XLOC_007228 (gene) - C. hemisphaerica

Overview
NameXLOC_007228
Unique NameXLOC_007228
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000157:289982..298366+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007228 ID=XLOC_007228|Name=XLOC_007228|organism=Clytia hemisphaerica|type=gene|length=8385bp|location=Sequence derived from alignment at sc0000157:289982..298366+ (Clytia hemisphaerica)
TTCAGGCTGACATATGGAGTCTTGGTGTGGTGTTGTATGGTTTGCTAAAT GGATTTCTACCTTTTGACATTGAGGAGGATGAACCTACATACCTTCTGTA TGACAAGATAAAGGTTTGTGACAGTTGAGAAtttgttttagagctttaag cAAGAATTTCAAAGATCATCTTTCAGGTAAggagacaatttttttttgtg aaaattaaataaatgtaCTTTCATTTCGTTTACAGCTTGGAGAATTCGAA GTTCCTGATTGGTTAAGTCAAGGTACATAATGATTAGTTTTAAATCTACC AATTTTCACAATATttaatcaaatttcattttacaaAGATCCAATAGCAG CACCCCAATTTATGGCTAAGATTGATTGCcacatttttctctttttcatc GCAGGAAGCTTGAAAATGTTGAATCGTCTATTGACAGTGAGTAAAAGCAA ATTTTTTGCTCTCTTTTGTTGTATTCTGAGTTAAAAATTATGCTTCTACA TTTAACAAGTGGAATTCAAAGGAAAAATTTATAATATAGAATAATATAGA ATAAAACAATTCCAACACCTATTTCGGAGTCCTATAGTTCATACAAAAGT TTTCTAGCTGTTTATTAGGGCACCAGATTCTTCAACTGTGTTAAAATATC TGTCTTCTTCTTTTTGCAGATTTACTATGATTGGATAACTAGCTTTTTTG AAAGCACAATTTTATGGATTCCTCTAACAAACTATTATATTACTTTTGAA CAGGTAAATCCAGAGGCTCGAGTGACAACAAAAGACCTTTTGGCACACCC CTGGCTATCTGAAGGATATGGAAATCCTGTAGAATATAAAAGTCCTCTTT CAGTAAGTTAGATATCCATTCGTAAATATCTTTCATACAattaaatatgt aaaaataaaatagcTATCACATCATCATACAAATTGATacaaaatgcaaa ataattgaaatcagTCCCAAAAGCCAAAGTACCGATATTCAACTTCATTA TGGATATTCAGCTTTTTTACTATATTAAGaccaaaaagttactttttctt ataaaatccTCATTGTTCAATACCTTATGAATCATTTTCTGAATTTTCGT CTCTCAGAAGGAAAAACTGGAACCACGAATCGTTGAAGAGTTAGCAGATT ATTACCATTCAGAGAATGACGGTTCTATGAGTCAACTTGTGAAAGAGGTA TGACTGAAAATgatctaccgggtgcaccaaaaaaagtatacaggtttttT GAGATATTGTGAACTTCAGGATTTAgaatttttgttcattctttttttat cgtatagaagatgctttaactttaattttgagctatcatacattaaattt gaaaaagttgttcgaaagttattcaaaaaacttttttttcatgtcgaaat tttataaaatcattaaaaacagcgagcaaatttctctcttgacacttacc ttcATTACACATccaaataccaaaaaatgcaaagttGTCCATTAAAGATC ATTAGGGAATTCAAAAATGTGGAAAACAAGCTATTCATATGtgggatttt tgaaaaaaactgaaaaaatctttggaaatctccaagagaggttttgatgt tatgtgtgaATGTGttgtgtgaaaattttttttgtaaaacagtTCACCAC ACCTCAACTAACAGATGCTCAAAGGACTTGGGTTtgcattgagtttgctc gtATTGGAAATGCGCATGAGGTGCAAAGAAGATggagaaactgttggcaa aatatcAACCCTCCTACCGTTAGAACAATtgtgaaaaactttgaaaactt tgaagGTGAGGGGACTTGTCATAACTTGAATAACTTCCACCCTATGTCTT AGTATCGAGACAAAAGCTTGAACCTGCCGATCCTCCTCGAAGAGTCGTCT TTTGCAACTGGTTTCTCCAAATGGTAAATGGTGAAAACAACTTCTTAAAC AATCTCATCGTATCTGATGACGCAATTTTTAGCCTTAACTCTGAAGTCAA TTCACGAAACGTTATCAAATTCACTCAATACGGCCGAGGACACCCTCCAG ATCACTACGTTGAGTTTAAACAAGGTGCTGACCAAGTGATGGTTTGGATG GGGCTAACCGGAAGTGGACAAGTTCTAGGGCCCCACTTTGTAAGAGGCAG ATTGGATGCAAGGGAGTATCTACGAATAATCCGATATCGTGTAATCCAAT GAGACCTCCGGAGGCTTGGAATCCAAAGAAACAACATGTGGTGGCAGCAA GATGGTGCACCTGCGCACACAAGCAATTGAGCAATAAACTACCTGAATGG CCAATTTCCTGGTAGAGTTTTAAGTGGCCGAGGGGATCAAGATTGGTCTG CAAGATCACCAGACTTTACAGTGTGTGATTTTATGAGGCTATTTAAAACA CCAGATTTGGAATCGGGATGTTGCATTACAATAGGGATTTATGTTAGGAA CAGATCATGCTGATTACCCTCTTAAAATGTGCCATAGgttataaaaactt gaaaaaacatcaatttttagggTAGGAACCATTTTTGGTTTCCCTACCTG GGTATTTAGGGTCCACCGACTGCTCAAAGGGGCTGCCCTaggagtgattt ttttctttgtcaaaagATAGTCatgtgacccctcattggaaagAGAATTT CATGCAGATTCCAAAAAAGGTCACAAGTAATGGCTAAAAATGAggttata aaaagttatgcctgctaaaaaatgatgattttgtgattttccctCTAAAA ACGCATGTTGAGTATAATAAGCTCTTACAATCATTTCCCTATCCAAATCG TTATACTTTGatcaatactttcaaaaaaatcatacagAGTTGAGTAAATC AGACTTTTTGTCATAGGATAGCAGTATTTCTTCAAGAGCTCAGTAAGTAC ATGTATGAAGAACATGGTACTCAATAAAAACATGACATTCTTGAGCAAAC AAATctaaataactttaaaaaatttataaaacccTCCAAAGAAGTCAAGG TAATTAAACTTGAATAGGCTGATAAAGTCAAGGAGCAGAAAACTGAAGCC TTTACTGAAAAATAAAAGGCAAGATTGAGTGAAGGGTCAAAAAAGTACTC ATTATTGGAGACTTTTCTTAGGCCCATATAACTCAGAAGAAGAAATTACT TTAGAAGTACGTAGAAACAAACTTGGATGATAAACTTAAGAACAAAATGA TGTATAATGAAGTGAAATATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNtttcccccaccatatttcaaaat ttttcggttcccccctcttttttgaatttccccagctatttgaagatttt gcggttTTTATGATTccaaaaatccatttttaacGTAGATCCCTAATTAC AACCCAAAGAATTTGAGACAGCTAAAAGCAGCTATCACAACTGATGTCAA AATCTCAACCCTGCCATGATCAGAGATGCTTTCCAAGAAATGGTTAACCG TGCTCAAAAGTGTTTGAATGTAAATGGACTTACTTTTCCTAATGAATAAG AaaaacaagtatcaaaaaataaaatagtgTTTTTGTCATTCGTTTTATCT TCTTAATAGCTTGATTGTTAAAAGAAATTTGCTCGctgttaatgattttt tgaaatttcgacatgaaaaaaaagtcagttttctaaaaataactttcgaa caactttttcaaatttaatgtatgatagctcaaaattcaagttcctctat acgattaaaaaagaatgaactaAAAATCTGAAAGCTCACAATaactcgac aaacctgtatactatTTTTTGGTGCTACCGgtaaagttgataaaatgttc AAATCCGACTTTTTGGCCAGTACAAGCAAAAGATGCTGTTCTCtgttatt tgatttgaaaaatgatcatttacaatacataattttttgtcCCGactatt caaaattttgaatgtttggtgggccccactttttttttaactgatttaaa atctttttattatttGCAGTTTCAATATGATTCGCTGACAGCTCATTATT TTCTATTATACAAACTTCGTCAAAAAACACCTCGACCGAAAGTTACCTTC AAAACACCTGTCAGGTATTATTAGTTATAGTTTCATTGAAAACGTTTAAT AAGAGTtagaattttggaaaaagaacTACACTGTTTTCAGATGAAGTCTA GTAAGGACCCTGAATGTTCTTTTGTAAAgttgttttttcactttttcacc tTTACTCAGAAACACAGGAAAAGGGAAAATCACCTGGATGGGAAAAGTGC ATTTCACACCTTGGAACGTGCAAGAAAATCCCCTtttggagggggggggg gtcatttatGTTCAAAAGTGTGAAATATCCTTTTCACACCCGAGTGATTT ACTCACTTTTTCCTGTGAATGGTATCTGATCTGTTTTACTTTTAGACCGA AGACAACGTCCAAAATTCAAAAGGAGAACCAAGTGagttagaaaaaaatt gtgccTCAAGattttcaacattcaattttcgaaaggaatcttttcTGGCC TTTGACTTGTCTGTTTCCTTCTTgttttttaagactttttttctccagga atgaaaatgttatttcttttcttttttatagcaACCTAAACGAAATTGCT ACAGTGTCAGCATTGATGATATCGATGTCACACCTACAAGAGAATATCGA TCTAAAAGTTGTTCCAATGATCGTAAGCTTATGATTTGAACCGAGCAACA TTCTCCTACCCTTGATCTATTGATCAATTGCCTGTGATCTTACACTGGTC GAGATTTTTACAACTAAAATTTCAACAAGTTGAATAGTAGACTATTTTGC ACAACTTTGAGTCTCCCTAAACTCGAGCGATTTCTACCTCGTCTGGTGTT TAAGGAATGAAGACCATAAAGCACATGCACAAGCACATGTGAACCTAATT ACaataacttttttcttttcgttACAGAAGACTTAGACGATATGCCATAT ATTGATCCTTCAGAAAAAGAATACATTTCACCGTTGAGAGACACCAGAGa gtaagtgtttttttttcattgaactttttagttaaattggtttctaaaat gataatttttattatttgcagccttttaaaaataatgtttcaaaatttat atacTCAGCAAAGTGAAATAATTACAAGAAAGACTACATAAGGTATGCAA TATTCCTTTTGCAATCTAAATTTTAATCATATCTTCTTGTTTTCCAGAAA AGCTTCATCGCACGTGGACAATTTGAACAAATTGATTTCACTCACGCCAG CACGTCCCAGACCAAATTTCCATAACAAACGCATCGGTGGAATGGCCGCT GGTCTTGTCACCCCAAAATTCGCTAAAAGGGTTTGTTCTATTGCCTTCAT TGTCCCTTTCCAGAGAGCTTTATCTCGAGGCATACATTTCGACAACGCAT GACTACACGATAACTTGGTTAGCAATCGATCTTTAGCATTAAGGATATGG AATGGAAATTAGGCGTGCCTTATATGCTAACAAATCAGAATTATCAAAAG CTTTTCACAAAATTTGTGTTCGCACGGCGCGGTTGAGAGAGAAAGTTGTT CgttattttgtttaaaatatttgtctAAGCAAATAGTGGGGGACTTGAAA TAATTTCCTTTTTAATAATGAGATTATGAGTTAACAAAATAGTTTCTGAT GGTCACTGATTATAATCTCTTCTTTTTCAGATCGGTAAACGAGTTGCAAA CTTGATGACGCCTAGGAAAAACCAAGGTGGTGAAGAACCTCGAAAAGTGA AGGTACAATCTTGATTCACTTTGTGgtcattttgaaaaccaaaGATAATT gccttttttgacaaaaatctgtTCACTGTAAATGTGGGAGGGGTTTCCAT ACGTAGCGGAAAGAAAAGCTTCAAGTACTGCTATGAGAGAAGCATAATTT ATGAGATGATGATAGCAATGTGGATAGTTTATTGAAGGCTTTAAAACATC TATTTTGTTGTCTTTTGTAAAGAGTTCTGGTGTCGATGgtatcttataca aaaaattcaGAATCTAGTTTTCAAAAAGCTGTCTGTTTTTTTTCAGGCTT TATACAAATGCAGTACAACATCAACGAAGCCAGCAATGGAAGTACGACAA GAGGTGGAAACTGCTCTCATGAAATTAAGAGCCACTGATCGACTCACCAG TTATGAAGTCTCACAGTATGAATAttcatgttttgttttctttcagtttt ctcaaacatttaattcatcaaagtaaaaaatctttttgtctagaaaatga aaatgcaacATAGCTTGAGTAACTGGCTTTTCTTAACACTAATTAACAct taacttttttctttcagatatCTGTTTAAATGTAAAGGTCGAGACGAGAG AGGTGGAAAGCTGATCTTCCAACTCGAAATTTGTTCGGTCCCAGGCCTTC AAACTATAGTTGGTAAGATATTACAATGATAGTTTGAAGATTTGTGGACG ACCGATATTTCGGTTTTGGATAGTCCACTTCGGCTTTTGTACCCATAAAA TAGcttagcataatattttgataaaaccgTAAAACTTAAAAGTCTTAACA TAAACCACACGTAAAATTAATGTTACGGATTCTAAAGAATGGCTTTCCAA aaacacacattttttataagaatatccaaaacttTAGAAACATTCTGATG TTCcttactttttgagttttaaagcttaaaaatgttcttaaacatgttct tatttttaccattttgttagcgtttttgtccattttcctaaaaaaattgg atgttttagagtttgcaaagccttaaaatattcttaagatgTTGAATTAC AACCTTCTTGCACCCTACAATCTTTaagccatcgaagctttatttaaaaa aaaaacgtgtacatttcAATCCTTTCATACCATAGGCATCAGGCATACAA GACTTAGAGGTGACGCTTGGTCCTACAAGAAGACATGTGATATCATATTG GGCATGGTCAAAATCTAATATGTCTCCCTCATTCATGATGTTTGTAACCA TCATCGATTCTAACCATCATTACCTAACGtatctttttcaacaaaataaa aaacatttttaatacaTATTTATTCTGTGCACCACCCCTCCATTGTTTTG TTCTGTCTTTGTTTATAACACTATCAACATTTTGTTTATCGTTTTGTTTA GCTAAGCCCCCCCCCTGATAACACCATTTTTAGCTCTAATTTACATGATA ATGTGCTATTGATAAATAAAAATGCCCATACTATTTGTATATAATTAGCT TCATTATTTTAATATATTCGGTCTCAGAATACGCATTTGATTAGATATCT AGGGATACTTCACCTAGTTTTAGGTTACCAAtttaaaatcaataaatatt tactgtctattctattgtattatattttttcttccaGTCATTTTTATAGA TTGGGAACTCAAACATTGAAATATtattattcaactttttttccataTAG ATTTTAAATATGTCAGTTCATTACATTTTAtcatgttttccttttttctc aggCTACTCTTATTGCAATTTTCTATGTGCCTGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012886TCONS_00012886Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012886-proteinTCONS_00012886-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000157supercontigsc0000157:289982..298366 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
81.09 77.15 139.58 147.99 8.05 8.17 12.55 13.39 15.78 15.59 14.95 12.55 12.35 12.42 13.91 14.77 23.79 20.06 7.24 10.08 13.61 13.9 39.45 36.23 35.12 32.41 9.14 6.77 23.11 25.7