XLOC_009448 (gene) - C. hemisphaerica

Overview
NameXLOC_009448
Unique NameXLOC_009448
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000253:184239..190768-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009448 ID=XLOC_009448|Name=XLOC_009448|organism=Clytia hemisphaerica|type=gene|length=6530bp|location=Sequence derived from alignment at sc0000253:184239..190768- (Clytia hemisphaerica)
TAGGTATGGAATATTCGGTGACATTTCTAACACTCTGGCTGTACATCAAA GAAATGATCAACACAGATCAACCAAAGCTATTCTACAGTCTAGTAGCTTC CTCGTACCTGATTGCAGCTGTTATCTTATCAGTCTTCATTGGACGGTGGG TCGACCGCACGCGTAAAGTACGTCAAATCTTCCTAATCTGCAACACCTTA GTTATCATCGGTAACATAATGTATGCTTTCCATTTCTCGCCTTGGTTCTT GGTTTTCGGCCGATTGGTGTCTGGTGCTGATGGGCCACTCAGGTCGGTGA TTTCTGGAGAAATTGCAAGATGTTATCCAGATTCAGAAGTCCTCAGTAAA TTCTCTTCGATGGGAATGGCATTTGCACTTGGTTTCATTGTTGGACCTGG AGTTAATTTCATGTTTACGACGGTCGATTTCAACATTGGTGCTTGGCACG TGACTTATGTGAACATTCCTGGTGTTTATATGGCACTGTTTTTCTTTATC ACTCAGGTAATTGTCATATTATAAAAAAGAATTCATCTACCTTACCAATA CCTTGGTATTGCAAATCTTTCTATCAACTATAAAAAAGCGAAAAATGAAG AAATAACCATTTTTTCCCAAAAATACTTTGTTCGAAATTGGACTCGTATT AGGATTTTAGTCTTAAAGTCTACTTTAATGTACTATAGATCCTGAATTAA AGTAGTTTTTATTTAATGATCACTGACTGTCTTTTTACAGATATGTGTTT TCTTCATGGTTCATGATCTCTCACGTGAGTACGACCTCAAAGCTGACGCC ATCCTTAAACCAATTTTACCAGGAGATATCAAACCACTACCAGTTACAAC AAGCTTTTTTTATGCTAAATCCAACGCTAATACCCAATCACAATCAGATC GGTTCACAAAATCAGTTCAGATTCCAGTCAAACCAAAAGAAACAACCATC AACTTTTACGATGACACTTTGATTGAAACATCACATGACAATCAACAAGA ACGACGTAACAAATTCAAAATGCAACGACTCGAAATGTCTGGTATGTTTA TAAGACCCTTTGCATTCCCAAAGTTAGCATCCAATCAAGTTGTTCCAGTA ATCACTGAAGATTCATCCCTAACATCCAGCTCCTCATCAAACTACAGCTC TACCTCCTCCTCATCATCGACATCCAGTGCTGAACAATCCAAAGCTGACC ATATCCTCTGTACCATCCTAACCAATGCAGATTCCCTCTTAATCCTCGCG CTCACCTTCATTCTCTGGTACTGGATGGTTGCATTTGATATGTGGTTGCC AATTATGGTGGTCGATGTTATGGAGATGAGCATTACAGAACTCAATGGCA TTGTCTTCGGTTTCGGTTGCATCTCAGCTGTTATTCTTGGTATAATGTCT TTAAAATCATTCTCTGATCGAATGTTGTACAATCTCTCAATCATATGTAT GATCTCTTTAGCTATAATGGAGCTCATCTTCATCTACATGCGATTCCAAC ATTCCCAAATGTATGTCAATATTGTCTTATGGATCATTTGGGGCACCTTA TTTGCCATTGTGGTTATTATGGATGAAGTATTCCTGGTTGGTGTTATGGC AAAGATGACCAGCTCTAAAGTACAAACATTCTCTGAGAGCCTTCGACTCT CAATGTCACGCTTCGGAGCTTTATTAGCTTTGCTGACATCAGCAGCTTTG TTTGAATGGATTGAATATGTATGTGGGGTTGGAGTTATTGTATCGTTACT GACTTTAGTAATTTTGATTAAACGGAGAAAATCATTGAGAGCTCCCGTGA TTTGTATTAAGTAAATTTTATAATAGTTATAACTTTTTTGCACTATTTTA ATTGTATAAATTGTATATAGATCAAGATAGCATATCTGCAATGTACATTT TTTTCTAGATAATAATATTTTTTATAAGAAACTCATTGAAAATGATACTC CTTAGTGGAATAGAAAAAAGTGGCAATAACAAATGGCACAATATAGAAAA ATTATAACATGTGAAATTTTATAATTATAAGCAAATGCCTAGAAAAAGAA AAAAATCAAATGAAACCTATAGCTTCTGTCATTTGAATGTCCATTGATTG GTCAGGCACCTTCTTTTGAGCTCTGCAAAGCACATATATTTTCAAAAAAA TTAAAGTAAATTTGTATCATTTTAAAGTATCTACTGTAATTATTTTCCAC AAAAGATAATCATTGAAAAAATAAGTTTTTTAAATAACATATAGAACAAG GCTGTCATGATTTAAGATTTTCATCAATAATTATTTGACATTGAGTTTCA AGCCGAAAGCTAGAGGAGAATCTTCAACCTATCAAACAAGAAAATATGAA GCCTTTAAAATTTGTGCTTCATTGAACCTGGCACTTTTTTGTTTTGGCGT TTTAAATTTTTTATATTTTCTGGTGGTAAATGTTGCTGTGTTTGTATGAA AACCACGCGGGCCACGCAACCTATGTAAGAAGTAAGTGAGCGTCGAATCC TTGATAGGGAGATTTGACTCTAGCATTTGGATTCACTTTATTTACATGAT TTACATTACATGATTTGATTGCTATTATATGGATCCAAGAAGAATAAAAC GAAGACTTTTGCAAAGAGGAGAATCTAAACTTTGGGGACCTTATTTTCGG CAGAGAAAAAACATTTTGAAAATACTTTTGCGTCAGAAGGTGTATATTCA ACCAAACTAAAAATAGATTTTCGGAAAATTTTTGTAAAAGCTTCTTTGTC TCAAAATCTTCAAAATACCGGCTTTCGACCAATTTTCTATGCCATTTTTT TTCGAAGAAAAGCATTTAATTTTCGAAGAAAAGCATTTAAATAATTTTTG ATACACCAATTCAGAAGATTTTTCCGAAAAATTTCAAATAGATCAATTCT TCGCAGACAGTTTAAAAAATTATCGAAAGAAAAAGGTTAATTACGCATTG AAATTCAGCACTTTTTGTAAAAGAGGGTAATATATAAGATTTTATTAACG TCTTTTTAAAGTTCATTATGTAATTTGTGTAATTAAATTCTTAATTACTT TTGACACAATAAATCACCAAACAATTTGTAAAGACAGTTTTTTGTTATAG GTGTCAAGGAAAACAAAAAAAAAGTTTTATCAACATATCCATTAACGAAT TTTTTTGACTATGGTCAGAGCCCTTAAGTCTGGTGTTGAAGTAATTTCCG AGCAGATTCTGATACCGATAAATATTTTCAAAGTAAAAGTCATGGCACAG TAAGAGAATCTGCCCAGGTTGACACACAGCATTGATTTTTCTCATCTTAA TTTGAAATGAAAATTAAATGAGCTTTTAAGCGTGGTGATTGGCTAAAGCC CCAACATCAAAAGCCTATCACAAATATAAACATTAGAAACCAGTCGCTTT CATTTTCTTCTTCAAACAAAAATAAGCAAAGTGGTTTTTATTGTTTGTGT GGTAATTTTTTGACACGCGTGAAAACTAAGAAGGAAAAGCTAAATGGTCA GGCCCTAATTTTTCCTAAAGTTCGACCAGGTAGCTTTCGCATGATCTATA TATGAATATATAGAAAGGCCAAGACACAAGAAACTGACAAGATTGATCTC TATTTTGAGATACAAAATTAAGTATATTTTAGTATAGAGTAAATGGTTTT AGAAAATCACAAATTTAACCAAATACTGATAACTGATGAACTGATGTCCA TTTCCCAACAATCATTAATAAGTTTTTTTGTGAAAAACCTCTACATGTTA TTTAAATGATAATCCAACACCATATAAAAAGTTCAGAATATTCCAACAAA GATACTTTCGACGTTAACTAAATCTTCTCCAAAGACGGTAAAAACAAGGA TGTTAAACTCGTGCTTCTCGGCGACTCTTGGTGTTTGTTGTTTTCGTATG TGTCTCCTTCTCTTCTCTTCTCTTTTCCTCTCTAGGTCATATTTTTGGGT GATTTTATACCATTTGTCGGATAGGCAATTTCGTAAGTTATGGTCGTTAG GACCAGGACGGAAATCATTTTGTGTGTTATGTTATGTCGTTCTGGGGCCT AGCGGAAGTGTCGTTAGCCCCAAATGGACCTCCTACGTTTAGCAGTTAAT GTTAATTAATTGAAATTAATTGAAATTAATTGAAATTAATAAAATGAAAA CGCTGAATCACATATTTCTTAACAATAAAAGTCCGTTGATCTTAGTCAAA CCAGTTTGACAAGTCTGTCTGCCGTACCTCCGGATATCCTTATAAGGTGT TAAGAACGTGTGTAGACACCTATAAAAAGTGCAAGGTCTGTTCGTTAGAT TCAATATCAATCTTTCATGTGCTTTCATTTGAAACATTTATGACATGAAA ACTCATATATAGCTGGAAATTCTCCATTTAAAATTTGAAAATCGATACTG GATACTGAATACTAGATACGTAGCTTTAATCTTACCAACAAAATGTACAA AAACCTAGATAAAGAAGCAGGGAGTGACGAGCCTGTAGACATCAAGCAAT GGGAACGCAAACGTTATTGGACAACCAAAGCTTTCACATTGGAGTGTATC ATGCTAGGTATGTTTTGAATCATAAAATACTGATTCGAATCCAGTTACTT TGTTTTTCCTTACTCTGATAGCAATCCTTTTCAATGACGTTCATCAGTCA ATATTAACCATCCCGAACAGTTTTTGAACAAATCAATTCTTCTTTTTTGT AGGTATGGAATATTCGGTGACATTTCTCACACTCTGGCTGTACATCAAGG AAATGATCAACACAGATCAGCCAAAGCTATTCTACAGCTTAGTAGCTTCC TCGTACCTGATTGCAGCTGTTATCTTATCAGTCTTCATCGGACGGTGGGT CGACCGCACGCGTAAAGTACGTCAAATCTTCCTGATCTGCAACACCTTAG TTATCATCGGTAACATAATGTATGCTTTCCATTTCTCGCCTTGGTTCTTG GTTTTCGGCCGATTGGTGTCTGGCGCTGATGGGCCACTCAGGTCGGTGAT TTCTGGAGAGATTGCAAGATGTTATCCAGATTCAGAAGTCCTCAGTAGAT TTTCTTCCATGGGAATGGCATTTGCACTTGGTTTCATTGTTGGACCTGGA GTTAATTTCATGTTTACGACGGTCGATTTCAACATTGGTGCTTGGCACGT AACTTATGTGAACATTCCTGGTGTTTATATGGCTTTGTTTTTCTTTATCA CTCAGGTAATTGTCACATTATATAAAAGAATTCATCCACCTTACCATTAC CTCGCTATTCCAATATTTTTATTCGATTATAATAAAGCAAAAAATGAAGT AGGGCTATAACCATTTTTTCCCAAAAATACTTTGTTAGAAAATGGACTCA TATTGGGATTTTAGACTTTTAAGTCTGCTTTAATGTACTATAGATCTTAA ATTAAAGTAGTTGTTATTTAATGATCGCTGAATTTCTTTTTACAGATATG CGTCTTCTTCATGGTTCATGATCTCTCACGTGAGTACGACCTCAAAGCTG ACGCCATCCTTAAACCAATTTTACCAGGAGATATCAAACCACTACCAGTT ACAACAAGCTTTTTTTATGCTCCATCCAACGCTAATACCCAATCACAATC AGATCGGTTCACAAAATCAGTTCAAATTCCAGTCAAACCAAAAGAAACAA CCATCAACTTTTACGATGACACTTTGATTGAAACAGCACTTCGTACTCAA CAAGAACAAGAACGACGTAACAAATTCAAAATGCAGCGACTCGAAATGTC TGGTATGTTTATAAGACCCTTTGCATTCCCAAAATTAGCATCCAATCAAG TTGTTCCAGTAATCACTGAAGATTCATCCCTAACATCCAGCTCCTCGTCA AACTACAGCTCTATCTCCTCCTCATCATCAACATCCAGTGATGAACAATC CAAAGCTGACCATATCCTCTGTACCATCCTAACCAATGCAGATTCTCTCC TGATCCTCGCGCTCACCTTCATTCTCTGGTACTGGATGGTTGCATTTGAT ATGTGGTTGCCAATTATGGTGGTCGATGTTATGGAGATGAGCATTACAGA ACTCAATGGCATTGTCTTCGGTTTCGGTTGCATCTCAGCTGTTATTCTTG GTATAATGTCTTTAAAATCATTCTCTGATCGAATGTTGTACAATCTCTCA ATCATATGTATGATCTCTTTAGCTATAATGGAGCTCATCTTCATCTACAT GCGATTCCAACATTCCCAAATGTATGTCAATATTGTCTTATGGATCATTT GGGGCACCTTATTTGCCATTGTGGTTATTATGGATGAAGTATTCCTGGTT GGTGTTATGGCAAAGATGACCAGCTCTAAAGTACAAACATTCTCTGAGAG CCTTCGACTCTCAATGTCACGCTTCGGAGCTTTATTAGCTTTGCTGACAT CAGCAGCTTTGTTTGAATGGATTGAATATGTATGTGGGGTTGGAGTTATT GTATCGTTACTGACTTTAGTAATTTTGATTAAACGGAGAAAATCATTGAG AGCTCCCGTGATTTGTATTAAGTAAATTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016882TCONS_00016882Clytia hemisphaericatranscript
TCONS_00016881TCONS_00016881Clytia hemisphaericatranscript
TCONS_00016880TCONS_00016880Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016881-proteinTCONS_00016881-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000253supercontigsc0000253:184239..190768 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05 0 0 0 1.13 0.7 2.8 3.83 11.8 15.12 6.84 3.32 1.22 3.48 0.03 0 0 0.03 0 0 0 0.07 0 0.05 3.09 5.24 0 0 0 0