XLOC_007237 (gene) - C. hemisphaerica

Overview
NameXLOC_007237
Unique NameXLOC_007237
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000157:206464..215805-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007237 ID=XLOC_007237|Name=XLOC_007237|organism=Clytia hemisphaerica|type=gene|length=9342bp|location=Sequence derived from alignment at sc0000157:206464..215805- (Clytia hemisphaerica)
AACTTATTAAGAAAAGATGTGAACAAAAAAAGAAAGTTGTATAAAAAATA
AAAGATATACTATGGCAAACATGAAACAGATACAGAATTAATTTCGCAAA
AAGGTATGTGATTTTGCGCTTTTTTAAAACCTAGTTTTAAAATTTAGGTC
CAGACAAGCAAGCTGAAACAATAAAAGATTAGTGTTAAATTACTGGTTAG
GTTTGTCCAAATCTTATTTCTTTTCCAAAAAGAATTGTTTGGCGAACAGC
TCATTCCCTGATGTCTTCACTAATCTATCCAATTGCNCTTATTTCTTTTC
CAAAAAGAATTGTTTGGCGAGCAGCTCATTCCCTGATGTCTTCAGTAATC
TATCCAATTGCCGCTTTAAGAAAGACGGATTGAGTCTAGTGCTACCTTTG
TTTTCATTTGGCATATTTTTCGAAATCCAGCGGTGGATTTTATTTTCAAC
CTGGTGTTTGTGTCAAAACTAAGCTGGGGTCACCCGTTTCAAATGAGAAG
TAAACTTATTTCCCTATGCAAGAGTTTCAACTTTTGCCCCTAGGAGGGTT
TCAACTCAATGAATTTTACGCACTGGTTTCTTTGGTGAATACAAAATTTA
GATTTTTGTGACCTGGGAACGAATCTCTCACCATTGCTACGATCGAGTCC
TGTAATAGTTAAAAATTATTGAGGTTGAGCCCATTGATGGAGGATGTCCG
CCTATTTGTCATTGAGTTGTTTGAGCTCTCAATATCTAACCCGATTTTCG
AGAAAGTTTTTTTACGTATCACCCTTTTAAGTACCTCGCATTGATTTTTT
TTGCTTACACCCCTCTTTAGTATCAAGTAATTTGTTCTTTTGAAGAAAAA
AAGGGGACCCACCCCTTACTCAGGTGCTGGTTATCAAGAGAAAATATGGG
TACATCACCCTGGAATAATGCTTTGTAATACCCAACAGTCAATTTCACCT
CACCGATATGTGGAAGAACTTTAAGTTAAAAACTTTTTTTTAAATATTAG
AAAATCGGATGAAATGAAATCGATTCAAGAAATTTTTCGGAAAATTGGGA
AAATTTTCCTGCTGATTTGCCAAAATCTCACCCATTTCTCTTAGAGGGTA
CATGTATTTTGTGGAGATGTACAGCATAATATCACGAATAAAGAACTGGT
TCGGTAAAATACACAGGAAGAAATCTTTAGCCGACGTTGTAAAAACTCCA
GATCATCATCATCTTTGGCTGATTTGGCCGCCAAATTCCCGCCAAATTAA
ACTTTTTGAAAATATGATCTCTTTTAGGGTGTTTTTGTATTTTTTTTTTG
CTGTTTTTACACCATTTTAAGGATAAATTTTTCAGCAAACGCTAATTTAA
ATTCCCGCCAAATTTAGTTTTTTCGTCCATCCGCCAGATTAAATTCCCTC
TAAAAAACTTTTTCGGCCATCTGCGCCATCCGCCAAATTAAATTCCCCGC
AAAATTTCTTCCTTTAAGGTACTTTATGTTCTTTGATATTTTTAACAAAA
AACTGCGTTTATAAATTGTTTGATAATTTATTCTGTTATTAAGTGTAATT
AAGAATTTAATCACAAAAAAGACGTTAATAAAATGTTTTATTACCCTCTT
TTACAAGAAATGCTAAGTTTCAATGGATAATTAACGTTTTTGTTTCAAAT
TTTCTTTAAATTATCTGCAAAGAATTGATCTATTTGAAATTTTTCTGCAT
CAAAAGTTATGGCTATTTCCTCATTAAAAATAGGGATAAAAAATTGGGCA
AAAAGTAACCATTTTCCAAATTTTTAAACAAGGTTCTCAAAGTTGAAATA
CTCTCCATCACAAAAGTCCCCCCTTTTTTCATCAATTTTTTCATCCTGAC
TTTTGAATTTTCGGATTCAGGAATAATTAACCCAACAGAATATGTATAAA
ATGTTATATTTTTGGTTGGCTACTTTCAGCAGAAATTTATAACTTGTATA
TACATGCCAAATATGAAAAATTCACTATGGTCAGAGCCCTTAATCAGTTG
CCGGGTAAGCGGTACAGCCAACTCTCTCTAATTCGAATCTTTCTATAATT
CATGCTGGAATCATAGAGGTATAAAGAAAGACAGGAGATGAATTTGTCGG
TAATTGGTCGTTAAAGTCTTTTGATTTCTTTTATGTAAAAAATCAAAAGA
AATTCTAGGCTCGCCCGATGAAATACGACTTTTTAGTAGAACTCAAGTTT
GCTCTGAACATTCTTACTATCAGCATGGAAGATTTCTAGCCTTATAATAT
ACGAGAATAAAATAAAATTTGGCTCCACGAAATAGGTTTGCGTTCAATTT
TGTCATCCATTAAATTTTGTTTTGAAAAGATATTTTCTCCAGCCAGAAAA
TAAAAAGTTCTTTTTAAGCACACACAATTTCAGACCCAGTTTGTAGACAA
AAAGTCGCTGGAGAATTTTGGAGAAAAGTATTAAGCAATAGAGTTCACCT
TAAAGAAAATGTTGATCGAAAAATCTTGTCATTTGATGAAAGATTGCAAA
GTTTACAGGCCCTTTTTTAATCCAAATATTTTCACCAATTACACCAATGT
CAGAAACAATGAATCTCGTCTCATCTTATTTCCAACACTTAAGTTAGCCA
ATAAGATTTCACCTATCAACAAAAGAGCTCATTAAAAATGCACGATATAT
GAGATTATGAGCATGCATACCTCGTAACTTTTTTAATCGTAGGGCGAGCA
TGGTTACAGTAGCATACTTCTCCTGTTTCTTTATACCTCCATGCTGGAAT
ATTGGTCCCCTCAGCTAGAAATTAGTATAAAATACTTTCTATAATTCGAA
TCTTCCTCTGGTTCTTTGAAGATCGAATTAGAGAGAGTCAACTATTTGAT
AATGGTAATGCCAATGAGTACTAAATAATTATTTATTTTTCAATGTAAAG
CTCATTAAATCAATTTGTCATATTATGTACAAAAAATAGTCTTTTTCTGA
GAATGATAAAATTAGCACAAACACATACCTTATTGGAACTAATTTTCGCG
AAATACAATTTTTTGCAATTTCATCGACAAATTTGAAAAATCTCTAGGAA
AATGAAAGAAATTTGTCTATAAAATGACATAACCGCGAATATTATTTCCA
ATAAGGTACATTATAATGAATCAAAGGGAATGTTACGGAATAATACTAAA
ATATATAAAATTTGATTTTTTTAAATAATGCGTAAAGCCCTGTTATCAAA
TTTGCAGTTTTTAAGGCATGGTTAATTATTTTCTACTTCGTTAAAAACTC
ATAAAACTAATTTTGAAACCTTTTATTTAGATACCACCCGAAACTTCCTG
TCAATCGAATTAAGATATCCTGCAATTGCATTATTATAAACTGCTTTTAT
TTGCATTAGATCGGTAATTGTGGAAGATATCTTAACATATACTGCAAGTG
CAGGTTATGTTCTCGACCGTTAATTTTTCATACAAAATTTGATTCTCAAA
TTTGAATCAAAGTATAATGTACTTTTTATCAAAATGTATTTACAAAAAAA
GTCTAGAAAATCTTTGACTGAAATTATTCACCTTTTTTTGGCCATTGAAA
GGCCCTATTTACGCTATGGAGAAAATTTTCTAATCCAAAAAATCGATTTA
ATTCTCTTTACCTATTGCTCTTCTAATATAGTTCGTAATTTCACCCAAAC
TTTTCATAATTTTGACCGGTTGCGAGTCATATTTTGCTTCCGTCATATTG
AAATGTATCCATACACAATGTCTCATAATTTATTCAACATTTCCTTTACT
ACTTAGAAACTGACCAAGATTCAACAAGGATTCTGGGAACTCGCCTATGG
AATCAATCCAATATTACACCACAAAGTGTACCTTGGTGGGCAATTAAGCC
CGTTAATGCTGACAACCTGATCATCATCAATGAAGCAATGAAGTTCTTTC
AGATTGCCATCTTTGCAACTCTGGTGAATCCAGCTTCGGCTGCACCATCA
AACAGGTAATTCCCTTGACGGTACATAATCAACAGTGTCCTCGTGTTCCC
CATCCGTACACACCAACAAACTACTTATCAAATTCTCCAAATCACAAATA
TCCTGCCGTGTTTTGTAATAAATATCATCTAAAGCATTGTTCATGATCTG
AGCTTGGTTTTTCAGTAATTTAAATGCTACTATAAGTTCATTTTTACGTA
TAACTTGTGAGTCGTCATTTTGATGTTTTTGTATGAAATCTTGTACGTTT
TTACGACTCCGTGTGACATAACGATCTATTTGCTCCATTTTGAGTCCACC
ATAATTGTTATTTTTGTTGTTATGGCTACCGCCATTTAATTGGGGTCGTG
TAACGTTTGAGAAGTTGATATTTTTCGGGGACGTGTAGTGGCAATTACCA
TTGTTTTGAATACGCATATGTGAATCTTTGATTTCATCGTGACTTTTGGT
AGTGATTGATGTCTTCGGTTCCTTCTGGAAAAGATATTGTATATTGGATT
TATTCGTTGGCAAAGAACCATAGCGATTACTTGTTTAGAACACTCGAATT
ACAAAAGTCATGATTCGATTAGTCGAACTGAACGAACCCAATTTATAATC
GAATAAGATTTAAGCAGCTGATTTAAGGCATAATTAAAGGCATTTAAGGC
ATGACCCCTGCTTAAAATTTCAGTCAATCCAGGTTTAGCCTTGTTCTTAA
ATTATTCTTACTTTGCGGCGATTTTGACTTTGAGCCTGTTCTTATACTCT
AGGGGCTGAGTTAGGTCCCGTATGCGCATCGGCGTATAGTCATTTTTTCT
TTTGATCATGAAAATATAGTCCTTGAAGAGTCAGAAAACGTGTGTGGCGT
TATTTGGATCAGGCTCAAATTTCCATAATGGCGGATTTTAGATTTCAACC
CTTTTTAGCCCTCAAAATTAGCTTAAAACCCTGCATATTATATACCAATC
GATTAGAAATGTTATACTGATTAAGAAAAAGGTCAGAACTATGGTCTGAA
AATTTCGTTATCAAGAAATACGAAGTACTTACGTTTTCTAAGTTTTGAAA
ACGAAAGTACTTCATAGCTAGAGATAGAAAAATTTTCAGACCATGATTCT
GACCTTTTTCTTAATCAGCATAAAATTTCTGATCGATTGGTATATAATAT
GCAGGGTTTTAAGCTCAAAAAATATTTTTCTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGTAAGCCAATC
AAATGTTACAGCCACGCAAATTTGGAACCAAAAGTAGTCATTTCAAAAAA
TCAAAATCGAAAGTGCTTCATATCTCCAGATAACGAAACTTTCAGACCAT
GGTTCTGACATTTTTCTTAATCAACATAAAATTTGTGATCGATTGGTATA
TAATATTACTATGTTTAAAGTTAAAAAAAATTTTTTTTCAAGCAATAGGG
CTTGAAAGGGTTGAAAATCTAAAATCCGCCATTATGGAAATTTGTGCCTG
ATCCAAATAACGCCACACAAGTTTTCTGACTCTTCAAGGACTATACTTTC
ATGATCAAAAGAAAAAATGACTATACGCCGATGTGCATACGAGACATAAC
TCAGCCCCTAGAGTATTATTAAAAAGAAGATAAATTATTCTACCTCTTCT
TTGGTCTCCTTCTTTTCAACACTCTTCTTCTTTTTATTCTGTTCTTGAAT
ATTCTTCAAATCGACAGACACATTATCTATTTTGTCATCCAGTTCATTGA
ATTTGCTGCTCAAATCAGTCATCATATTTTTCATGTCTTCTATCATAAAT
TCTTGGGCGAAATAATTTCCTCCACGAGCTAGAATGAAGAAATAAGAAAT
GAAGTAAATTCAAAAACAGTTGGGTCCTTGTAAGTAAGTAAGTGTGCGAC
CGCAGTCGAGGACAACCCAAAGGCTCCCTTTTCGTATAGCTGTCTACCCA
GCTAGGATAGGGTGCCACTCCTTTACTTGGACTTCTCCACTTACCCTTAA
TCCGTCTCTTTAGTTGCTGAGCATCAAGCAGAGAGGCATCAAGTACCATT
GGGAATCTTTGGTATGATCCGGCTGGGGATCGAACCCACAACCTTGTGCA
CCGTAGCTGGATGCTCTACCTTCATGCTACGGTCGATTGTAGTAATCCGA
TCTTCTATAGGCCAAAACGAATTAGGCAAATCAGGGGCCAAAATTTATGA
TCAACCTACGACTCTTGCGTTGAGCCCTGTCCGTAACGTTATGAACTGCA
TGTTTTTTTATGTAAGCATTACATTTATAAGCATATGCAGGCTCAGTTTT
TTCGAAAAATAGCTCAATTATTTAAGAACAATAGAATGCTAGGCATAATG
CACGCCTGTTAAAGGGTAGTAGACATGTAATTGCCAGCGAGGGTATTCAC
TCATTGCCTAAAGGGCTACATACACTACACAGTATATTATCGGGCAATAC
ATATTCCAGCAATATAGGGGGTTTGTTTACAGAAAGAAAATTCTTTTTAA
AATTTTTTAAAAGCACCTGTTGTTTACTTCATACATTACGGGCCGCAAAC
TATATTGTCAAATGTTGCTCACCAATATATTGTGCAGTCTAAGTGATGGC
CTCGCTTATCTCAAGTATAACCGTTCGATCTAAATTGCTCACCGTTTTTG
ATTTTCCTCCATTCATTTACCGCATGAAACATATCGGTCTCCAATAATTT
TCCTTTGATTTTGTTCATCAAGTCTTGATGGGTGGTCCGGTCGTTTCGGA
AGCCTCCGATGAAAGATGCGGACTCTCCCGAACGCCGGATATGTTTGTTT
CGGTGTGCGTAATATTTGTACCATAACCCAATTGCATTCAAAGCGGTTAT
CTTTCGATGTCTTGTTAAATCTGTAAATTTGAAATGATAGGTATTGTGAT
TTATCACAAGCAAAAAGTGACGCTCACTTTTTTGGCAACATTTTGAGGCT
CGAGTGGTCTCAGAGTTTTAACTCAAGACAAAAAGTACGAGGACCTTTCG
TATTTTGTGAGCGCTAGACATTTTAAATGTGACCTGATAAATCAATGTCA
GATTCCCGTCACAATATGACATGCCTACATGACTTATTATACAAGAAAAT
TGACCTTTCTCTCCATTAAAACGAAGGTGGATAATTAATGCACCTTTTTC
TCCTTATCCCGGTAGTGTCCGCTCTTATTTTGTAAACTGCGGGAGTCAAG
ACTACGTCTTTTTATCGATCGTAAAAGGTCCGTCAAATCTAATTATCAAT
ACGCCCTTAATAGTACTTGACTGTATACTAGTAAAGGACATGTTGATTAT
TAGATTTTTACGGATCAGATACTTAACCTCTTCTCTTCACAGTCCTTACC
TTGGTTTTCAACGTAAGCTAATATTCTTTTCTCTCTTCTTTGCAACATCA
GAGCCTCATTCACCAAAGAGATGAACAGGGCCATCAAAAAGATCCCCACG
ATTGCAGTAATACCAACGCAAAATCTACCCACGGTTGTTTTGGGTGTCAA
ATCTCCGAAACCCACGGTCGTCATGGTTATAATCAACATCCATACTGTGT
CCTGTAGACAGAAAACGAAAGTGAAAGTAATTTATTTCATTTACTGACAC
AACCCAACTTTTTTAGGGATAGATCTAAGAGAAAATGTTAAGTAGTCACT
ATCAGCTATCAAATAGCATAGGATAATATTCAACACGATTTAGAAATATC
TTTCAATGAACATGAGAAATTTATTTTATTATCCATGTCGTAGTGCGGAG
TGCCTCCAATTAGTCTCCCCAATTATTTTTTCAAAGATTGTTTCTTAAGA
GCTCTGACCATAGTGAATTTTTCATATTTGCCGTGTGCAAAATATAGATC
TACCTGATGTAACCAACAATTACTTCAAAATTTCAATGAAAAAATTTGAC
GAAGAAGAAAATGAAGACTTTTGCGAAGAAGAGTATTTCAACATTGCAGA
CCTTATTTACAGCGAAGAAAAAACATTTTGAAAATTTTTTTGCGTTGAAT
GGTGTATCTTTAACCAAACTAAAAATAGATTTTCGGAAATTATTTATAAA
AGCTTCTTTGTCTCAATCAGTGTTGGCCGGGCTTGTAGAACATCAATAAA
TTAAGTTGGTCTCGCATATCATAACGTGAACTATATCTCATCATAACGCA
TCATATTTTGAAGCTCTATATTCAGGTCACATTTTCATGATTGTGACATC
ATCATTTGAAAATTTGTGTGATAAGGCAGGTTTGATCAGTTGATAGCTTG
CTTAAGTGTTTTTGAAACTTTTTGGATCATTCTTTTTGAATTACACACTC
TACAGCCCTTGAGATTTGAAGAGTTTGTTTCCACAAAATTTGGAGACAAA
ACCTCTGAATGATCTGTTTGATAAGGGCTATCAACAATTGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012902TCONS_00012902Clytia hemisphaericatranscript
TCONS_00012901TCONS_00012901Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000157supercontigsc0000157:206464..215805 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.43	1.52	1.56	0.75	2.38	0.42	9.3	8.16	11.44	10.86	4.17	6.91	6.12	2.5	6.54	7.42	4.16	5.04	3.95	4.08	8.18	4.7	7.48	6.51	0.97	3.12	4.01	3.39	0.6	0.66