XLOC_008003 (gene) - C. hemisphaerica

Overview
NameXLOC_008003
Unique NameXLOC_008003
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000185:248857..250731-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008003 ID=XLOC_008003|Name=XLOC_008003|organism=Clytia hemisphaerica|type=gene|length=1875bp|location=Sequence derived from alignment at sc0000185:248857..250731- (Clytia hemisphaerica)
CAAATGAATCAAAGATGAAGCATTTTTGTAACGACATGCTCCGACGAAAC
GTCATTTCTGTCTTTATCAGTCAACTCCAAATATGACATTATTTACATTT
CAACATTGTTATTAATCGAGGCAGAACAAAACGGAAAATGTGACGTCAAT
AAGTAAACAAGGGATAGTGTTTACTTTTTGATTAGAGGGAGTGCCACAAA
AACCTAAACACAAAAAATCATTTAAATACGACTGAAGGTCTAACGTTTGG
TACAGAGCTCACAAAGCTAGAGAACAGTGAAGACAAGACATCACAAATCT
ATTCTTTACTTTTTATAAACAAATTTCAAACACACACAAAATGGCTGAAC
GTCAACAAGGATACGGTTTTACTGCTGAAGTTTCAGAAAAAATTGCTGGA
AAATACGACTCAAACCAAGGTAATTAGAATTAATTTGTTCAGTATTATTT
TTTTGTGAATTTTAACCGACCTTTGGTACAAGCCTTTGAAATAATAATGT
CAATGTCGATTTTGTAGCTTGAAAGTATAGTGTCTATTGAAGCAATATCT
GAAACAGTTTATTAATTCCTACTCCTATTGATACAGATATCGTATTTTTT
AAGGATTTAGATTCAAGCAGTGTCAATTTTCACTCTTGACTTACACGTCT
TTTTTTTTTTAAGAAACACACTTTTAAGAAACATGAGGCTCAGAATGCCT
AAAAACTAAGAAACATCTAAGAAACATGCNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNAGAAACATGTAAGAAACATTTAAGGCTCAAAAGGCTGATTTCTTAAGA
AACATTGAGGCTGCTTGGTAAAACTAGTTTCTTAAAAAAAAAAACGTGTA
ATTTTATAATTTTTATTTCAATCTTATTTTTTCAGAACGTGAAGCAGTTG
CCTGGATCCGATCTCTTGTCCCAGACTCCGGTCTCGACCAATCAGAATAC
GGTGCTGAAGCGCTTGCTGAAAAACTTAACGATGGTACCATCTTATGTAA
ATTAGCCAACGCCCTTGAATCAAGAGCTGTCCCAAAAATGAACACAAGTA
AAATGGCATTCAAGAAAATGGAAAATATTAATTTCTTCCTCGAATTCTCA
TACCGTTTCGGATGCAACAAAACCGATATGTTCCAAACAGTTGATTTATA
TGAGGCAACGAACATGGCTCAAGTTGTTAACGGCCTCCACGCTTTGGGAC
GCAAAGCCAACGCTAAGGGAAAATCCGGTATTGGCCCCAAAGAGTCGAAC
AAGAACGAACGTAACTTTTCTGAAGAACAAATTCGCCAAGGACGTGACGC
ACAAATCGGACTTCAAGCTGGAACCAATAAATTCGCTAATCAATCTGGAC
AAAACTTTGGTAAAACGCGCGCCATCATTGATTAGAACGCATACTTAATT
TATTCCTTATTTGAATATGAACGCGCGACCGCACGCGTACGCCCTTCTAG
ACAATTCTTTTTGTTTTGTAATATTTTTTGAGTTCTTTTTGTTCTTTCAT
GTAAATAGATCAATTTTTTAACAGAAAAAGAGTAAATAAAATTTATTTGT
GATGTTTTGATAAGTCAACGTGAAATTGTCTACTTTATTGACTTTTCTCT
GTGTACAAATGACACAATTTGAAAAAATATAATGACTTTTGGCATCTGAG
CAAGAAGACAATCTGTTGATTGAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014307TCONS_00014307Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014307-proteinTCONS_00014307-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000185supercontigsc0000185:248857..250731 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TAGLN3transgelin-3 Homo Sapiens
TAGLN2transgelin-2 isoform a Homo Sapiens
TAGLNtransgelin Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.92	1.8	2.65	1.73	14.35	13.5	97.75	117	88.28	155.24	69.52	62.26	472.35	441.19	456.19	465.85	294.59	468.71	601.64	495.68	104.55	103.15	48.53	35.21	40.53	72.61	575.01	604.42	1624.28	1605.02