACTCTTATCTTGAATTTCATCAGCTTTTTAAGGGAGGGAAAACCTT ATAAAAATTCTATATGTAATAAAATACTTTCCTTTTATTTGGCAGAGTAA TTTCAAAACTGAAATATTGTTTAAGGATGCAGTACTTAACGTTATCTTGG TGTTTTGTTTGGACCTTAGTTGTTGCTGTTGCATTTCATCATTGTAAGTT TTTCTGCTTTATGAATTTTATTCCAAATAAAGAGTTTTTCAACCTTAACT GATCttgtttgaaaacttttttcccaataaaaatattataaataaaagat aaaagcaGTTTCGTTGACaattaataatgataataacttctttttcagtt ttggtCAGTCACCAAAATTGACTTTCTTTTCTTAATCTTTTAGTTTCATA TGGGGAAAATGACATTGTTGTATCAGACATCAGTGAAGGTGTTGTTGATG GCATCCCAGATGAGATGCCAATCAAGGATGGTATCAATTCTGAGCGTTTC ATACCAACCCATGAATGGCAAGTAATCAAAAGAGGGCAAGCCATACCTGC AGGACTCCATGTTCGGATGAACTTTCAAACAGGTGTCAAAGAAGCTAAGT TGATGGATTCTGAAAGTAGCGAGCAAAAGTCTGTGACAAAAGGAGAACAA TTCCATGTGTCAGATTCCAGCAGTAAATCTACTGAagagataaaaaagaa aaagaaaggacCAAAAATTATTCTTGCTGATGAATTACCAGATGAtacat tttcaaatgaaaagatACATTACAAGAAATCACACTTGAAACAAGTTCTT CACGATTTCAAAGACAAGATTGGTACAAAGGATATAGAGCATGTCACTTG GTCTGATGATGCAAAGGATATGCTGCAAGAGAGTTTTGGTGAGGAAAAAG GTAAGTCCTGGTACAATATTacaaattttattgatttttttcagaaatca ttgaaatcaaGATGTATTTTGATTCCAATAATGAAAACTTACAAACTTAT ACATGCAAAATGATTTCCTGTCACAGATATCACTTTTCCTTATTTTAAAA CATAACAATTATTTTATGATGGTTTTTTATTTCAGATGAGCCAAAAACCG AAGCCAAAAAGTTTCGTTCAATGGATGAGATTAAGAAAGATCTTGAAAAG AACATGGGCTGGAATATCAAATCGGATGTTCAAATCATGCAAGATATCGT CCACCAACTAAAAGATGAAAAAGCAACCGATAAAGAAAAATCTGTTTCAC TCGATACTCTTGAAGATTACGTGCATCAAATTGATAATGGACGTGATTTA GATAAGATTGGTGGATTGAAAGAAGTTATTCATTTGTTGAATGACTCGAG TgaaattttacaagaaaaagCTGCTAATGTTATTGGTGGTGCTGCACAAA GGTAAACatggaaataaaattttgtGTTCATTGGCTCGTATTAAACAGGC AATTTTAAACTTTATTCTATGATCAACAGCCATTGTTTCCTCCTCCCTCC ATTTTGAGAtatagttgactctctctaattcgatcttcaaggaacGATTC TGATTCTTCTTCGAATCAGAGAAAGGTTAAGTGGAAGGaaatttccagct gaggggaccaatattttagttcaaaCTACAGAAAGAATAGAGTGAATTGA CTTTATTTGGTATTCTTCTATTTTTCAGCAACAAAGAGGTTCAAGATGCA ATCTTCAAACACGGAGGCCTGAAATTCTTAATTCGAATGTTGGACTTAGC AAAAGAAAAGTTGACTCAGAAGAAAGGATTATATGCAGTATCAGCTGTCA TTCGTGGCAatcatcaaattcaaaatgaGTTTGTCAAATATGGAGGTTTA GGTTCAGTTCTTCGTATTATCAAAGAATCTGAATCAAATGCCTTGAAGGT GAAAGCTGTGACCATGATGTATGATCTCATTGTTGAACAAAATGAAATTA TGCAGAAGTTGATTCAAGCTGGAAAGATAAAACCAGGAGAACAGTAAgtt gttctttttcttttgattttgccataccattttatatccatacagggggc tggaaaaaccatttcttttgattatcttgttgttgaatattttgaatgtt GACTGCTACCTTTTAGCATTTCATAGGACGGCCCTTCTAAACTTTCgtga tttttgcaaattttggcctttttcacgaaagtaaatgtctttgaaaattc ttaacagggcaattcgcgaaagtttatgctcgcgaaaaaatttcaaaaaa attggaaatctataaaatctcgaaatcgtaataaatatcaaattttcgtc ctgatttttcgacctcgtgaaagtttgtacgcgCCTAAAGTATTCAAAGA GAGGCCGCGGCTAAGGTTTGGTAGGGAGCTATATTTGTTGACAATCTTTT CCCATTTTTCATTCAGGTCTCCATTATTCAAATCTCTCAAAGAAGCTGGT TGGTGTCATCTACTTGTTCCAATGCTTCAAAGTGAAGATTATGATTCGAA AGAGAAAGTCATTCAAGCTCTCGTCGTTTCTGTCCAATCATGTGtcaaag aactcaaaaatgaaaaatatatttcagaGTTGACGAAGCAGTTAAAACTT CTTGAGACAACGATAGTAGAAGAAGATGATCAAGATTTTAAGAGCTATCT GGTATCGTTGAAACAACAacttgctgaaaatattttgaaacaattagTTT GATGAACACAGTAGTGTGTTGTTGATGTGGAAGAGAAGGATTTGTTCTCG TGATACTTTAAGGACTGAGTGGCAGATATCTTGGTTGCTTTTAAGATTGA AGAACCAAAATGATACAAATTCCCAGCTGTGAACTGGTATTAACTTGTCG AATTAAAACAACCACATGTTTTTAACTTGAGTACCAATCTACTCAAAAAC TTTTCCATGGAAGGTCGATGAACAGGCGATTTATTTTGGTATGAACTCAT AAAGAAAGAATCAATATGAATACAGAATAAAGCAGAATATTCGCGTTCAT ATTTTTAACATAGTAGCATATTCAATTTTATATTGCGTAGCTGGGATCAA AATACTTCAACCTTTGAAATGCGGGACATCAGTTTTGTAAGATGACGCGG TACAGTGGGCTGGTGAAGATAAAGTTGACTGCAGCTCAACTTTTTTGGAA TGAGCGCATTGTATGACGTCATTGATAGACAAATTGATCTCCCGTATCTT CTGTTTAAGATGAATCGATTGGAGGTTGATTAATGGCTTGAGACCAACTT TTGGATTTAATGGTAGTGTCGTCTTTACTTTAGTAGAttagattattttt aaaaaatctttaaaaaaatgtagtatttagttttttgaatttttattaga ATAATTAATTGTACATAATTTTCTGTCCTATTAATTTGGAAGGTCAACAT ATTTATATGGCAATTACGTCACATTTTTTGTTGTATTAATTGTTAGGAAG TTGACTGCAGTTCAACTTTCTTGAAATTTGCATCAAACTGGATGTGTAAA TTGCCTATTGAAATTGATTGACCTCTCTTtcacaatgaaaattattttgt caGGATTTAATTTAGTATATCAGCacgttttgtaaaaatattcttcGTGG ACTtaatcttttcaatttttttttctggtagTTTTATCATTAGTTTATAT TCTGTTTTTCAAACTCTTTTTTAGCATTTTGGCTTACATTCAAAAGGATC AACTGTAAGCAGAGATAGCAGGTAGTCTACTGAATTTCTGCCAATAACAT TCTTTTTAAACATTTGTTAGATttttactaactttttttgaatttattta ttagacTTAGTGGGGAATAATTACATTacaactttaaaatcttttttacg AATTTAACTTTATTGTAATATTCGAAAGTATCTTCTTGAAATTATGAGAA AATCGAACTAGTTTTTCGAACAAAGATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012792TCONS_00012792Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012792-proteinTCONS_00012792-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000156supercontigsc0000156:300871..305048 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SIL1PREDICTED: nucleotide exchange factor SIL1 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.29 9.22 4.89 4.82 59.67 40.59 23.9 23.07 10.16 20.51 9.72 13.47 9.59 6.53 11.06 16.1 10.85 13.51 7.75 9.8 7.56 5.52 13.26 16.48 12.39 12.32 13.17 7.99 16.36 16.11