XLOC_008900 (gene) - C. hemisphaerica

Overview
NameXLOC_008900
Unique NameXLOC_008900
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000222:299740..309531-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008900 ID=XLOC_008900|Name=XLOC_008900|organism=Clytia hemisphaerica|type=gene|length=9792bp|location=Sequence derived from alignment at sc0000222:299740..309531- (Clytia hemisphaerica)
GAATGTACGTTACAGATATCTCAAGTATCTTGGTAGTTCCAGACAGAGAG
TTTATCAGCTTATTTTGAAGTAACAAACACATCGTTTCAATTACATTTGA
ACTTCTGGTTGCGTTTTTATTTGATCCTCTATTTTATTGAAAAATTCCCC
ATGTAAGAAAGTTGAATGTTGAGACCTACTTAAGGATTGCTTCCAAGGCG
CTGAAACCACTGATATATTGTCTGGACAAAGATTTCATTCACACAATTGA
CGATCAATTGTTTATAAAGCAAAAACAAACTTATTAAGTCTTAGACTGCA
AGAAAATTCAAGCATCTCGTACACAGCTCTACAAAAGTACAAGATGACAA
AATCGCCCTGATTTTACTGAACTGATATTTATTTCTATATAGTTAGGTGA
CAAAAAAATGGGCGAGGAAAAATTATTGAATGGCGGTGGTGTGCAGAGGG
TGGATAAAACGCGAATGGGCGTTGGTTCATGGCGTCCTGATTGGTTACAG
AAATTTAATTCGATGAAATGGTTTTTATTAGCATTATCACTGGCATCGTT
CGTTCAAGGTAAGATTAATGGATGAAATCTCTGGATTAAACTGTTGATTA
TTTTTTCTGTTTTATTCGCTATATAGGGTCTTAGAAATGATAAGCTTCCT
CTGTAGATTAAATTGAAAGTCACCGTCAAATTTTTTAAGAAACTCTCACA
AACGACGCTCTATAATTCGGAAACTCCCGTTCCTGAAATGAAGTAAATTA
TTCCGCTCTCTTATTCGAATTCTAGCGTATTAACAGTGACCGTCATTTTC
AGGGCCGTAAAGCATTATAGTTTGTGACTACAATACGGGTCAGAAGAAAT
GGAATTCCTCACATTTTGGTATGAATTCACAAGTTTACCCCCTTTACCCC
CCCCCCCTATACAATGTTGAATTTCAGTCCAACTTTGTCCAACATTGTAG
AGAAGGATAAGGGGGAGAGAAGCCATAAAAACAGTAGAATAAGTGGAATT
CCATTTACTTTTGTCCAGGATTGTAGTTTACATTTAGACTTAATTTACTT
CATCACTTCCCTGAAAATCTTTGGTGACACGAACTTTCTGTTCAACATTT
TCAAAAAATATATCATTTTCATTTGTTTCAGCCATCACTGTTGGTGGAAT
CACAGCAGTTAATTTGCAGACTTTGGAAACAGAGTTTGGATTGACAAGCA
AATCAACTGGTCTCATTATGACTGGTAATGATATATCTGGTTTACTTTTG
GTCACTGTTGTCAGTTTCTTTGGTACCAAAGCCAGTAAACCAAAATGGAT
GGGTATCGGGTCTGTTATCACAGGTAATATTTCATTTGTTTATTCGTAGC
TTGATTTCATATCTTATTTTGCAAAAGGCACCTGAAAATGAGCCTGAGAT
GTCGACACAATGTGCAAAACAAATCAAATTTGGTGCGAATCAAAACCATA
AATATACATCAGATTTTTACTGTCAGATTTGTAATTCAGCAGTCCCCGAC
ACACCCTTTCAGTGTATCCAGCTAAAAAAAGACCCTTGTAATGCACTCTA
TCAAAAGTAGACCCTTACAGTGCATTTCGGGGATCTCGAAAAACCTACCA
TTAAGGGTGGCACATACCGTAGGTCGGACCATACGAGTGCTCCCCCCCCC
CGGGGTTAAGACTCACCTGTTCCTACTTGTTCTAAGGTTTTGGTCAAATC
TTAGCCTTCTATAACTATAAGAGGCTCCCCCAACGTCAACTCTGATCCCA
ATTTTTTTTGTCACGATCACGCAAATCAGCTAAAACCTTGGATAATCACA
TATCTCTTTGAAAAAAGTCCAAATCACGATCAAGTTTTGAGCTCCAATCG
CCTCCAATCAAGCAATCACGGAAACTATTTTTCCAAATCACGTAATCACG
CAAGAAAAAGTCCCTATCACGCATGAAAACCGCTTGGGGGACCTCCTATC
AATTTATTTTTATCGATAAACGTGTTGTTAAAAATACACACACACAAATT
TGCATGGCGTCTTGTGTGTTTATACAATCTTTAGCGCCTTAGCCCAGCCA
AAAGATGTAAGAAAACACTCAATAAAAACATTAGATTAATGTTGAAAAAA
ACTCCTGTACAATGTGCTTGGTTGAAATAGGTTAGTATTCATCATTGATC
TCTTCCTCTCTCTATAAAGGACTTGGAATCGCATTATTTGCTTTGCCCAA
ACTAATGATTGGCAAGTACGAAGGGGCGAGTAACCAAGAAGGATTTGACC
CGACCTGTCAAGCATCTGCTGGTCCCCAAGGTGATCTACAATGCAATGAA
AATGGTGGAGGAACGATTGGACATATGGCTGTGTTCATGATCTCTCAGTT
ATTGATGGGTATTGGAACAACACCACTGTATACACTAGGTAATTCTTTTA
TGTTTAAATCTTTCGTTATATTTCACTTATCACACTTACAATAAATCCTT
TGTTCACTGTCGTAGTACAATATTAGTCGCTGTAGAATAGTTGATAGGCT
TTGATTACTCTATTGTAGGGCGAGCTCACTTTTAAATTTTTCGAAAAATA
TCACCCCGCGCCAATAGAATTTTATAATGACCCCTCCCCCCCCCCCCNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCATTTTATGAA
ATCTTCCTGAAAAAGTGCCAAAAACCTTTTTCCTAGAGGTTTTGGGAAAA
TCACCCCAGAGTCACTTAATATCGACCCCCCCCCATTTTATGGATTTTCT
CCCAGATTACCAACCCCCTGCTTATCTCCCCCTACAATTAAGCACAGAAA
AGTAGTGTAAAAATGTACTTGAGGCGGCAAACCGAATTTTTAGACAGGCA
CATTGTATTTTTTTTCGTCCCTTGGGCTAGACTAGCAAGCATCAGTCTTG
GACACAGGTCTAATCTAGTACTAGTCTATCCTTGGAGCAGCAAAATTCGC
CATTCACCGGGCCAAAAAAAGACTATTGTGAACTGTTCGCTATTGAGCCA
CATTCAAAGCAAGGTGGTTTTGGTCAATTAAGAGTCTTTAGATAATAATG
ATAAAAATTACTTAAGCAAAGCATTTGAAAAGGAAAGTATGAAACAAATA
GGCCACATTCCATTTCATATCCATACAGATGGGTGGACGAACATTTCCAG
GAAGTAATTCTAATAGAATTTCTAGGGAATTTAAAAGAGTGTTTTTAATT
TTTCAAGGGAGTAAAAAATTATTTCAACATTTCCAGGGGAAAATATGATT
TTAGTTCGTCCACCGATACTTAAGGTATTGAAAGAAAATTTTCCAAGGTT
TTTCTCATGCAAAGGGGAATCTACATATTCCCAAGAATTTTTTTTAGCTT
GAAAAAGTTCGTCCACCCCTTGTATGGAAATTTAATTTATATCTTTTTTA
CTAAGGTCCAACATATTTGGATGAGAACGTGTCACCACGTGCTGCCCCGG
TGTATCTTGGGATATGGTTTTGTTGTACAATGCTTGGACCTCCTATCGGT
ATGATCATTGGTGGAATGTTCTTGCGTATTCATACTGATATGGAAGCTGT
AAGTACCCAGTAGTTTGAATCGCATACCTCTATAGATATACTTCCTAGAA
ACCTTTTTCGCTAGAGGATGAGCAGAAGCCTAACAGAGCTATAAAAAGTA
GTCTGAATCGCAGACCTCTATAGATATACTTCCTATAAACTTTTTTCGCT
AGAGGATGAGCAGAAGCCTATAAGTACAGTTGACTGTTGCTAATTCGAGC
TGGCTCGGAAATCTTATTTGTTCGGATCACAGAGAGGTTACAATTAATTG
AAAGTATATCAAGAAGAAATTCTTCTTGACAGGGTCTTGGAATAAGTTCG
AATTATAGAAAGATTAGAATATAGTAGAAGTTCGAATAAGCGAGAGTCTA
TTGTATTCATTCATTCGTAATACAGTGGACTTTCGCTAATTTCAATCTTC
TTTTATTCGAAGATTTCTATACCTAATTCGAACTAATTCTCAGCATTTAA
CGTTAAGGGGGAACCTAGACGATGTTCTCGTCCATTACAGTGATCCCAGC
TGGCACACAACGTTGTTTCAACGTTCACCTAACGTTAAATGGACAGTAAT
GTGAAAGTAAGATAAACGTTGAAACAACGTTGTGCACCAGCTGGGATAGC
AATATCGGTAAAATATTATACGCGCTGAGTTTACAGTCGTTATTGGACAA
TATAGATTTTTTTTCTCTTAACAATTAGCGGGGGGAGTTTATTCGGGAGA
CAAGAGTACTAAATTGCATTTCGTTTTTCTTTCTATAGCCTGAAGGCGTT
GCAATCGGTGATCCAAGATGGGTTGGAGCATGGTGGTTAGGCTATGTAGC
GTTCTTTGGTATTTTCATCATAGCTGGATTCTTCTTATTCTTGTTTCCAA
AACGATTGAACAGTAAACAAGCCAAGAAACGAGAAAAATCCATAAAAATG
GGTCAACTCCCTGGTGAAGAGCAAATGAAGTTTACATTCAAAGGATATTT
GAAATCTATGTTTAGTTTATGTAAAAATCGAGTTTTTATGTTAATTGTAT
TTGGAACAACAGTTCGAATGTTGTATACGATTGGTATGTTTACCTTTTTG
ATCAAGATTTTGATTTTGAAATTTGGTGTGGCACCATCTAAAGCTGGACA
ATCACTGGGATTTATCATGATGCCAAGTTTGATTGGTTAGTATATTAATT
GATGAGATTTTCTTTGGAGACTTGGTTTGAAATTAACAGTAGCAGAATAA
CTTTTTTTAAGGTCTTATATTTTCTCTTCAATTTTTTTTTTACAATTTTC
GCAAGTGACCACTCCTAAATTACACGCTTTTTTATAAGAATACACTTTAT
AAGAATGTCCATGATGAAAATGACCAAAAAAATGCCATCATGCAATTAGG
CAACTGAAGCTAAGAATGTCAGTTCTATAGCCTTTTACCTGTATATTGGC
ATTTACTTCCAAGCAATGCTAAGAAGTTTCACAAAAATCTGAAATTCTTG
CTTGATGTATATATTGCATGCTAGATTTAGGCTTGGTTTTCATCTTAATT
TAAGAATACTGTAAGAATATTGCAGGATGATTTCGACCAAAAAGCTAAGA
ATATCCATGATGAAATGGATTTACACCACTCATTCTTATCAAAAAAGCGT
GTAGTGGGGTTGTTATAAGGTTATGACACTCAAAAAGCTACTTCCCTAAC
AAACCTAAACCATGGAAAAAGACAAAGCCCTGCTCAAGAAAAACATTTTA
AAAAAAACAACATTTTCTCCTTTTTCAGTCGGTGTTATGCTTGGAGCAGT
CATTTTACGCCGAGCAAAGATAGAAATTGCAGCCCAAACAGCCGCTAAGA
TTTGTGTGATAGTTAGTGTGATTACAATTGGAAGTTCCTTTGCTTTTCTC
ATTCCTGGATGTAGAAATACTAACATTGCTGGTATCATGGAACCATATCA
TAACCAGTATGTCATCTTTTGGTCATTTTGAAAATTATTTCTAATCATTC
ACAAGGTGGGTGTCACAGACCCGCTGGGACCCCAGCCTCGCTGGAAAATT
TGGCAAAGATTTCGTCCCCGGTGGGAAAATACCCTGGAACTTTAGCCCCA
CTGGGAAATTGACTTTGATTTCATCCCCATATTCGAAATTCAATATTTAA
AAATTGCACTTCAAAACCATCGCCACTGGAATTTTTAACTTTGGAAAAAT
AAAATTTCTATCCCCATCTGGATTTCAATAGGGATTTTTATCCCCACTGA
AGAAAAAGGTTCCACCAGGGCTGTGAGACAGGAGTGTAAAAAGGCTTAAG
TCTAATTGAAATCTAAGAATTGAAGAAAAAGAGCTAAAGTAATTCTGCAA
GTCAATTTGTGACCACAACGTATTTGAAGGCTCTTCTCTCATTAGCCATC
CAAAATTAGGTAACCCAGCTGGCACACAACCTTGTTTCAACGTTCATCTA
ACGTTCACAGCCCCCATGTAACGCTAGGTGAACGTTGAAACAACGTTGTG
TGCTAGTTGGGAAGGGTTAGTGTCGATCTTTCTCCCTGGATAATCAACCA
CTCCTAAATTTAAACATTAAAAATCATATTGCATTATCTATTTTGACAGC
ACTGAAGTGATCTTACCACTTTGAATTTAAACATTAGAAATAATATTACA
TTCTCTTATCTTGACAGTACTGAAGTGACAGGATCAATTGCTAGTCAATG
TAATTCGGATTGTCATTGTAAGAAATCCTTGTACCTTCCGATCTGTGGAT
CTGATGGAAGAACGTACCACTCACCATGTCATGCTGGTTGTACTAAGACA
ATCGTGCAGATGGATAAAGATGGGAAAATAGTAAGCAGTTTAACTGGCCT
CAACTCTAGGAACATGGGAGCAATGACCGCTTTGTATTAGGCCAACAATA
AAGGGAAGTCAAGTTCATAAACAACGGAGCTGGCTAGCCGTTAGTCTGTC
ATAGACCCGTTATCTACGACTAATTTCAAAATTCATTGCTGTAGAGGGTC
TGTTGTTGTCGTCTTTTTCTGATTTGAGATGTTTATGAAGTCACTAAATT
GTCAAAACTCGATTCTTGAAATTCTTACAAAAAAAACTAAACAATCGTCC
ATTAAGGTACGAAATCCTTATTTTCTTTCTCTCACACTAGGCATTAGTAT
TTGGTAACTGTGGTTGTTTCCCTGGCAATCATACTAAGAGCCTAAACATC
CCAGGAGTCATGCAACCACCACCAGGAGGTAGACCAGGAGGATTACCGAG
TAGTAATTCCACAACTGTAGCCAATCAACAAGGATTTGATATGAGTAAAT
TAAAGTCGATGTCACGTGAACAAAAAATGGCTTTATTCAAGCAGATGGGC
ATAATGAGAAAGGCATTCTNATATGAGTAAATTAAAATCGATGTCACGTG
AACAAAAAATGGCTTTATTCAAGCAGATGGGCATAATGAGAAAGGCATTC
TTCAATGAAGCAACTGTCGGCAAATGTGATCGTGATTGTAAAAATTTCAT
TCTTTTTATCATATGTACGCTGTTTTTTGTGATGATCGCTTTTGTGGCAA
GTACACCAAATAAAATTATGGTTTTGAGGTTAGTATATTGCTTAGGGAAT
CGTAATATTTATTTCTGTACTAAAGTTACTAAGGTTTATGCTGTCGAGGT
CGACCTCGAGGTACACTTTTCAGAAAAAAATCAATTCGCCAAATTCAATG
GCGGCATCAACGTATTTGACGTCAATGCACCTTTTGGATTTAGATTCCTT
AACAAGTACCTGTTTTAGATATGTACAATCATGGAAAAAATATTTGAGAT
AAAAAGGGATTTCCCTGCGACATTTTAAACACCACAAATGATCTTTAAGC
GCGTTAAACTACAGTTGGGAAGCTGAGTTTTAACATGAGACTTAAGACTT
AACACCTTAGGATCTCAAGAGTTAAAAGCTCAAATTTGCTCCAATAATGC
TTCGAATAGAGCCTAGAAACCAGCGAACCCCTCCAAAATCGAAATATTCC
ATGAAAGAAAGTTGAAGTGCTAAAATAGCAATTCTCGCCCGAACTTTGAA
TTCTGAAAAACTGAAGAAAAAAATATATCTCAATATATTTCGATCAAGAT
TGTAGCCTCCTAGTTTAAGTCTAACATTAAATTGAATCCACATACTTGTT
ATCAAATTTTTCTTTGAATTCTCCAATTTCCAACAGATCTGTACCAGACA
ACCAAAGATCATTTGCGTTGGGTACTCAATTTGTTATCATGCGTGGATTG
AGCTTCTTACCTGGTCCTATCATTGTTGGAGGTATCGTAGATTCAAATTG
TATTTCATGGGGCTATGATAAATGTGGAAAAAAAACAAATTGTTTAGATT
ATGATATTGATGCAATGTCATGGACGCTCGTATGGCTTGGATTTATAACC
TCAGGTGAGAAAGAGTTTAAAATTTCTGAAATAAAACTTTATCTGTGCGA
CCTAGGATGAGATATGAAGCAGACAGTTGTCTGATTTATTAAGCTTACCC
AAAAATTGCACTTTTTATTGTGTCTTTAAAACATTGCCTTGGCACAAAGT
TACTCTTATAGCTGGATATTCATGATATTCATGACGTAATGTTTTCTACG
GAAATACCCGGTTTTAGCCAGTAGTGGCAGATTTGAACTATACAAAAGTT
GCATAAAATTTGCCACTACTGCCAAAAGCCGGGGCCTTTCCGTAGGAAAC
ATTACGTCATGAATATCATGAATTGAATGAAGAAACTTAGATTGTACTCC
CCTGTCTCACAGCCTCAGCTGGGATAAAAATTCCTATTGAAACCCCAATA
CTGGGGTCCCAGCGGGTCTGTGACACAGCTGTGTGATTCTAGACCAGAAT
AGCTTTAGAAAAAGTTGGGAGATGGTCTTTATTTTTCCATAAATCTGGAA
ATCGCGACAACATCGCCTCATTCCCTCATGACAGACATTTAAAAAGAAAC
TTTCAAACCTTTTTAATCCAAATTCCATCTTCTTTTTCTCCAGCGGTAGG
AACAGTTTTGTACTTCTTAGCTTGGTGGTGGTATCCAGTGACAAGTGAAA
AAGTCTCCATGAACGCGCTCATTAAGGAAGACGGGGGTGTGGTTGACGAA
GAAGAAGCTGACGAAAATGAAAATGTGTAAAACATGAACATTGAATAGTG
ACAAACCTTATAAATAAATTCGTCATCGAGGGATTTTTTCGTCACTTTTT
GACTGACGAAATTTTTACTGCTACGGTATTCTTTTCTGTATACCATGGAA
ACACTTGGAGAATACGTGGTAGAAAATGTAGTGAGTTCTAAAAAAAGCAG
ACTTTTTTGAGCGAAATTTTATATAAAGTAAATTATACTGTTTAATATTT
CAATCTCAAAAACCTATTCAATCATCTTGGGAATCGAATATCCATTGATT
GAACAGAGAATTTCAATCTCACTTCAACTTATTCTAAGCCAAGATTATGA
ATATGAGTACGATTTTACTGTATATATAAAAATTTGTCCGCTTTTTTCTG
GACACACTGTATTGGAGCAGTGAATAATTAACTACATACAAATTAAAACC
GACGATATACTTGTAAATAATAGCGAGTTTTTTTAGCGACACAGGACGGC
TACGGACGGTTGGGCTTTCTTTAGATCCTGACTGGCTGCAAAATAACTGT
AAATCAGGACTATCACTATCCTCGATTTCGCAGGTGAATTTTCGGGTCCA
CCGGGAATAAAAAAGGACATAAATTTGTTAATTACGAGGTGATCGCAAAA
TATTGAAGTTTCCTGAATTGTACTATATTTAAATTTAAATATATGATAAA
AGCAAGACTCCCTTACCTTAACTACGAATGAAAAGTTCATCTTCTTGGTA
ATCATTTCTTGCAGCTGTTAGATAGTTGTTCAGGTAAGTACTCGTTTTAA
TGTTTTAGATGTTTTATATTTTTCCACTAGACATGTATATTTTGCTATGT
TTTTTTATATGTTTTCTATTGTAAAAAAGTTTTTTGTATATGTTTTTGAT
ATGAGAAAATATCAAGTAATGATTCAAAACGAATGTTATCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015937TCONS_00015937Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015937-proteinTCONS_00015937-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000222supercontigsc0000222:299740..309531 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.17	0.16	0.17	0.23	1.95	1.07	8.15	8.28	18.4	12.62	39.38	15.96	24.61	25.04	8.18	24.22	11.14	11.06	13.74	13.12	26.53	26.06	9.51	12.24	18.51	14.46	20.57	15.11	2.64	2.29