XLOC_009200 (gene) - C. hemisphaerica

Overview
NameXLOC_009200
Unique NameXLOC_009200
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000240:186280..193295+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009200 ID=XLOC_009200|Name=XLOC_009200|organism=Clytia hemisphaerica|type=gene|length=7016bp|location=Sequence derived from alignment at sc0000240:186280..193295+ (Clytia hemisphaerica)
TCTGTTTAGTTTAGCAAACAAGTCACGGTTGGTTGATTTTGCAGCGCCTT TCAACAAAAAGTTGGATTGGACGAAACGAGAACAAACGTGGTAATGCGCA TGATTTTTGGTGAAGACGACGTTGAACTGTCACCCTCTTCTTttgaaaga gaagaaaagaaaTTAATAAGAATAGTGAAATCGAAGAAGATGGAAATGGA ATAtttgatcaatttattggtCTTCATTTTTACGGTGAAGAATGTTTGGT GTGTAGGTGAAGAGACGAGTAGCGTGTACACGTCCATTGCTCACATGGAA CCTTTGTTAGACATTGAGGGACGTCTGGTCAAAATAGCTCGTGAATATTT ACAGAAAGAACGGCGAAGGCTTGGTGAATTCAAGCAGTTCGCCAAGAGTG TGGAAGATGCGATGGAGTTATCAAAAGACGAACCATTGAAGTACCTCGGC AATCCAATCAACTCCTATCTCATCATCAAACGATTTACGTCTGGTTGGAG AGAGTTAACTTCTAGATTGGAAATTGATGATTCCAAAGTTGATGGTATGA AAGCATCCTTTTACCTGATTCTTGTATActcggttttttataagaacatg ctaaatttttaaaaatgttctaaaaacgttcttagaatattattattttc accattttatgcGTATTTGTGTGTTAGAGTCCACGAAGCGCCTTATAATG TTCATAACTTGTTCatagcattttggccatcgaagtctcatgttcttata tagtttgttctaatcAAAAACGTGTATTGCTACTGTTTGttctcatgttc ttatatagtttgttcttatcaaaaacGTGTATTGCTACTGTTTGttctca tgttcttatatagtttgttcttatcaaaaacGTGTATTGCTACTGTTTGt tctcatgttcttatatagtttgttcttatcaaaaacGTGTATTGCTACTG TTTGttctcatgttcttatatagtttgttcttatcaaaaacGTGTATTGC TACTGTTTGttctcatgttcttatatagtttgttcttgtcaAAAACGTGT ATTGCTACTGTTTGttctcatgttcttatatagtttgttcttgtcaAAAA CGTGTATTGCTACTGTTTGttctcatgttcttatatagtttgttcttgtc aAAAACGTGTATTGCTACTGTTTGttctcatgttcttatatagtttgttc ttgtcaAAAACGTGTATTGCTACTGTTTGTTCTTGTTGCAATGTTTTGTT GGGTCATTTATGTAACTATAGCGTTGCATTTGCATCATATCATCTTTTTC CCTTTTCTctaaaatcaacttcttcaatattttttttcactttagaaATG AAGTCGATCATTGAGTCGAACAAATACCAGCTACCGACTTACGAAATCGA TCTTCTTGGAGCAACGGGTTCCATCATCAGATTGCAAGATACTTATGAAT TGACTGCACGGGAAATTTCAGATGGCAAAATCAAAGGTAACCTCGAAAGC TGTCCTGGTTTATTTTATCTGAAATGAAAGTTTAAATACAACTAGGTTAG ATGATAAATTTCATTAGATTTGGTTTTAAATTGTGGAAATCAATCATTGT GCTTCAGGGATTTCACGCTCAGCGCACCAAATGACAGCAGAAGACTGCAT TCACATCGCAGAGTATGCTCAACATCACAGACGTTATATTCGTATGGAAG AATGGGCCAAAGAAGCTGAGCGAATCTTTGATGACCCCTCACTCTCACAT CGCATTGGAAATGTTTCAAGACTTGCAGTTTATGAAATTCTTGGATGGAC AGCCTACTTGGTAATTTTAATGCACAGTGCTACccaaaagtttttctttg taGCTCTATACTTTACAACCCTCGGACAACAAATGATCAAAGCAACCTTT TTTCTTCGATAAATACATAATTTCTCAAATCATCTGTTTCCTTTCATTCT TTCATAGTCCAACGATTTACCGACTGCATTGAAATATACCAAACTTGTTT TGGAAATCGGTAAGTCACCGTTTCTTTGTTAACTGTACTAATTCATTCAT TGAGGTTAAAGCTCGAAAGGGATTGAATCGAATTTCTTGGATGTGAAATA AAGCCACATTTCATCCATTCAAAACATGAAATTTCACCGAATTCAGTAAA ATATTTTGGGAACCTTGCTTGAGAAGATTGAGTGCATAAAGTGCCAGCTC AATGGCTATGTAATGTTTAGATCATAAATTTTTTCATATGCTTTTTTTCG TCTTCAacttaaaattgttaaaaacaattatttgtaTTTGGTTTGCACTT CTTTTGGAAAGGAGCTTGTTGAACGTAGAAGTTTGTGATTGTTGAAACTT CTCTTTCAACAATTAGATCCCAAAAATGCAGATGCGTTAAAGAACGAAGA ATTTTATGATTTCTATGTGAGGGAGAACATTGAAAAATGGTTGACTGAGG AGCAATGGGATTACGCTGAAGCTCTCAAACATCTCAAACATTTTCGTGTG GGAACTCTTGTTCAAGCTTGCACGAAAAATAATAAACCAGTATGTACCCT CAACTTGGAAAcgcaaaacaaaaattgtttcaaaaagaaaagtttacCAA CATGCCTTACCAAAAGAAGTACAAATACAAAAAAGAACTATAtgctaaat tttaaaaactatcAATTCACAATTTGAGATATTTatgatgaatttaaaaa atcaattgCAGTTTCTGCAACACTCGATcgaaattttttcttcagaacCT AATAATGACCTTGCTCTAAAAAACGAGTACATTTACGCATGGCACGTAGA GAATAACGAGAAAAGCATTGAGGACGAGGCCACGTGGATGCAAATGGCAA AAATCATGCTGGAGAGTTACGGAGGGAAGGAATACGTCCAAGCATGTCGT AAAGTCAATCCCAAACCGGTCAGTTGTTGTTGGTAAACTTTTGCTGAACG AACATTCCTGTTTTGTGGGTTTCTTGGCTGAATTTACAGTCTTATggatt gaatgttttgattgagTAAAATATTGAGGAGTGGAACATGCTTCacaaga aaaacgaaaaaagaattattttagaATTTGTTTTTCTCAAGGTTTTCTGG ATCTTTATGAACATTTTTAGTAATAATAAACGCCTTATTTTTGTTTTAGG TCAAAATCAAGGACGCATCCaagttggtttgttttttgacCAAAGATTCA CCTTTGCTTTTGTTGAAACCGATTCGTACAACGAGAGTCCATGACAACCC TGAAGTCTTGATTTTCCATAATATCCTCTCTGATAAAGAAATGACCACAC TCAAAAAGTTGGCCACTCCATATGTAAGTTGTCCTCATTGTTACCCGCCA TATTAATTTTGATCAATGGGTCCCATAGTAAgtttgatttttgttggcga TCCGGATAACTCTTTCAGCTATAAAGTTGATGATACCATGATCACTCATT ACTATTAAGTACCTTTTTTTACTTACAGCTTCGACAAGCCAAAGTGGTAG AGGGAGACATCACAGAAGCAAACTACCGAATTGCCAAAACGTAAGCTTGT TTCGATCTCCAACTCTACGACCAAAACTACGACTATCCCTTTCTAtttta tacaaaaacaacaTATTCAAAACAGTCCATTTGTATGTCTATGAAGAACA CCTTCGTAAACCTTTTACGCCTAACTCCGCCCTTGCTATTAATCCCAATG ACTTTTCTCTCAGGATGTTTTTACAAGAGAACTTTCCAGGTGTGAAGAAA ATCAACACAAAATTGAACAGACGCTTCGAAGCAATGACCGGGCTGAACAC AGACACCGCTGAACAACTTCAGGTAATATGAATATCATTTGTACGTCGCa tatgttttccaaaaaaatcaaaatgttgaaaacGTATTTTAAGTTCATGT ACTTTGCATGCAATGATCAGATGGCTTTACTTTGAATTCTTCTTATCATT TTCCGATTATAGATCAACAATTACGGTCTGGGAGGACAGTACGAATTCCA TCATGATCATGGGGTAAGAAAGTCTTCTTTAACTCGTATCATACttgtga atgaatgaatgaatggatgaaagaatgaatgaatggTGAGAGTTGACCGG TTCTTCATTATAATATGGGTACAAACCATGTTACAATGACTTTTCCTTTC TCTTCATAAACTGAATCTCACCACACCACGCATCTCTTTCTCATAGACCC AACAGGATTTAGCCAGTTAGGGTAAAAATCACAGACTGATGATCGAGGAC TGATGATGGATGCTTCCTTGTTTTTGATGGCTATGTTGATTTAAATCCCG TTGATTTTTAATTAGCCTGAAAATTCAATGTGGACGggaaaatagcacaa tattttgtagTGATGATTCTTTTGCCTGATTATTTTCAACGTGGACAAAA ATGAGAGTATGATTGTCTAGTGAGGGCGATAGCTTCTTTCCAGTAGGATG GGGTCCACCGGGTTTATGAGAAGGGGTGTAGTTCTTTCTCTTAATGAGCt tgtttacttttgattttttaggaAGAAGGCTCATTACTGGCTAACCATCC AGATGGAAATCGTTTAGCTACGTTGTTGGTCTATGTAAGCCACCTTCATT TATATGCACTTCGTCCCAATCCAGTGTCCGTTCTATTCGTAAAAGTGTTT AAATAACTTGTTCGTCATCTTTCTTTCAGCTAACTGACGTGGAAAGAGGA GGTGAAACGGTATTTACAAGACTGGGTATTTCTGTCAGTCCAAACAAGGT CTGTTCAATTTCTACATTCAGTTTCCACTTTCATTTTCTACGTTCATTCT CTACCCTAACACGACACTTTTTATTGACCGCTTAGGAACATTTTGAATTA ACATTTGGAAATTATCACTATTTAATATAAGTCACACCAAATAAACGCGT AATTCAGCTTAGGGAGACAATTTAACAACAGATTTTACCTTTCAGGGAGA TGCGGTTTTTTGGTATAATTTGTTTCGTAATGGCCAAGGAATCGATGATA CGTTGCATGCTTCATGTCCTGTCATCTCTGGTTCAAAGTGGGGTGAGttt cctttttttcatttaatatTGGTTTTATTGTGGAAATTCTTGGGAAGGTT GTAGCGTAACGTAGTCCCTCTCGTATTAAGGTATTCGAAAAAATCCTTTT GACCCATTTAGATAATAataaagtctgttccaaaagaATTGGTAGTCCGA TTTCGGTAGGAAACTTTGAACTGCTACTTATTTTTGGCCGTTTGTAACCT GATTTTaaatagtctgaatcgcagaacTCTACAAAACCCGCTGGTTATAG TATAAAATATAAGACCGAAGCCGTGAGCCTAACTTTTAAAGGCTGTAACT TTGGATccagtttcattttcaaaaatccttttaggagagaccaatttaat ttgtttttctacgGGCGCGACCGACCCAGtatttgctgcaaacaaaaaat aataatatttttattcctGTGCCACAAATTTCCAATAATAAGTAgtcatt gaaaaaatttatgcttaaaaaaaaaagttgaaaaaagaatCTAGAATCAT GAAATCTATGCACGAAAGTTTTTATTACAAACTTcatcaaattgaaaata tgacTTAAAGCCTGATTACTTACCTTAattaatgaaaatcttatttttat tttaccgaccgaccgacttatattttgctaacgatctgcccgtagaacaa caaatttaattggtctcgccttatagCAATGAATCAAAATATGCGAACTg ccattttttttggaatagactCTCAGTAATGTATTCGTTCAATTCAAGTT AATCTAGCAATCTAATGCTCATGTTAACCGgtacaaaaaataaatgacCA TTTGGTATGggcatttttgaaaataagaactGAGTGCGGAATATGAATTG CGTATACGTGTACATTTCATgatgaaactgatttttgtctaTATATACAA AGCAGACCTGGTAAACGTGAGATGCATTCTGGTATAGAGAGCAGTATTAT AATTTTTGTCCatgtatttttgtttcagtggCCAACAAGTGGTTTCATAA CTTTGGAAACGAGTTCCGAAGAAAATGTTTACTACGTGAAGATATTTGAC CATCTTGAATGGAAAAGCAACAGGAGTATTAGTTTTTCATcgagtaattt ttttcttttttgaatttttaaattgtaCAAATGATATTTGATAAATAACC GTAACCATTGGAGGATAGATTCATCCTTTTTATACTTACAAGTTACAACC TTTTTTTAACAGAAAGATAAAGAGTTGTGGCTCACTGAAGTTTCACTCAT ATTACAAACATTGAATAcatcaacgatgtaaaaataatagataaccaact acctctagaaggcacttctcccaagagaacaaccattgttttcctattga aaatagcactctattaaaaagctctgtgtgcagtgcgtgttatgctttta gctagattttgacacactttttgacatccaatgaattgataaaaaatttg aattgttatttactgcaaattttgaaatttttttcaaaagataaaggtac caatctttagacaaattgactacggatcggcctgataccacttaatcttc atctggataaataaacgctcataaaatgctgttatctgaaaaatatatgt gtgatttgacaTGCGATATCTTacgtatgaaaagtgcatgaaggttgcct gatacaaaataaacagatgaatgtttatgtttatagaacaataatatcta attaaaaaattccttctgtgaggctgcctataggaaaatacactttttct aacccaaattttggaaaaatatacatcacgtgatcgattttgtccaatag aaggttgcaaatgaagcaagtttttatttaattgcacNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNtttttacgatgcaaaatgtcattaatattttta caaccgtaacacggatgttttttgagaatcaaggcaagttggttatctat tatttttacatcgttg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016472TCONS_00016472Clytia hemisphaericatranscript
TCONS_00016473TCONS_00016473Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016472-proteinTCONS_00016472-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000240supercontigsc0000240:186280..193295 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.99 1.61 2.71 3.23 8.26 7.96 22.9 23.41 11 5.2 17.23 17.19 15.01 10.47 10.81 18.21 23.02 20.58 2.18 2.24 15.07 17.45 9.67 10.36 10.31 13.32 8.46 7.4 5.65 4.53