XLOC_008412 (gene) - C. hemisphaerica

Overview
NameXLOC_008412
Unique NameXLOC_008412
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000203:116553..122409+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008412 ID=XLOC_008412|Name=XLOC_008412|organism=Clytia hemisphaerica|type=gene|length=5857bp|location=Sequence derived from alignment at sc0000203:116553..122409+ (Clytia hemisphaerica)
TTGACACACAAGTCAACATGTCAACTTAGGGGACAGCAACACAACACTTT CACATGACACATACATCAATAATCATTTTCTCTTGAAACATAACGTACGA TTTTCGCgaaataacaatattttgatttttgttacaaacaagAAGATACT ACAATATTTTGTTGTATACATTGGCGCGTGATATTGAACATTCGACATTA TGATTTGCAGTGTATTTAACAAATCTTGTTCCGTAATGACAACAGGATTA ATGATTTTCATTCTCGTACTAACGACGCTTACATATTTGACTGACTGTAA GCCGACAACTTCTAACGACTTTGTAAATACGACGACGACTTTATGGACGA CAGAAGCAGTTAACACGACACATCGACCTTCAACGACGATTGACACTTTG TCGGATTTCCCAGAATGGGTCATTGTAAGTGTATTTGTAGTTTCTTTGGA ATTTTGTTTCGATAGTTTTTCGTCTGCAATACTGAGgtttcaaaattcac tttttcatttttgcgtagttatgacaaaaaaaacgaTTTAATAAACTCTT GATTAGCAGAAAAGGGTGGACATTGAAAATAATATACCGATGTTTATACT ATAGCCCAGCAGAGATTCATCACATCGACTTTTCCCTCGTGTATCAAAAT CAGTGAACATTTAATATAATAAGGAGCAGGACATTTTAGTCGGATCGTTG TTTTTGTTATTGCTCTCGATATAAGAAGCCAACCGATTTCCTTTAAACCC ATTTTGCTTACATCATCCTTGGAAGAAACCGAAAAAttgtttgtcaaaaa aaaaggttagaGATAGAGGGGCGTGGGTAAGAATAAGCCAAAAGCCGACA GTTAAAGTATACTTGGGTGGTCAAAGCCTTGACTGGAACCAATAAATGAT GTCTTTAGCTTAGAATTTAAAACCTATATTCTCGTTTAGGACTATTTGGT ACGTTATGGCTATATGGATGAAAAACGTGcctacaaaataaacaaaacac cTTTCAACGCTGCCGACAAACTATCGTACAAGCGTTCCGAACTCGAAGCA GGTTTACGCGAATACCAAGATTTTATGACTTTGCCGACAACCGGACGATT GGATAAACGGACTATGGAAGCGTTACATAAAAAACGATGCGGAATGCCGG ATAAAGTACGACGGGACGACACGACGTTTAAGATGTCTTTGACGCCGACG GGACAACGCAAGAAACGCGATTTGGTTTTACAGAAGGTCGATAAAAACAA GAAAGGCAGTGGTTTTGCATCATCGAAAACTACCAGAAGATTTTACTGGA ATATCAATCCAAAACCTAAATATGGTGGTTTATTGAGACCAAATATATGG CTCAGTTTGGAATATGCATTCAACCGGTGGGCTTCAGTCACTGACGCTGT ATTCATTCGTGGCGATCGCTTAAACTGGAGTGATATCTTGATCGGGTTCT GGACTAGTAAGATACTTTTTGTTGATATTTATATAATCTTGGTACCCTTG AATCTATACATACTTCTCTCATCATCGATAAACTTGAAAGACCCTCAGCT GAAAGCTGCACCTGAAGCTGTGGTAAACAACAAAATTCCATATTTTAGTT TGcggaataaaaaaaaatgtatttctcTAGTGGGAAAACTAAATATAATT TTGCACTTTCTTTTCAGAGGACCATGGTGATGGCAATCCATTTGACGGCC CCGGTGGTACGGTGGGCCATGCTGACGTCTCCAACCGAAACGTACATCTT GACGAAGAGGAAAACTGGGGTGCAAAACCTGAAGATATTTTCTTGTGGTT ACATCCTAGTAAAGGAACAGACTTCATTCAAGCTGCCATTCATGAAATCG GTCATGTTCTTGGTTTATCGCACGATAAAGACTCCGACTCGGTGATGTTC CCAACACTACAACAATTCCAACCACTATCATATTACAGCTTATCGACAAG TGACATGAACAGAATTAAATCGTCGTTTGGTAAGTTCCATGAAATTTATC ATTTATCATTGCGAAAAATAGGCCTTCTTCTCTATAACTCAAAATTGTGT TGCCCGAAACTGTTGTACaatatttttgagttcttttgcCCTGGTTGACA CAAATTGCAGAGACTTCACCAATGAATCGATACAAATAACATCTGTTTTC CCTTGGTGACGCNGACGCCGACGGGACAACGCAAGAAACGCGATTTGGTT TTACAGAAGGTCGATAAAAACAAGAAAGGCAGTGGTTTTGCATCATCGAA AACTACCAGAAGATTTTACTGGAATATCAATCCAAAACCTAAATATGGTG GTTTATTGAGACCAAATATATGGCTCAGTTTGGAATATGCATTCAACCGG TGGGCTTCAGTCACTGACGCTGTATTCATTCGTGGCGATCGCTTAAACTG GAGTGATATCTTGATCGGGTTCTGGACTAGTAAGATACTTTTTGTTGATA TTTATATAATCTTGGTACCCTTGAATCTATACATACTTCTCTCATCATCG ATAAACTTGAAAGACCCTCAGCTGAAAGCTGCACCTGAAGCTGTGGTAAA CAACAAAATTCCATATTTTAGTTTGcggaataaaaaaaaatgtatttctc TAGTGGGAAAACTAAATATAATTTTGCACTTTCTTTTCAGAGGACCATGG TGATGGCAATCCATTTGACGGCCCCGGTGGTACGGTGGGCCATGCTGACG TCTCCAACCGAAACGTACATCTTGACGAAGAGGAAAACTGGGGTGCAAAA CCTGAAGATATTTTCTTGTGGTTACATCCTAGTAAAGGAACAGACTTCAT TCAAGCTGCCATTCATGAAATCGGTCATGTTCTTGGTTTATCGCACGATA AAGACTCCGACTCGGTGATGTTCCCAACACTACAACAATTCCAACCACTA TCATATTACAGCTTATCGACAAGTGACATGAACAGAATTAAATCGTCGTT TGGTAAGTTCCATGAAATTTATCATTTATCATTGCGAAAAATAGGCCTTC TTCTCTATAACTCAAAATTGTGTTGCCCGAAACTGTTGTACaatattttt gagttcttttgcCCTGGTTGACACAAATTGCAGAGACTTCACCAATGAAT CGATACAAATAACATCTGTTTTCCCTTGGTGACGCGATTGTTTAAAGAAC AAGACACTGTAGACATACAcgttctttttttatataagaacaaactgtat aaggccaaaatgttaagaacaagttaagaacattttaaggctttgcagac tctaaaacacccgatttcttagggaaatgggcaaaaatggtcacaaaaac GTGTATACCGATATTATAAAGGTCATAAGCTAACTTAAGTCAGAAAAAAT GTTACAAATCACTTTTCAAGGGATAGATTAATTTCCTGGATTTCAACAAA CaaagattgtgtttgttttcacaaaaaagGATTAAGATATCCTGTGTTCA TTTTGCGAAGTTTCTGATTACAAACATTGTCAAAGGGTTACTATTAGTGC TGTGTGTATACTTCTTTAAACACATTCAACTGTTTGACCTAATTGAATAT TATACTATCGCTCTACACATTGGGCGGAAAGTTTTTCCTAAGCCATTAGC CTCTTGTCTCGGAGTCGCCTCATGTGACATACagggagaaaaaaaacaaa acaaaaaaccacTAGTTATTCGATTCTGAGTAGAAAACACTGTTGGTGGG TTTTTGTTTACAAGGGGGTTgtcgaaaggaaaaaaaaaacttgatcacaa acaagaaaaagcttttttttcaattaccTCTATCGACACTTCAAAATTCA AAGTACAGACTGACACCACAAAGCGCCACCATTTCGATAGGTGAGAGAAG GGTCATCAGAGCTCGCATAGAAAAATCTTGCAATGTACACACTATGTACT TGAGAGATCCTTAAAATCAGATCAAGTTACTGTTATAAAACTGAACTATT CAAAGTCTGTCCCAAAACTATGTTATACGATCctaaattgaagaaaaata ccCTTTTTTACCTAATTAGAGAGGCCTCATAAGCGGACGTTCAAGTcaaa ttcacgcgttcacgcagtttttttgaaaatttttgtttatcaagcaagtg aaaaagcccattcacggattcacgcaaaccgctcgGGCCCCATAAGATAA CACACATATGAAACGACAAACGTGTAATAATACTCTCTTCAATGTTATAG GACGATGTGAGCCAGATGTGATAGACGCTATGTTTGTTAACAAATTTCTT GATGGAAAAACCTACATAATTAAAGGTCCCTTTATTTATCAAATGGATGA AAGAAAACGGGAAGTTGTTCAGTCATGGCCACGTGCAACCACTCTCCCCT TTTTGGCACCTACATTTGTTGACGAAGCTTTCTGGCATACTGATCATTTC CTATACTTTTTTAATGTAAGTAGTGTTGTGTTAAacagtaagttggtcta atatagATATCTCTCATGTAATTCCTATATACCCTTCTTAGACATAGGAT TAAAAGGAATATCGGAATCACtaattgaaaaaatgtttcaacgATCGGCG ATTCTGACCTTTTATTATTCCTCCCAGGTtcaaagaagggtgtcggaatt agatgagggatatcgacattagaccaacctaCGGTAcagtgtgtccggaa aaaagcGGAACAGATTCCTATATGGTAAAATCAAGTCGATGCACTGCACA AGTTCGGAAAATGGATCTCACGTGGGTCCTTCAAAGTGCTGTCTTTTTCA AATCTATGTTTTTGTATCCCTACCATGGACTGGCTGAAAAAGCCAGAGCA CATCACGTAGCTCCTTTTACTTAACCCCTGGGTTTTATCTCTAAATTGAA TCAAAATGGTAACTTTAAACGATAGATTCTTGCCATTATTCTTACCAGTT ACCTAGCTCTGATGTATTGATTAAAGAATTCGAAATCCAATAAATCCATA ACATCTATCATTTTTGTATTTACAGAAAGACGGTTATTACATTTACGATT CAACCAACGATCCCACAGTAAACCGCAGTCCTCTGTTCAATCTGAACAAG AACGGTTACGATGTAGGATTCCGTGGCCTAAAGCATCACAAATATATTGA TGCAGCTATGGTGATGGATTACAAAGACGACATAACCGGCAAAACAAAAC CTACTTCTTTCCTTTTTCAAGACGAATGGGTCTACAAATGGGACAAAGTC GAAACTAATTGGCAACGTAGCATCATCCCTGCCGAAAAAGTAGCCGACGG TTGGCCAAAATTAATTAGAAATGTATTCCCAGGGCTTCCAGGGCGTATTG ATACTGCTTTTACATGGAGTTATGATGGTAGAACATATTTCTTTGTTGGT AGATATTTTTATATTTGGGATCCGGTGAAAAATATTGCCGATGGACTTTA CCCAACTTATCAATGGCAGAATGTATGTGAGATATATCTTTGCCAAGTGG CGCCCACACCTAATGTCTACAATTGCGAGAGTTGGGACCTAACCATGGAT AATTGTCACGGTTATTGTCATAATTAAATAAACGTTTTAGATTGTTAGAT TGGGTTAGCGAACTGCCTAGTACAAAGCTAGGAATTACCAGATTTTAACT GTGGCTAAACGTCCAGATTAATCAAATTATCGGCAGAACTAAAAATTTGT AGATATATGTAAAGAATATTTTTCCctgtaaatttttatttgtacataac tcttttttttttgaaagtttaaataTTGTTTCCCAAAACATTTTGTTCTT GTTCCAAAATTTACCTTATTTATAATATGTGTTATAAGTATATCCTTATT GTAGAACCCCTAGATCACACACTGCACTGAAATCAGTGATACTTAGCAAA CTCGCCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015027TCONS_00015027Clytia hemisphaericatranscript
TCONS_00015028TCONS_00015028Clytia hemisphaericatranscript
TCONS_00015029TCONS_00015029Clytia hemisphaericatranscript
TCONS_00015030TCONS_00015030Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015027-proteinTCONS_00015027-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000203supercontigsc0000203:116553..122409 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.07 0.08 0.16 0 0 0.03 0.06 0.29 0.33 0.52 1.41 8.76 8.77 52.7 48.97 53.63 67.27 0.39 0.07 28.34 25.69 15.74 16.23 12.42 7.88 0.13 0.25 1.38 1.26