XLOC_007491 (gene) - C. hemisphaerica

Overview
NameXLOC_007491
Unique NameXLOC_007491
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000167:54013..58063-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007491 ID=XLOC_007491|Name=XLOC_007491|organism=Clytia hemisphaerica|type=gene|length=4051bp|location=Sequence derived from alignment at sc0000167:54013..58063- (Clytia hemisphaerica)
CAACTGGCAGACTGGGGAAGCGAAACTCGTCAGCTGATCAGGGCCAAAAG
AATATGTAAAAGGGACTTCCCCTTTATTCTTAAGAACTATTAAGTAAATA
ATCTATTAAGTCCAGGAAATGTAAATATAAGAGGAGACTTACTTGTTACT
TACTTGTGTGGTTGTTGGAGCATCCTGCTTCAGGTAAGGTTCTTGGTGAA
CCACGCCTCTGTGTGATCAATCTGTCGAGAGAAAAAGAATCTCAGCAGAT
ATTTTTCATGTCAATTATTGAATNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAGTTCTTCTTTGCATTGTTTGAGAAAGGTTGCAGGGAAACCATCGGGAC
CTGGTGCTGCAGTTTGGGACAGATCGTTGATTGCTTTTATTAAATCATCT
TCTGACAAGTACAGAAGCAAGAAGAGAGTGAAGAACGAGCTCTGAAGACT
CATATATTGTTTTATAAAGTCGCAGTCAGCAGCAGCGAATGCAATGCACC
TTCTTGAAATGTCAGATGCAAGGGTCACTAGGACTAGAAGGTGGGTGGGC
AGATTGACTTGGGAGGGACACAGAGACAGAGTTGTTTTCATTTTATTAGG
TATTTATGATTACTTTTTTTTTCAATATCATGATAATCAATAATATAATG
TATAAGTATAGTCCGGTGTTTTGTCTGGTGCCAAAAGTATCCCTCTCAGC
CACACCAGATCAGAAACCTTTTGTTTGGTGTTATAGTCCAGTGTTAATTT
TTCGAAGTTCTGGATACTGTGTGTTTCAAAATAATGCTCACCGGACTCAA
GTCCACTGTTGCAGAGGTGCCAACTCTAAAGTAGTGCTGAAAAACACTTT
TCAAAACACTTTTCAAAGAGAGAAACTTTTTTGTGGCGCACCCGGTAGAA
AGTTTACACACAGCCTAAATCTGACCTTCAGACCAGTTCAGACCGATAAT
TCCTGAAAAATTCTTATAAGAGAAATGTGCATTTACAATACAGTAGCTTC
AAACTCTTAAAGAGAAATATTAATAAAGATAATTCTCATACATAATTGTA
TATGTGAGTATTATCTTCTTTATAGTGGAGGTAAACTGTTTTTCGGTCGT
GTTGTTTTTTGTAATCTTTTAACTTTTTAAGCAGACTTACAGTACCTGTT
AAAATATCAAATTTCTTTTGATAGATTTAACTGACATAAAAATGGCGCAA
ATTGGCGAGCTCAGCTTAGCTCCTACTCGTGCTCCTGTATGCAGTGGAAG
TAGTTGTGAAACAATTGACGCGCTTCACAAGACGTTTTCCTCATTATCAT
TGATTGGAAGTTTTGTTGTGTTGGTCTTAATTCTCATCCTAAAAGAATAT
CACATGGATGCTCAAAAGATGATCTTATTCATGGTCTTGTCAGCTTTCAT
TGATAGTATTGCTTATTTAATGGGTGACGCTGAAACAACACATGGTGCAA
CCTGTGAAGCTCAATCATTTCTCATGCAATATTTTGATTGGGCTACGTTA
TTATGGGTGACGATGATCACAACAAATTTGATTTTAATCATAAAAAATAA
ACAGTCACCTAAATATTATTATATTTACCATGCCGTTGTTTGGCTTGGTG
CTTTGTTTTTTGCTATTGTCCCTTTCTTTGAAAACACATACGGTCATGCA
GGACTTTGGTGTTGGATCAAGAGAGAATATACAGGATATAGGTTTGGAAC
ATGGTTCGGACCTCTATTTTTCATATGTTTTGGAATGTGTATCACTCTTG
GCTATGTCACCTATTCAGTATATCAGGCTACTCAAGCCCAAACTGGAGTC
TCTGTTGCAACCGAAAATATCAACAGAAGCTATCGAAATGAATTGAAACG
ACTTGCTTTTTATCCATTGGTTTATATCATTTTGAATATTCCAACCTTAG
CTTATCGAATCGAAGATGCTTCACATCCTAATAAGAAACCCAATTATGGC
ATCTTGGTTGTATCTTCAATATTTGGGCCTTCAGTAGGAGCTGCTAATGC
TATCATCTTTGCTACAATCAATTTAGGTTCGATTCGGAACCTAACATGGC
CAATGATCAGAAATAATGTAATATTGTTGTTCAAACGTGAGACGCAAACG
CAAATCGAACATAATGTTGTTCTTGAAGAAGGTCCACAAACAAGTGATTC
ATCAGAGCAATATCAACCGATGCCTTGATTTTTTTTTGGCAAAATCTAAT
TCAGAACAGTACAGCTTCTGGTTACACGAAATGTTGTTCTTATGAAAAAG
GTCCAGAATCAACTGAAGCCAGTAGGCGATATCAACTGATACCTTGATTT
GCTCTGATAAAAACTGGTGATGAACAGTATCTACACTGAAATGACAGTGT
AATCTTAAGATTTATATTATAAAGCTATAATCAATATATTTTATAATTAT
AATAAAGGGTAGTCATAGTCAGCAAAACTCTATTGAAGTTAGAAGTCTAT
TGAAGTTAGCTCTAGAAACGGTGAATTAGCCCGATTTTCTACTGAAGGTC
TTTCTGATCTTTTTTTCGGACAATAATTGGAAAACTATTGCCCACTAAAA
ATTTTGTTTCATTATAAGCATTTTGTTTATTTGGCTTATCTGATAATGTT
TAGTAATAAGGTCCGGGGGTTGGAAAATTTTCGAAAAATTAACAAGCGGG
AGGCCGTTTATTTGGAACCTAGGACTACCATATTTCATAAAATATATCAT
TTCTGATCATTTTGGTATTCTAACTTTCGCTTTCAAACTTTCGCTTTCAA
ACTTACAAAAGTACGAAAAGAAAAAGACAGGAATTTTTAAATGAGAGTAA
AATATAAAGTATGACATTTTTTTAAAAATCGAAGAAAATTTTTCAAGTAG
GTCCTTCTAAGAATCAACTATTCAGCAAAAATCGGTCTCTCTAAGGGTCG
GTTTTCGGAAGTCCCGTCCGCACATACCCCTCATCCACCAAACCTAGTAC
TCCCCCGGACATCATTCCATTTCATAAACAATGAAAAGACAATACTTCGC
TTCCACTGTAAGGGACAAGCTGGAGTTTTTACAAGCTCTCGTTTGATTTG
GTTGGTCGTTAACCTGTAATAAAACAATTTTGTTACTTTTTCTAAAGAAC
GCGTCATCTCTATTACTTCAAATAACCAATCAATTAGTGAAGTCTCTTAA
AAAAACTCCAGCCCATCCCCACTGTAACGGGTATGCAGGTTTATTATTTG
ACTTGTCACATGTTAACAATCTTAATATTAATAGACAAGTGTCGCTTAGC
AATGCACTTTAAGTATTTAATTCAGGACTCAAAACGTTTATAATTTCCTC
TTATAATGATATATTTATTAACATGCAATACGGACCACTCTTTGAAAGGA
TCAACCGATTTGATATCTATAGAGTCAAATTAAACTTTCTAGACATGAGA
TTTTTATCCTAAAAGGTTAAGAAATGGACCAAAACTATCCATAAACCCTG
CGTTATGTTTTCCTTTTATGCTTTGAAACCATCTTTTTATCCTTGTGCTT
TATCCAATTTGGAAAAGCACATTTTCGCACTGATTTATACCCCTAGAAGT
TTTTTATTTCCAAATTTGCTTGTAGATATTCTTCCACTGCATTTTTTATT
ATTTATAAAATAAAAATTTTTTTTTATAAAACTCGGTATAAATATTTTCT
TGCATTTTTTTATATTTTCATTTCTAGATAATTATTGCATTGATTGATTG
ATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGAT
TGATTGATTAGCATATTATTTCATATTATCCACGATTTATATTAAATTGA
AAATGTGTATTTAAAAAATAATTTTTCAGTTAATCGGTAATAATAAGGCA
G
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013409TCONS_00013409Clytia hemisphaericatranscript
TCONS_00013408TCONS_00013408Clytia hemisphaericatranscript
TCONS_00013407TCONS_00013407Clytia hemisphaericatranscript
TCONS_00013406TCONS_00013406Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013409-proteinTCONS_00013409-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000167supercontigsc0000167:54013..58063 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.17	2.03	6.57	6.93	7.14	5.82	6.11	5.71	4.24	6.09	4.14	2.9	18.99	7.83	4.66	6.4	5.48	5.38	7.71	9.59	5.72	5.86	5.73	6.96	9.89	7.39	5.4	4.55	3.85	3.86