XLOC_007224 (gene) - C. hemisphaerica

Overview
NameXLOC_007224
Unique NameXLOC_007224
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000157:142695..148883+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007224 ID=XLOC_007224|Name=XLOC_007224|organism=Clytia hemisphaerica|type=gene|length=6189bp|location=Sequence derived from alignment at sc0000157:142695..148883+ (Clytia hemisphaerica)
tttaaaagagaaaattgtcttttggtatttaaaaaaatgtgaaGCTGAGA AAATTATGAGGTTGGATACTCAGTATACATTATTTTTTACAATCTTAATA ATTTGCATTACCGTTGGTTATTCTCATGTTCTACAACTCAAACAATGTCG AAACTTTGATGCAGAATTCTCAAAAATCACATATGGTCAACGATTACTTG GAGATATATTTAAAACGTTAGATTCAATATCTTTACGGCGATGTCTAACC AAATGTTTGTATTATATGGGTTGTCTCTCTGTTAATTACATGCggaccaa tcaaatttgcgAGATTTTAGGGAACAGCTTACAACGAAATTCATCAGCTG CGCTCTCATCCAATGAAACTTGGAATCATTTCGAAACAAACTACAATAGA CGAACGGTAAGAATTTGAAAATGGCCGCATCCAATGAAATTGGAATCTAA AAGTTGCATTTTAGATACAATAANTTACGATAGAAAAACGGTAAGAATTT AAAAATGGCCGCATCCAATGAAATTGGAATctaaaaaatgcattttagaT ACAATAAAACAGCCGTAATGACGGCTTCAAACTCCAggaattgtgatttt tgaatagtgaaccattacacgtttttttcttttattagaacccagtttat aagaacatcgaggctgaaattcgtcgaaaatttaagaacatcgtaagaac atgcccagcctcagtttggaaaaaaatgacaagaaactacaattttttcc tcttttcaagcagttttaatcaaacttaggaatggattttctaaatcgag agtcaaatattgtccaaattttaccaattttaagtgctctttattttgca tgatattgttgtcgatttagagtagtatgaaaatttaagaacgcatctaa gaacatttcaggctgaaaattgctaaaaaaataagcacatccaggctcag ccaaattttaggtgttctaataaaaaaaaaaacgtgtatgcaaaCATCTT TATCGTGGTCAGCCTTTTTCTAATATATCTAACATAAACCTTAAAAGAGT ATATCCTAGTAAGTGCGAGCGCAAATGCAAACCAAATCAGGAAATCAAAC CGGAAAGATTGGGAAATCGAACCTGACTATCGCGATTAATCggatttacg cacaattacaaatgaaaaacactgattttatgAAACTCCTTAACCAGAGT TtaaccatgccaaatttgaacaaaaaatagaTTCAGGAGGTGATATTTGA AactatttttgtccatttacaACGGATAGACGGCGAGAAAAGAAACCTTT CTCTAGCTAAAACATATTTAAGAAAATATGGTTTCACAAAACTCGAGTCT AGTCCTTTAGTTcactttttatgattctgatagcgctcgcTTCCATTAGT AAACTCAAAAAGTGGTGCAGGTGGTTCTAGGCATGAGATTGAGATCCCAT AACCTTTTTGCACATTCCAACCGCTATTACACGATTAACTTTTTTTCTAG ATTGGTATTTCGTGTTTCAAAAGCAATCCCTGTCCTGCAGATAAACGTTG CGTGGATAATTGTGATGGTCTGACCACTTGTGTATCTATTACAGTTGGTA AGGCATTATCTACATTAAAGTCCACTCTCGTTTGTTGGGTCGTTGGGTCT CATAGTTCCAAATAAGGGGCTTTAGAAAAAATGGACTCTAATTCGAAATT TGCGGGGCATTCTGTTTTTTTTGCACACTGGTTCGtgatagaaaatgaaa aaaattaaaaccaaacATTTTTCCCATAATGCCAACAATTTTTGCACAAT TTACACCACAATTTTGCTGTATGAATGTTCTCAAAGTAAGTAAGTCtacg accgcagtcggaggcgacccgaagactCCTCTTTCGGGtactctttcgat agctatctacccgaaggaaggggagggcgccactctttctccctgggtTG CTCCCTACTTACCCTTGAtcattctcttaattgctgagcatcaagcagag aggcatcaagtaccattttgggaatctttggtatgacccggctggggctT GAACACACAACCTTgagaaccgtagccggatggtATACCACTGCACCACG GTCGATATCTCAAAAGACATTTAAAATGGCTTTCTATTTAGAATCATTGC GAGGTCACCTTACTACAATCACCGCATCAACAGAATCGCCCAGTTGGGGA TCAGCTTCAAAAGCATTTGATGGTTCGGAGACGTCTCAATGGCATACACA AGGTGGTGCTTCTCAAAAACATTGGATCAAGGTTCGTTTTATTTTCTGGT TACTATagctaaaggcttggggacacaagAAGTCTTTTTCGCTTTGGTGC AATACAAagtgctccatcccaccaacacaagaaaaaagtgcgtgtcccat ggtttctttttttgtttcatgggacaataAGTGagagaaatacccaaaag acacatTGATTTTGTCCCTgagacaatggagcaaaattgattaaGTGAGA GAACTGAGAGACAAACAAATGTTATCAAAAGTCTTGTCGAcggatttcac ttttattggtataAAGAAGACACAAGAAAGCGTTTCAgattggtgggatg gagcatgttgaattgcaccaacgcgaaaaagaCTTCTCGTGTCCCAAGCT TAACTCTTGtaaatacacaggttgcaagaTTAAAGTCTGaaggggtttgt acttttacggtgtgacgcgATAGGccctttttagtacggtattacgggat ttgacgaaaaaagagacgggaaaacggtattttaaaatcagacggtgacg gtatttaggcaCTTTTTTGCCCggtacaagccggtgtgacggtgttatta ttttttccattttcgggattccgggattcagcaaaagttttgacgggaaa acggtagtTTAAAATCAGACGGGGACGGTATTTAGGCACTTTTTTGCCCg gtacaagccggtgtgacggtgttattattttttccattttcgggattccg ggattcagcaaaagttttgacgggaaaacggtatttcgaacccctccaac ccccccccccctgaagacaaatcacgcttttacccaacatttttatgtgc ttgttgcatgacatttatttctgattggttcgaaaacTAATGTTATCAGC TGTGTGTTGTAAAGTAAGAAACATGGTAGCgaaacatgggaataaaatca cgtgaactttttcgagtaatcacatgtttttaCTGCATTGATACagtttt gcaacccgtgtatttcAACTTCTATAGACCGCGTGGGCatatttttgtcc gttttatcaATCTAAAACCTTCCCAGTCTTTTTTCcacacctatagacaa tagaaaaaaaggtgtaaaaaaaggatcGAATCGAGTTTAGGAAGATAATT AAATATAATAAAGTCggacgcgcctgaccgcgcgactacggttgaAAAGA TGTATTAGCGTTCGAATTAACAAGAAAAGTCGTTACAGTTGGTATAGTGA GGTCTACTCACAGAAGAAGGTAAGAATGCTTCAGGTAATGATTAAATGCA TGAAATACACCACAGAGGgtttaaaattaatttcaagTAGTAGCGTTGAA TTATTTCACCTGACCACCTGCTAGATGACCATTTCAAACTTCATTGTcct aattttgatattttgacgaaaacgtttcacctacattttggggttTCGCT GACCATTATTTTGAGGGTCTTTATAACCCAACATATAAAAGTCTGCAAAT AACTCATAATAAGAAAGTACAGCCTGAGatgttgacattttgagctttta cgacGGAAAGAATTAACGAAAGGTTACTCGATCATTACACCCCTGTGtaa cagacccgctgggactcCCAGCCCGGACAGAAAATTTGCTTAAGCTTGAA AAGAATAGAATTCCTTTCCTCCTTGGGACTTTGACAGAAATTTTTGTCCA CACTTTGGGAAAAGGGCTGCGAGGCAGAGGTGCTGtatttcaacacaaaa ttttctttttccctAAATTAACACAAAAATTCTTCAACATCAACTACTTT TTAATTCTACATTAGATCTGGTTCAATATCTTAGTTGAGAACtgcaaaat ttcgttgaaaacgTATATGAATTCATATCATTTGTTCTTGTTGTTAAAAA GCGGGCATTAATTGTTTCactaatttatcatttttatcatctttttAAAA GGCAGAATTTCAATCGCGTGTGTTTGTGGATTACATAGTATTCGTCAATC GATTTGAACAATTTATAGACATGCGAAACAATAACATGGACCTCTTTACT AGCATATCTGTTGGCGGTGCACAAGATCGTTATATATGGTTTGCAAACAC AGGTAATACAATTACATTCGAGTCTACTTAACTCGAACCATAGATTTAAA ACTTAGGCTAGATGGCGTACTTTGGCTGAAAAATGTGCCGAGGTTAGgca ggaaatcctacctaaatcacgtgacattacaatagaatttcaacgcttga ccaatcagaagcttcgcaggttttcgaaaacaatagcggcaatatttttt ccgatatcaaatttttttgcctacAATGGCTTAAAGATCGACATCTGGAT CtagatctagcccttcgggctttataaatctacgACTCGAACACGCACAA AGGACCATAAAACTAGTTCGAATTAAGGAagcattcgaattatagaggtt cgagtaaAAGAGACtcccgggggggcactgggtttacggactgacggtat gtgcgggccaaaaattggcttttaaaattgcacccttacagtgcagcaaa aatcagtgaaaatcatacccttagagtgcattttcccccaaattttcgat ccctttcgtgcaaaaaatatggtcaaaattttggtcaaaatatctctgtt tttcaagaattttctgagatttctacccttacagtgcatctttagttttt ccgacccttacagtgcattttaaacatcttggaaaaggtacccttaggac ccgcacatacccgtcggtccttttgcccagctgcccccccccccgggggc cgGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNccccccccccccgggaagagactccattgtatcaa gcatttttagatttcttttttagagccaaagtttaaaaaatatataatat ttttaacacatccctgtgtcacagacccggttgaTCCGCTGGAAACtttg gccaaaatttcagccccattggGAAATCGAATTTGATTTCAATCCATTAA AAAGTCACTTTAAAAATTGAACTCCTGCTCCTTTGAGATtggaataatag aatttctattccaatgggattttgatagaaatttttgtccccgAGGGTAA AactttcaccggggctgtgagacaggggtgtttcatCTGAGGACATTGAC CTGAATACGAGACGtcttgaataaaaaataaaatcaaatcaatatatTTG TGCTTTTATTCATTTTAACAGGTGATTTAGAGGGTAAAAAACGAAGAATG TTTTCGTGTATGAGGTATGCTGATGCTTTTTATGCTGAACAACCTCAAGG TTTAAGTAACACCGTCAACATTATGGAGGTATGGATTTATGGTGCCCAAG TCTAAATAAGGAATCTGTAATCAAGAGTTTGCCAAGAGAAAATGTAAGCA AGTtttatgtacacgtttttttataagaatagactttataagaatgtcca tgatgaaaatggccaaaaaattgaacataatgctaagaatatcaccatca tggaattttgctactcaagctaagaatgccatttttagagcatttttaat tAGAAATAGTCATACCAAGTTAAGAATGCCATTCTTAGagtattttcaat tataaatagTCATAATCCcaaagtaaggctcactcctttcacaaaaatca tGGTTttagcccacttttcaggtgcccccattgaagcatggtgcccccaa cgagttaggtccccttgagaaattACTTTGAGTTAAGTACCCCTATTCAg ccgataatttttttgaattgacactttttgttcttttgtcattcctaaaa tcttaatgatttttaaatctttctaatgatgaagaagaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012880TCONS_00012880Clytia hemisphaericatranscript
TCONS_00012881TCONS_00012881Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012880-proteinTCONS_00012880-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000157supercontigsc0000157:142695..148883 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.13 0.32 0.49 0.37 0.55 0.23 0.41 0.56 0.31 0.7 0.1 0.36 2.21 0.81 0.12 0.03 0.27 0.36 6.62 10.43 0.32 0.76 0.62 1.1 0.66 1.2 0.18 0.17 0.36 0.07