XLOC_008418 (gene) - C. hemisphaerica

Overview
NameXLOC_008418
Unique NameXLOC_008418
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000203:91074..96512-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008418 ID=XLOC_008418|Name=XLOC_008418|organism=Clytia hemisphaerica|type=gene|length=5439bp|location=Sequence derived from alignment at sc0000203:91074..96512- (Clytia hemisphaerica)
GTTAACTGAAGGATATAATTTTATGAAAAATGGCTTCAGAGACCTTGGCT
TCGACTGACGAAACTATAAATATTTTGGCCACAACAAACCAAGACCATTA
TGAAGCTGAAATTGCTATTAGAACTTTGAATAATTCAAAAACTGTTTCAT
TTCTGGTAAAAGACTACGAGCCTTCTGATATTTTATTTCCAACTCTGATG
CAAAGATATCTAACAGGAAGTCGAGCTGAATTTCTTTACACAGACGAATC
AGATTACGATTATCTCTATGAGATAGGTCCAGGAGTTGTCCGTGATTTTC
GTGGGAAGCGAAAAGATGATCCTTCAGGATATTTTTATTGGCAACCAACA
GAAAATCCTGGATTTTATACCATTGAAGACAAAAATGGCAAATATTTGTA
TTCGCAAATTATTCAACAGAAGTTAGCACCTTTGTTTTTGACGGGCCAAG
ATCTTCATAGCAAGAATCGATATGATTTTGAGGATACATCAAAATTGAGA
GCTGCTATCAGTTATTCCAACAAGGATTTTGTCATTGGTTTGCGTTTAGC
TGAATGGCCTAAAGAACTCATCCAAGGTTTTCCCATGAAAGAAAGTGTGG
AACAACTCCAGACGATTCCTTTGTTTTTGATCGCTAAAAGCTGTCCTGGA
AGCTCTCTTGCTAAGCTGGAATGGAGGATTTCATTTTCGCTGGTCGAGTT
AGAAATCCTAATCAATTTACCATATTACCAAAGGAAAGCTTTCCTTCATT
TAAAGCATCATCTAGAAAAGGTTGAGGAGATTCCATCATATTTTTTGAAA
ACAACATTGTTAACAGTATCTGCATATTTTCAGCAGGAGTATCCCCAGGA
AGAATGGAATACAAAAATATTTTATAAAGAATTAACTGATAACCTAGAAA
GGGCCATTCTTAAGAAAAACATACCTAACTTTTTTGTACCTGAACAAAAC
TTGTTTTTACTAGAGGAAGAAGATTTGAGTTATGGAACGAAAACGAAATC
TTGGAACGATATCTATGCTCAGATAATAAATTCAAAGTCGATTGACTTTG
GATTTCCTGTTGCTGGAAACAACATCTACTTGAATGATAATGAAGCTCTC
CTTGGTTGCCTGGCCGAAACATATATACAAATTATACGAATAGTTTCTCA
AATTGTTGATTGGAAAAACAGTGTTAAACTAATTTGTGACACACTTCCAC
TAACATTTACTAACCAGATTCGAGATCATTTTCAAAACTTGGTGCGAATC
AACCTTTATTTTGATGATACACATATAAGTGAAAATGAATTCGCAGCATA
TATTACAGATTTAACGGTGATGAATTTAGGAGATTGGGAACTGCATGACA
TATGCGCAATGTGTTGCGGGAAGGGTTACTTTTCCCATAATGGTCATGTT
GCCCAAACCACAAATCAAATCAATGAGAAATACAAAACTCTAATTAATTG
GATCGATCGAATTATTACTCGAATCAATGAAGACATTGCATTGGGAAAAA
TAAAAATTCATCTATACTCACAAAAGAAAGCAAAGGATCATTGAAAGAAC
TTTTGAAAACCCCTGGTGAAGCATTGAGAGACTTTCATATAAGTAAAAAT
ATAGGAAAATCATGCAAAGAACTGTTAAAAGTTTGTTATTTTGCGTTCAG
CCTGCTATTTATCATTATAGTAACTATCAATATTTTTTAAAGTTTATCAA
TGATTGACTTCAAAAATCATCAAAAAACAACAAAAAGAGCCCTTTTTAAA
GTCAACCAGGGCAAAGTTTTAAGCTGTATCTTTTGATTGAATGAATCTTT
TTTGAATCTTTTTTCGCATTTATGACGTTCTAAGATAGAAGAGTTTCTGA
TGCACAAATGAAGATTAAAGCATTATTCTACAAAAGTTCATTCTCTTCTT
CATTCTTCATCTTCGTTTTTCCATCCTTTAATTTTTTTCTTTTTTGATAA
TATGCCACTCTGGGTTATCTTTTTAACGAGCACAAAACAGGTTTGAAAAA
ACACTGCAAGCTAATTTGAAATAGACTTTATGTTCGAACAACAGAGGAAA
TATGATAAACTAGCAGTCAATCCCAGGCCGTCGTCACGGACGACTTGTCA
CTTATTCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNCAGCTTTTATAACAGTGACATGACCAAAA
CTGAAATTGGATTTTTCAAGATCCAAACTAACCCTAAACGAAATCAAGAA
TGGAAACGAATCATTTACCGGTATCGACGAAAGGGAGGAAAAGATAAGTT
CAAAATCACATCTACCTGATCTACAACAGTTATCTGTGAATTTCATTTTA
AAGCAGAGGACATTAAAGTCACCCTTGGAACACATAAAAAGGTTTTAAGG
AAAGGAGCAANGATTGGTTTACGTTTAGCTGAATGGCCTAAAGAACTCAT
CCAAGGTTTTCCCATGAAAGAAAGTGTGGAACAACTCCAGACGATTCCTT
TATTTTTGATCGCTAAAAGCTGTCCTGGAAGCTCTCTTGCTAAGCTGGAA
TGGAGGATTTCATTTTCACTGGTCGAGCTAGAAATCCTAATCAATTTACC
ATATCAAAGGAAAGCTTTCCTTCATTTAAAGCATCATCTAGAAAAGGTTG
AGGAGATTCCATCATATTTTTTGAAAACAACATTGTTAACAATATCTGCA
TATTTTCAGCAGGAGTATCCCCAGGAAGAATGGAATACAGAAATGTTTTA
TAAAGAATTAACTGATAACCTAGAAAGGGCCATTCTTAAGAAAAACATAC
CTAACTTTTTTCTACCTGAACAAAATTTGTTTTTACTAGAGGAAGAAGAT
TTGAGTTATGGAACGAAAACGAAATCTTGGGACGATATCTATGCTCAGAT
AATAAATTCAAAGTCGATTGACTTTAGATTTCCTGTTGCTGGAAACAACA
TCGACTTGAATGATAATGACGCTCTACTTGCTTGTTTGGCCGAAACATAT
CTACAAATTATACGAATAATTTCCCAAATTGTTGATTGGAAAAACAGTGT
TAAAGTAATTTGTGACACACTTCCACTAACATTTACTAACCAGATTCGAG
ATCATTTTCAAAACTTGGTCCGAATCAACCTCTATTTTGATGATACACAT
ATAAGTGAAAATGAATTTGCAGCATATATTACAGATTTAACGGTGATGAA
TTTAGGAGATTGGGAACAGTAAGACATATGCGCAATGTGTTGTGGGAAGG
GTTACTTTTCCCATAATGGTCATGTTGCCCAAACCACAAATCAAATCAAT
GAGAAATACAAAACTCTAATTAATTGGATCGATCGAATCATTACTCGAAT
CAATGAAGACATTGTGAAAAATAAAACTTCATCTATACTCACAAAAGAAA
GCAAAGGATCGTTGAAAAAACTTTTGAAAACCCCTGGTGAAGCGTTGAGA
GACTTTCATATAAGTAAAAATATAGGAAAAGCATGTAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015045TCONS_00015045Clytia hemisphaericatranscript
TCONS_00015044TCONS_00015044Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015045-proteinTCONS_00015045-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000203supercontigsc0000203:91074..96512 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.03	0	0.2	0	0	0	0	0.22	0.28	0.14	0.14	1.23	1.91	0	0	0.1	0.12	2.57	1.42	0.2	0.31	0.06	0.06	0.49	1.14	0	0	0	0