XLOC_007823 (gene) - C. hemisphaerica

Overview
NameXLOC_007823
Unique NameXLOC_007823
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000175:428962..434079-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007823 ID=XLOC_007823|Name=XLOC_007823|organism=Clytia hemisphaerica|type=gene|length=5118bp|location=Sequence derived from alignment at sc0000175:428962..434079- (Clytia hemisphaerica)
GGCCATACTTGTTGTGTGTCTTTTCAAGCTGAAAGAATTGAATTCCCTTG TAGCTCCTCCATCTGAGCTCTCATTAAAAATGACCAAAATTCTCATAATA ACCAAAACTTACCAAAAGTTATAATAAATTTAAAGTTCCAGAATAATGGC AACTTTTCCAATAATTGATGTATCAGCATTGTCTGAAAAGTATTTGGAGG GAGATGGCTACCTGCAAGACATATCAAATGACCCAATAACCAAGGATATA TCAGACCAAATTATCGATGCTTTTTCTCAGTACGGGTTTATTTACATCAA AGGACATGGAATACCCGAAAACCAAATCAATGGAGTATTTGAAGAATCAA GAAACTTTTTTAAATTTGATTCTGAAACCAAGAAAAGATTTTCAAGAACA AGTAATGATAATTGGGGATACGTTCCATACAAAGTTGAAACTTTCGAGAA AATAAGACCGTTCGATTTGAAAGAGTGTTTTAATTATCTACCACTGACTG ACAAAACTCAAGACATGAACGCGACAACACCGGACTTTATTTCTAAGAAC ACATCTTTTTATGGGGTGTGTAAAAAACTTGGGGTGCTTCTAATAAAAGC AATTACACTGGGTCTGAACACAGACGATAAAGTAAACTTTTTATACAACC ACCACAATGGTATTGGGAATTTCAGCAAGAATGCTACAACATTACGATTA CTTTATTATCCGGCTATTGAAGATAGCAGTACAGTTCTGGAACACCAATT GAGATGTGGAGAACATTCTGATTATGGAACAATCACATTGTTATTTCAAG ACGATGCTGGGGGACTACAGGTTTATTAAATTAATATTAGATCTTTTTCC CCAACCTATTTTTTCTGATTGTAGGATAGGACAGTACAAAGGGGGTCTTT TACTCACAGTAGTATAATGGTTTGAAAGGCTTCTTCCATAAAAATCTATA CTCACGATATTTGAGTATATCGTTATGGTTTTGAGTATATATATGCACCA TTGCAATGTCTTCTGACATTACATCACGGACCCAATAGCTGATTGGTTGT AAGTGATGTAAAATTAATTAATACGTCACTTTCAACCAATCAACTTTTGG TGTCTGTAGAATACATTGCAATGGTGCATATCATGAATAAAAAAGTTGCT TTAAAATTCCAACATTATGCCAATACCTATTACACGAAATAAGTCTAGAC ATGTGATTACCACAAATCAAGAAATTCTGTATTACTAAAATCAGCCGTTG CGTCCTTAAAAAAGCAAATAAAATTTGTGTAATTGTGATAATTTCAAGGC AGTTAATTATGTGTCTATTTATTTTTGTGTAATAAGGTAGTCTCATCATT GCCTTAATGTTATTTCAAGATGATAATGGGGGATTATAGCTGTATATACA CCAATCAACCCTTTATGGTGCGGTTGACCCCTGAGAGGGTTGGTAATCAA TTCACATGGAAATGACGTCTAAGTTAAATTTGTCTATGAGAATGTCAATT CTAGAATATCTGATTGAAAGAGGCTATTTCACTCTACTGCTACTCTACCG CAGTGTGAAGGGAAAAGATTTTTTCCATAAAAATATTTGTAAGAAGGCCT TGTTGAATAAAAAACCTGAAAAAACTTTAACTTTTATAAGAAGTCAGCCT GTCAGTCAGTTTGAAGGAATACCAGATATGTCATATTTGTCTAAGATTAG AGTGGATATAGATAGAGGAAATTTTATCGACCACCTTTGAACTTTTAAGT TACTCCTCTAGGATCGAATAATCGAATAATGTCCTCCTTAAACATGGCGC TAGTAAATACTTTTTTTCAAAATAACTCAATATTTTGTTTTACTTTCAGG TTGTTTCACCCAGTGGTGAATACGTAGATGCCAAACCAATCCCAGGATGC ATTGTGGTCAACGCTGGTGATATGCTNTCAAAAGTCACAATTAGTGTGAC ATAAAACCTACTCCTTCCTCTAGAATGGCCATACTTGTTGTGTGTCTTTT CAAGCTGAAAGAATTGAATTCCCTTGTAGCTCCTCCATCTGAGCTCTCAT TAAAAATGACCAAAATTCTCATAATAACCAAAACTTACCAAAAGTTATAA TAAATTTAAAGTTCCAGAATAATGGCAACTTTTCCAATAATTGATGTATC AGCATTGTCTGAAAAGTATTTGGAGGGAGATGGCTACCTGCAAGACATAT CAAATGACCCAATAACCAAGGATATATCAGACCAAATTATCGATGCTTTT TCTCAGTACGGGTTTATTTACATCAAAGGACATGGAATACCCGAAAACCA AATCAATGGAGTATTTGAAGAATCAAGAAACTTTTTTAAATTTGATTCTG AAACCAAGAAAAGATTTTCAAGAACAAGTAATGATAATTGGGGATACGTT CCATACAAAGTTGAAACTTTCGAGAAAATAAGACCGTTCGATTTGAAAGA GTGTTTTAATTATCTACCACTGACTGACAAAACTCAAGACATGAACGCGA CAACACCGGACTTTATTTCTAAGAACACATCTTTTTATGGGGTGTGTAAA AAACTTGGGGTGCTTCTAATAAAAGCAATTACACTGGGTCTGAACACAGA CGATAAAGTAAACTTTTTATACAACCACCACAATGGTATTGGGAATTTCA GCAAGAATGCTACAACATTACGATTACTTTATTATCCGGCTATTGAAGAT AGCAGTACAGTTCTGGAACACCAATTGAGATGTGGAGAACATTCTGATTA TGGAACAATCACATTGTTATTTCAAGACGATGCTGGGGGACTACAGGTTT ATTGAATTAATATTAGATCTTTTTCCCCAACCTATTTTTTCTGATTGTAG GATAGGACAGTACAAAGGGGGTCTTTTACTCACGGTAGTATAATGGTTTG AAAGGCTTCTTCCATAAAAATCTATACTCACGATATTTGAGTATATCGTT ATAGTTTTGAGTATATATGCACCATTGCTATGTCTTCTGACATTACATCA CGGACCCAATAGCTGATTGGTTGTAAGTGACGTAAAATCAGTGAATACGA CACTTTCAACCAATCAACTTTTGGTGTCCGTAGAATACATTGCAATGGTG CATATCATGAGTAAAAAAGTTACTTTAAAATTCCAACATTATGCCAATAC CTATTACACGAAATAAGTCTAAACGTGTGATTACCACAAATAAAGAAATT CTGTATCAGCCGTTGCGTCCTTAAAAAAGCAAATAAAATTTGTGTAATTG TGATAATTTCAAGGCAGTTAATTATGTGTTTATTTATTTTTGTGTAATAA GGTAGTCTCATCATTGCCTTAATGTTATTTCAAGATGATAATGGGGGATT ATAGCTGTATATACACCAATCAACCCTTTATGGTGCGGTTGACCCCTGAG AGGGTTGGTAATCAATTCACATGGAAATGACGTCTAAGTTAAATTTGTCT ATGAGAATGTCAATTCTAGAATATCTGATTGAAAGAGGCTATTTCACTCT ACTGCTACTCTACCGCAGTGTGAAGGGAAAAGATTTTTTCCATAAAAATA TTTGTAAGAAGGCCTTGTTGAATAAAAAACCTGAAAAAACTTTAATTTTT ATAAGAAGTCAGCCTGTCAGTCAGTTTGAAGGAATACCAGATATGTCATA TTTGTCTAAGATTAGATTGGATATAGAAATTTTATCGACCACCTTTTAAC TTTTAAAAAAGTTACTCCTCTAGGATCGAATAATCGAATAATGACCTCCT TAAACCCATGTTTAGTAAATAGTTTGCTAGTAAATACTTTTTTTCAGAAT AACCCAATATTTTTTTTACTTTCAGGTCGTTTCACCCAGTGGTGAATACG TAGATGCCAAACCAATCCCAGGATGCATTGTGGTCAACGCTGGTGATATG CTTCAAATCTGGAGTGGTCAAAAATTGAAATCAACACGTCACAGAGTTGT CGTTCCTACTAATATCAATAAAGCAAGACAATCCTTAGCTTTCTTTTTAC ATCCAAATAATGATTGTGTGGTGGAAGATTTGGTAAACAAAGAACAGAAT GTAAAAACTAATGCTTGGGATTACTTGATGAAAAAGTTTGGAGAAACCTA TTGATGATGGAGAGGAAAAATCATCCAAAAAAATTCCGTGTTAGTTTCAC TCGCGTACATATTTCACTTGCAAGGAGGAGGGAGGCTCTGGTCTCTCCAG GCAACCTACATTAATACAAACACTAATGAGATATAGACGAAACCTAGAGA AGAATTTTCAACCTTTCATAGGCGAGCAAAAAGGATTAATTAAACTTGCA CCTCATTTTGGCTGACGGATTGAATCCAACAATTTCTTTGTTTCAGATTA CCATTTTTCGAATTCTGACGCGTAAATGTTAGTTCCAATCCAGCGATGAT GGTTTTGAAAATTATATATTCAATCATATGGTCATAATATTTGAGAAAAA AGGGAAATTCACCTGGAAGTTTTAAAACCACATTCGATTTGTAAGTGCTC TAAAGTAGGTTGGAAGGGTACAGTTTAACACTGAGTTTTAACATGAGACT TTAAGACTTAGGACCTTAGGGTCTGAGGATCCAAAAGTTCAAAAATGGTC CATTAAGGCTTCTAATATAGCCTGAAAGTCTATAAAACCGAGCCAAATTG AAATATCCGATTAAATTTAAGAAATGGCCCAAAATCGACATTCTCGCCCG AACTCCGAATTTCGTAAAACGAGGAAATAAGCTTAATAGCTCAATAGATT TCGACCATGAGCATGATTGTAGATGGGTGAGGGATAATACAAAGCTGGTC TGAGCTGGTTCGTTCTATATGTTTTTAAAATTTTATTTTTGATATCTAGA TAAAAACAATGTTAAACAATTTTGATGACAAAGTGGCTACATCAAATATA AAATTACATTACAGGCTGTTTTACGCCTTTCAAAGATCGTCTGTAAGGTG TGAAATTCATAGTATTTAACTGTTTTAGGCTTTTTAAAAATATAATTTTA TAATTGATTTTTATTTTTTGATATCATTATAATATATACTTCATACTTCA TATACAATTATCTTGTCAAGTAAAAACCAATTTTCTCCATCTATGTGAGA GTGTATACAAAATAGCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014004TCONS_00014004Clytia hemisphaericatranscript
TCONS_00014003TCONS_00014003Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014004-proteinTCONS_00014004-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000175supercontigsc0000175:428962..434079 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.92 1.8 2.82 2.28 17.25 12.55 8.31 8.05 3.44 4.77 3.39 2.81 3.21 3.87 3.77 3.53 6.35 5.76 2.84 2.66 5.15 5.1 4.29 4.46 5.72 6.06 3.28 2.35 4.83 3.99