XLOC_007964 (gene) - C. hemisphaerica

Overview
NameXLOC_007964
Unique NameXLOC_007964
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000183:314868..321900-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007964 ID=XLOC_007964|Name=XLOC_007964|organism=Clytia hemisphaerica|type=gene|length=7033bp|location=Sequence derived from alignment at sc0000183:314868..321900- (Clytia hemisphaerica)
GTTTTTAGGCCAATCAAATTGCTCCATTACATTACTTATAAGAAAAAGTA GGAAAATGATCAAAAGGTAGAATAATGAGATGTTTTTCTACGTTTAAATA AAGAATAAAAAATAATAAACAATGGATAGATTTTATTGGTATGATGGTAA CCTGAATGGTGGCAATGAAAGACAAGTCCACAATACAAAGAATGTACGGC TGTATGACGGAGATGATAAGGTTAGAAAAGAAGTTTATTTTCAGATTTCC TTCTTAACTTTTGAGCAGCTGAACCAAATCCCTTGTCCATATGGTGGTAC ATACCCCCTCCCCCCTTGTACGCGGAGAGAAATAGAAATGATGCCATTCA AACAATAGACTGACACTTTTTTATAACCACTGCGTAAGAACTACATGGTT GCTAACTCAAAATTTAAGTGTTTTTTTTTCTATTTCCATTGATAACAACA TTAAATCATATCACCAACGGAATCATAATTCTATAACAAATCTACTTTTT GAATCCTATTTATTTTGATTACTGTAAACACCTTTATAGTTTTTCAAAAG TTTGCAGGAATTATCTTTAGAGACGGAGTGGAGGGAGGAAAGTTTGCGAT GCCTTTTTTTCTGAAGAAGATTTTACCTTCATAAACTCAGTTGCAGTGTT TCTTTATATTTATCTAACTTTACCTATCTTCATCATTTTGCCTGTTGGAT CTTACTTTTTTTCAAGAACTGTTAGATTTTACTTTTTTTTCTATTTGTAG ACGACGTTTGATAGTGGTTTATTGACCTTAACCAATCTGAGGATAATTTG GAGTGATGAAGCCCAAAAGGTAATGCTCACTTAGTAATGTATCATTTGAT TTTAGACTTTGGAGCTGGATATTGTTAAATTTGAATTTATCTGTAATTCT TGGTTGGGACAGCCACAGAAGAAGCCTTTTGTATTAAATTAATAACACAA ACTTAGGTTTAGATATAAAGGATAGCTGATAATATTATTTGTTTTTCTTT AACTTAGGATAGGAAAATTGCATTAGAGCTGGATTTGGTGAAGAAGATAA CATCAGAATTAGGCAGCATGTTTAAAAGGTAAAACATAGAAACTGCTTAC TCGAGAGCTTTTTTACCTTACTTAAGAGATTATGGGCCTTTACTTAAGTC TCAAATTGTTTTGGAAACTTGGTGATCTTGTAATTATGATCTAAGTAGGC TAGAAAACGTATTTCAAATTTCGTCTTAAAGGATTTTGTGTGATTTCAAA TATCATCGGTTTTGACAACCTCCTTGTATGTCTTTCATAATTGCTCTGGT TTCACCTTTAGTGCAAAAACTTCAATCCACTTAGAAGCAGCTCCAAAGGA CAAACCATCAGGACCTAAAAGATCAAGCTCACATAATGTGGTTCGGTTCT CTTTTCGAGTAGGCGGCCAGGAACAGGTAAAGTTCGACATGGAAATCTCC AATCCTATACTTATCAATAGGCTAGAGAAAGAAATTTAAGTGCCTCATAG TACCTCAAATCAATTCAATTTCTGAACTTGTCAATCAATTTCATTGCTAG CGCTGTCAATCACATTTGACTTGTCAATCATTTTTAAAGTATAATAAATG ACTAAAAATGGTGTGAATTGGAAGAAAATCAATATATCACCAAATCTACT GAAAGGCCAGCAATATCTGCCGGTTATTCTTTTATTGGATACACAGCAGA ACACTTAAATGATTTACTAATAAAAAGTTCGTTGAAGAGATACGAGACAA TAGTTTGGCATTCGAGGTATTTTTTTATTGCAACCTCTTTCGAAATAATT TATTCTTTTACTTATGTAATTCGTCGTGTGATTCCATATACTTGGCCTAT TGATTTTTTTATAACATTAACAAATTAATGTTATTCATTTCAAATTTTGA TAAAATTGAATTGAAAGGCCCATCAAAACCGAAATAATTTCTCGAAATAG AAAGAATTATCTGCTAAATGAAATCACTCGCTTTTTTCTTTTAATAAAAC AGAATAAAATATCATGTTGTAATGATAATAAATTAAGTTCATTATGTAAT GTAATTCCAAATAGCTTGATTGGTCTTCCAGAAGAAAAAAAACCGTTCAT AGAGGGTGGAAGATATATTTTCCAGGGGTATCGAAAAAATCCTGAAAAAC TGCCGATTCCATGGGGTGAAAATTCAAAATGTTCAGGGGTAGATCATTGA AAAAATAATATATAATAATAATTTTTTTCTGGAAGAGCCCAATTTAAATA CATAATCGGTACACTAAGTAAGCAACAGGCGGGTGGTCTAACAAGTAATT CAATTAAACTTTTTGTATGATGTTTCTTTCACTGTATAGTTTACAAAGGA GTTGAACCAAGTGATAGCAGCAAAGGAATGGGAAATTCTGAAAGCAGCAT CAAACCAGTCAAAGAAAACAGCAGAGGTGATTATTTTGATCCTCCCATCC CCTTACATGGTTAGAATGATTAATCTTCTTGTTCTTGGGTGGTCTTTCCA TCCTTGAAACAAAAAAATAACTGGCTTTTTTAAAGCAGTTAAATACCTCT ATATCCATATAAAAAGAAATATCCCTTACTACACCTTCCCCTCCTGCTCT AAATACTTCATCAATAGAATCCGTTCAAAAACAAAAGAATGACCTCAAAT TTATGTGCACGTTAATTAGTTCAAATTCTATAGGGAATGACAAACAGGCC GACTTTCCGATCTGGCCGCCTACTTGCCGCCCAACCCTAAAAATGTACTC ATCTTAAAATAATTACTTTTCACGAATAGGCTAGAAAAAGATACTCGTCT ACAACTCCTCTCTCTGTTGTATGGGAATTATTGATATTAATCATTAACCA CTGTAAACATTTTTCTCTTGAAAGCTGGCACCACGTCATGTAGGTATTGG TGGCATTGAACGCAAAATGCAAGAAAAGTATGAGCAAACTGATCAAAGTA TCAACCAAGCTTTCAAAGACCTGGATGCCCTCATAGAAAAGGTAAAAAGG AACTCTCACCTTTTATTGTCTTCTCCGCATGTTCTCGTGTCTTAAAAGTG CGCTAAGCACGTCAATTTTTTTAACTAACAAACGCAAAATCTCAAAGCAT TACAATCAAAGCTTTATCCAAAATCGGCAAAAATCAGTGAAAAAATGATT TAGAAATTCATTACATTGAAGCCAGCCTATGCCTACCTTTATAAAAGACG AATTCCAAAAATTGGCGTGTGTAAAGCTCCTCAGCTGCCCCTAGTGCTGC CCGAGTGCTGCCCGAGTGCCAAACGGTTGCTTTAATGTGATTTCAGAAAA GATTACATGCTTAAACGTTTTAGGCTAAAGACATGGTGGTACTTGCTGAA AAGTTTTCATCCAAACTGAAAGATAAACAAGTTTCAATCACCGACGATGA AGTAGGTCCTTTGGAAATCTTTTTCTACTCCACATCTTTATATCTCCTGA TAAGGTGTTAGAGAGAAAGATTGTAGGTGGTGAAATGAGGGTTTAGCATC ATTTGTAGATTTTTATGCATTTTAGGTAAAAAATCATTTCTCAGGTTAAA TTTTCTCGTGCCACAGACTTGAAACCACCTCTGTGGTTTCATAAATACTT GTTTGACCTCGAAGTTGTAGATTTGCACTTTCTTACTATATTAAGAATAT GGGGTAGGGTTTTATAATTCTTTGATTCGATTATTTTAATTTTGTGACAT GGTTCAACTTCCTGTTTTGTAGACAGTGGCATTCAAATCCTATTTGTTAA GTATGGGAATCGAAAACCCTGTTACAAGGTATTTATCTAACTTAATTTAA CTTTAATATTCGAAATCTTTTTCGTTTGACCTTGAAAAAAACATTACCGT GTCATTCAGCCATCTCTGAATGTCTCTTTTTTTATTTGTTTGAAATCTTT TCGATATGATCTTGTAGTGACCAATCTTTCAAAACACTCCCCTCTAATTC AACAATCTCCTCAACCTGACGCCTTTAACCTAAGGTTTTTTCATGTGAGC CAAACTAAACTAATAATTTGGATTCGAAACTTCTGGAAAAACGTCCTTCT TGTCCTGTTCATATACAATGTTCTCTTACTCGGTTTTTCATGGTTCACTA ATTCTGAAGTTTTCTTCTTCTTTCTTGTAGAGAAACACACGGCTCAGGAG CCAGATATCATGAAGAACTTGCAAAACAACTTTCTACTTTTCTTAGTGGC TTTATTGAGGTCTGTATTATTGTCTCGACAATCTCTACATTTACATCTCT ACATTCATCTACACGATCGAAAAAAAATATTTTCAGAAACCTAAAGTACT CATTTTGGAGAATTTAGCAAAATTAGTTTTTACAAAAGCAAGGCCCATTA GTGGATTATCTAACTTTGTCAGAACAGTTTGAGGCACAATCATACTTTGT ACTCTTGTACTTCTATACTTCAGGAATTCATTTTCTTTGTTTTGTTTTTA GAAAGAAGGAGGCTTTATCACTTTAACTGATGTTTATTGTCGCTTCAACC GTGCCAGAGGAATGGAGGTATACATATAACATTCATAACAATAGAAGAAC GTTGGGACAGCGTTGAGTGCCGCCCAGGTTATATTCTAAACTACCAATAG ACCTATTGGAATTAAGTTCCCCAAATATTACTTTAGGCGTACAAACTTTC GCGAGCAGAGACTTTCGCTATTTTCTGCGATTTTCGCAAATTTTGGCCCT TTTCGCGAAAGTAATTGTCTTTAAAAATTCTAGGTAGGGCCATTCGCGAA AGTTTATGCTCGCGAAAAATTCTTGACAAAATAGAAAATCTGTAAAACTT CAAACTTTGAATAAAATGTAACTTTTATGGCACTTTTTAGCCTGCTAAAA GACTAATAAGTCAAAGTACAAATGTTTCAAGCCAACCCAAGAACTATTTG TCCCTCTAAGCCATTTTTTCATGTGAAAATTCTCAATCTTACGTCTTGAT TCGCGAAAGTTTACGCTTGCGAAAAATATTTTTCCGTTAAGTTTGTGAAA GTAAATGTCGTGAATTTCGCGATTTTTCGTCCTCGCGAAAGTTTGTAGGC CTAAAGTATAAGAATACCTAGAAAGTCCAGTATACCAGAGTATACCTATT TTAGGATAATATTTTTAAGTTTCTTATTTGACATCTCTACCGATGTATTC TTTTAGCTCATTTCGCCAGATGATGTTTTCCAAGCCGCTCAAATATTGGA AAAGATGAACCTTCCTGTCAGGTAATCATTTCGTTTATCCAATTAGGATT TTTTTCGGCGACATTTATTTCAAAGTTCAAAGTACAAAAAAAGGTTCCAT TACCAAATCGTACTATAGTTTTGACGTCGATCTTCTTATATGGACTGAGT TCTCTTCTCGGCTTTTGAATAAAAAAAATCAAAATTGATTCGGAATTCTG TAATCCAATTCACACACGTTGAATCAATTATCATTTTATGATGTCGGCCA TTAAATTAAAACTGGTGTAAATCGATTCATATCTATATCCCAGACAAATG AAGAATTTTTCGAATTGTACGAGTTTTCTAGTCACGCGATATTCAACCAT TTTTCATTCTGAAAAATCTACGTCAAATTGTAATTAATTTTTTTTCGAAA AAACTTTCCGTTGTAAAGCTCGATGAATTGAAATACGAATTTATGTAATA AATTTTGTAAGCATTTGAAGAGTGTAATAAGAACTTGCACTTTTTAGATA GATAAACGATTAATTGCACTCTCTAAAAACGCGCCAAATGAGAGAGAATA ACCTATGGTACGATTAAAACAATCAAAAAACGTGTGTGCCATTGGGCTCT TACAAAAAAAATTAAATAATGGGGGGGATATAACATTTTTTGGAAATATA TCCACCATCCATATCTACCCCATGCACAAAAACTTTCTGGAAGAGTCTAT TGAAAAATTGTTGGTGAATGAAAAAACATCGCTTTATTCTATTGATCTTT ACGGAAATAACGTGATTATAGCAACCTATCAAATGTAATTTCTTTCATTT TTTTCTTCATTGTTGATAGCATGTTCAAACTAATTTTTCGAGTTATCGAA ACTAGGTTTGCAAGGAAAAAGTGCTTTATTTTGACCCTGTCAACATTCCA AAAATGTTAAACACATCTATCTACATGTAGATTGAATTTATTACGGGCAA ACAAGGTAATCTGTAGGTTGGAAAAACTTTTTTAGACATCAAACCGCTTT GGGATGCCTTTGGTGCAATTCAATTGTTTTTGTCATTGATAGGTTGAGGA AATTCGACAGTGGAGTGCTTGTCATTCAATCAGTGTCTCATTCTGAGGAA GAAATGATTCAGAAAACATATTCACAAGTGGAAGAAGCAGGCTCACTGTC ATCAGAAGAATTAAGTCAATTACTCAATATGGCTCTCACCTTAGCTAGAG AAAGGTTAGTACAGTTGAAGTTTGTTTGAATCATACACAAATTGTAATTT CCCGTCGATAATTGACTCTGCAACTGCATAGAAAAATGCAAAAAATTCCT ATATTAAATAAATCCTGACTTTAATGTTTTTAAGGTTTGCAAAATCAGCA TTTTCAACATTTTCATCTTTTACAGGTTACTACTAGCAGAGCAATCTGGA AAACTTTGTAGAGATGATTCGCTAGAAGGACTTCGTTTCTATCCAAACAA ATTTGTTGAGATGGAGAGTACATGAATAAAACTTTCAAATAAATTTTTCT AAATTTTTTATACATCAATTTTATTTATTTTAATTATATTGTTATAATTC TTTTCCTATAAATAACTACATCCAATACCTCCTTATCGAAATAAAGCTAC CGAATCCTGAAAGTAGGTGATGTCGGTGATGTCATCTTCTTGGATACATT TTTATGGTCATCCTTATACGATTTGAATTAAACAATATTTCGGCCTGCCT AGTGCAGATCTTCATCAGGTCTGAACATATTAATTACTGATTTTATAATC TTGTGTTAGTTTTTTTAACTATTTTAGTTTACTTTTTCAAATTGAATTTA AGAAACGGCAAAACTTCTTCAACACTTGGGATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014248TCONS_00014248Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014248-proteinTCONS_00014248-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000183supercontigsc0000183:314868..321900 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
VPS36vacuolar protein-sorting-associated protein 36 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
44.83 40.97 24.01 22.69 67.83 48.99 48.47 51.81 31.13 42.53 30.13 19.57 17.84 20.93 19.67 19.07 28.55 29.22 10.99 15.25 20.02 20.76 48.34 49.49 21.25 24.3 34.74 24.18 36.77 36.79