XLOC_007331 (gene) - C. hemisphaerica

Overview
NameXLOC_007331
Unique NameXLOC_007331
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000162:363395..369914+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007331 ID=XLOC_007331|Name=XLOC_007331|organism=Clytia hemisphaerica|type=gene|length=6520bp|location=Sequence derived from alignment at sc0000162:363395..369914+ (Clytia hemisphaerica)
GCCCTATTTGTGTGGTTCATACCAAACTTTGAGTCTATTCCGTTGGGTGA AAATTGGTTAGGTTGCGTCCTCATACTAGAGTTTGTAAAGATACTGGTAA TAAACtggtttttggtattttctcaagatttcatcattagttttttctga tttttgcacaaGGATGTATTTCAGTAAATTAAATCccgctaaaattttca ttgtcTGTCGTTTGCCAAGATTTCGCAATAAgacaattttatgaaaatta tcACTTTTGCAGACTAAGGTTTTATAATCCTCTTTGTTATTAAAATAAGT GGTTAGATCTCACTAATGAAGGGCACCATTTCTAAGGCTGTTTTGATGAT AAtccattttaatttctttttatcgTTAGCTTTATATAAAAATGAACAGC AAGAAAATGTTTTGGAGACCTGGTCAAGAAAAACCAGGATCAGATGTCAA AATTGATAAGACTGAAAATGGTGAAGGTTCAGGGACTTTCATTTCTTTTA ATTCCAACGTGTCCTTGTCAATGCAGCAGCAAAAACAACGCTTGCCTGTT TTCAAATATCGTAACCATATTCTGTATGCTGTTGAGAATTACCAAACTGT TGTCATTTCTGGATCTACAGGATCAGGTAAGACCACTCAAGTTCCTCAAT ATTTGTTTGAAGCTGGTTGGAGTAATGAGAACCAAATCATTGGCATAACT CAACCTCGTAGAGTAGCTGTTACCACAATTGCAGATAGAGTTGCTGAAGA GATGGGAACTTTCATTGGTCAAACTGTTGGTTTCTCAATTCGGTTTGAGG ATTGTACAGATAAAGAACTGACAAAAATCAAATATATGACTGATGGATAT CTTGTGCGAGAAATGATGTCAGACCCTTTGCTTAACAAATATAGTGTGAT AATGTTAGATGAAGTCCATGAAAGAACTTTGTTCACCGACATTGTTATTG GCTTGTTGAAGAAAGTCTTGAAACGAAGACCAGATTTGAGGCTCGTTATA TCATCTGCTACTCTAGATGCAAATAAatataaagaatttttcaacCTGAA ATCATACTTGAATAAAAAAGAAGATTCATCTATTGTTTTGAACGTTGAAG GACGAACATTCCcagttgaaatattttataccCAAAGCGCGATCCCCAAT TATGTCAAAGGCTGTGTCAATACAGTATTAGATATTCATCAAAACGAACC TGCTGGAGATATCCTGGTGTTTTTAACTGGTCAAGATGAAGTTGAAAATG TTGTAGATTCCATAAATCAAGAAATGCAAAACTTAAAAGGAACTAAAGAT AGATTGTTAACTTTACCGCTCTATGGAGGATTGTCGATTCAAGAACAGTT GAAGGTTTTTCAAAGGACACCCCCTAATACAAGGAAAGTAGTTGTGTCCA CCAATGTTGCTGAAGCTTCAGTTACCATCAATGGGATTGTGTATGTGGTT GATAGTGGTTTTGTGAAATTGAGAGCTTACAATGGATCTACAGGTTTGGA TTCTTTAGTCATCACGCCAACTTCAAAAGCATCTGCAGATCAGAGAGCTG GAAGAGCAGGCCGAGTAAGATCTGGTAAAGCTTTTCGTTTGTACCCAGAA GAAGAATTTCAAAAGCTTGATCAGTTTACCGTTCCTGAAATGCAGCGATC TAATATGGCTCCTGTTGTGCTTCTGTTGAAATCCCTTGGAATAAGTAATG TTCTGAGATTCAGTTTTCTCAGCTCCCCACCAGCTCAACTGATGGTCCAG GGAGTGGAGCTACTTTATGCGTTGGGTGCAATTGATGAAAATGCCAATTT AACTGAACCTATTGGAATCCGAATGGCAGAGTTCCCAGTAGAACCAATGC TTGCAAAGATGCTTTTAACGTCAGGAGAGTTTGGATGTTCTGAAGAGGCT TGTACTCTTGGAGCAATGCTACAAGTAGAAAATGTGTTCTTTAGTACCTC TAATAAAAAACGTGAAGCTGTCATgacaaagttgaaattttctgtcAAGG AAGGTGATCATTTGACTCTTATCAATGTGTATCGTGCTTTTGTAGAAAAT AAAAGGAATGCTCAATGGTGCCAtgtacattttttgaatttcaaggcTTT ATCACGCGTAGAGAAGATTCGAAACCAATTGATATCGTTTTTGAAACGAT ACGATATACCGATTGTCTCTTGTGGAAATGATCAGGAAGTAATTCAGAAA TGTGTTGTTTCTGGTTTCTTTGCTAATGTTGCCAAATATCATCCCTCTGG TGAATATCGAAGTATTCGTAATAATCAATCACTGCATTTACATCCAACAT CAGTTCTTTCCACAGAAAGAAAACCACCAAAGTTGTTGATTTTCCATCAA GTTTTATGCACATCCAAAGATTTTATGAGAGATGTTACTGTCATTAAATT ATCATGGCTTTTAGAATTAGCATCATCATATTATGATTATGGAACTGATT ATGAAATTGCTACAAAGAAATCTCGTTATGATGAATAATTTTATATTAGA AttctttaaataatttttctctttttaacaaTGAAACATCTTGAGCTTTT CTTTTTGGCTTTACTTTCATGTCTCTCCCTTTGATGGTTTTCATATAGGA TTGATTATTTATACTAAAACTTATAGTTGAGCAATTGTTTTGCCACTAAA GTACAGTTATAATGAAGTACTGTTCGGAAAATGATTCGTTTTAATTCGTT GTTATGTTTGTTTGTcatatgtttttgtttttttagggCTAAATATGAGA ATAACAAGGcagaatataaaaaaattgaagactTCGACAGAGATGCCAAC AATGACATCCGGAAAGTTAAGAACGTCAGAAAGGCTGAGAATATCTGAAA GGTTAAGGACagcagaaaaattgaaaacccCAGAAAAGCCAACACAATCA AGAACAAACATTTTTAATCTTCCACAAGAGATTGTTTTGATTATTGCTGC CTATTTGAACCTCGATGATGTGAAAGAATTCAAATGCACTTGCAAATATT TCTATCAACTGATGGGGTGTAAGCCTGTCATGGGGCGTATGAAAGTTATC CCTTCTGCTTTCCAAAACCAACTGTTAACATTTTTGACAAATAATATGGG TGGTAAATTTGTCTGCCTATATTTGACCAATATTGAACTTGATCATGTGA AAAAGATTTTACGGTATGGCCCTAATCTTACTGGATTAGGAATAAAGATA CAACATTTATACAAAGGCTTAGAGGAAGTTTGTCCCAATTTAGAATATCT ACAACTAGATATTTCAGAACCTTTTAAACATGCCGGTCGCAGAAAATtgt ctttttatttcaattgtTTGTCAGAATTAGGAAACTTAAGTACCATAGTT TTGAGTGGAAAGTCCAACAATGATAACAACCCAGGTCTTTTACGAAATGA AGAGAGTATTTTCTCAAGTGATGCTATTCTGTCCATCATTGAACATACAC CACAGATCAAAGCAATCAAATTTCAACACATGCATCTTCTTGTTAGAAAT CAAGATGTGTTTTCAAATTGTATGTTGGCTTGTGATCATATTAGTTTCTG GTCATTTTACCATGTCACCACTTCATGGACCAGATTTAAAATACCTTCCA AAGTGAAAAGTTTGAACTGCCAATTTACAAACTTTGTGCCAATCGATGCA TCTCATAAAAACTTAGATAAAGTGATCATTATCACCAAACAAGCAATCAA ACTTGACAATGGTGCCATCCAAGTGTTGCCAAATGACCCtgaaagtttgt tttggacattgTACGCAAAGATCAAACAAGGTATTATATCGGTGGAATCT GTCGATTACAAGTTTTTTCGTGTCCAATTATTCAATATGCCATATTGTAC TATTTCAGGTTTTCTTGATACAGATATCAACGGTGTGGCTTGTTCCATAT CAGAACTTTACATCAATGAACAAAACACCATCAAGTTAAAGGGCATCACT TGTCCACAAACCTTCAACAATAACAGACTTGTTGCCCTCCTATCTAAAGT TCATAATTTGAAGACACTGGTACTTGAACATCTCAATGACGTAACTGTTG ATTTTATGGATGAAGTCGAATTTGAAAATATGGACACGATGATTTTGAGA AGTtgtaaaagtctttcaaagtctaaTGTTGATGAAAAGTTGAAAACTTT AGAATCGCAACCTTCTTATGATGTCGTGGTACGCATGTAAAGTATTTTTC TTAAGGGGGATGGTTTTTagattcaaaatttcattgaagcCTCCCAGGAG TTTCATTTGAACTTGAACCTTTTAATAAGCGAATGCCAGCTagcaaaaat tatttgaaaagacTCCAGTAGCTTTAACGAATgtgaaaatgaatcaaaat taaagtgCGACTTGTTAATGGTTGCAAATcattcaagaaatatttttgtt tgacTAAAAATTGAACTCAAAAAAATGAATAGATCCATCCTGCCTCTGTG ATCACAATATAATTATTGTCTGTTTAGGAATTTgtaaattattatatttt tgtaactaaaaattattttctactCACATTGTTTAAAATATGTTTCAACC TTGCTCTTCCATTTCCTTCTCTTTCCTGGTTCATGCTTTGCTCGTAATTC ATTAAGAGATATGATTTTGATAACTTTGtaagttttttcaaaaccaTGTA GGTCTGAAGTTTCTCTACTAAGTACATTTTAATATAATGAAGTTATATCT TCTCATAACTTACTacatcttgtttttttttcagtgtcaaaaaatgaaaa agatgaaattaCAACAATTGCCAATACCAGTTCTGTCCTTCTGATTGCAT TATTGTTGCCAACAAAAGATGTTTTGAATTTCCCAAGGTTGAAGAATTGC TATTCACCATAGTTAGGCTGTAGTTttattcatttcaaatttcatttcgt tATTTGTTTGGGGAAGGAAGAAAGTACTCGATGCCAATAATANTGATAGT TAGGCTGTACTTttattcatttcaaatttcataTCGTTATTTGTTTGGGG AAGGAATCAACACAGAAAGTACTCGATGCCAATAATAGAGCTTCGATTAA AATCCATATACTTCTATGACAAAATTGACATTGCAATTTTCTTGGAAGTT TAATCATAGGTTGATTTCTTTGTTTACAGGGGAAGATGGATAAAATAAAA CTTCAGAAATTGCCGATACCAATTTTGTGCATGATTGCGTCCTTGCTGCC TACAAgtgatgttttgaattttcgtctggtatgcaaaatattttatgaag TGACGTTATGTAGAGAAGTATTAAAACAAATCAAAGTAAAGGCAAGAAAT CGAAGTTACAAgccttttaaaaagtttttaacggAATCGTTATCTGGTGG AAGGTTTATTCATCTAGATTTGTTTTTAGCTACTGGAGCCACCATagcaa atattttaaatcttaCACCAAATGTTAATAATCTAATCATCAATATCAAA GATATAAAATGCTTCAAAAGTCAAAAGCTTGATTATCTTCATGCTTTAGT TTTGGTCGATAAAGATCTAATGTACTTTGATAAAATACCCGAatctaaat attcaaaatattttcaaccgcTTTCAGAACTGTCCAGTGTCAAAGATTTA TCATTAAAATGCCAAGGACAGTCTTATAAGTCAAACCTTATCCAAATTAT AATCAAATCCCTGaaaaatgttcgaaaaattCACTTGGAATCCCTTATCG TTAATAACTCGGCACATTTTGAtgaatttaaagattttctatCATCTTGT CGCACCATAACCTCCTGGAGTTTTTTCGATGTTCGACTGGTGAAGAAAGG AGTTCGTCTACCGGAGACTGTGACAAACTATGAGTGCACCAAATGTATAT TTTCGTTAATTGATAAACAACATTGCTCGTTACAAAGACTTAAACTAGCA TCTCTAGTACCGTATGTTGataaaatttggaaagaaaatagttttCGTGA TTTACGATATTTAGAACTTCAAAATTGTTTCTTCTATTTCAACCCATTGG AAAGCTGCAAGAAGTTGCATACTTTGAAATTGTTGAGATGTCATCTACCG TTCTATTATTTAATGAAATTATCAACAAATGTTAAAGATAATTTGAAGGA GCTGACCATACAGTCGCATAAAGACTTCAAGGATGAAATGCTTCTCGAAG TACTGAACTCTTTCAAAAGTTTGACAAGGCTAACGCTGATTAATATGAAT CTGCTCACACCGAGTTTCTTAACTAAAATCAAACTTTcgaaattaaaatt catttttataaaGGACAGTCTTAATTTTAATACTCGAGAATTTAGGGACC ATATTGAAACgatgaaaaatgaattatcaTTTACAGTAGTATTAGTGAAC GACTCGAAAAATGTAAAATCTTCAATTCTAAAACTATAGTCAgggaaatt ttagttttagaaaaacttttataacattttttaccAGCtagattttttat gttttcttaaattttgatagattcaattcaattcaattctaCTATGAAAT ATCAATTCCATACACATCAt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013121TCONS_00013121Clytia hemisphaericatranscript
TCONS_00013122TCONS_00013122Clytia hemisphaericatranscript
TCONS_00013123TCONS_00013123Clytia hemisphaericatranscript
TCONS_00013124TCONS_00013124Clytia hemisphaericatranscript
TCONS_00013125TCONS_00013125Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013123-proteinTCONS_00013123-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000162supercontigsc0000162:363395..369914 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
45.07 43.13 11.4 6.41 25.02 15.41 17.21 15.68 7.49 8.05 8.02 6.39 7.8 6.87 7.81 10.1 10.28 11.03 5.16 4.47 12.13 10.21 60.56 51.68 8.85 12.58 10.18 9.19 31.49 35.82