XLOC_009671 (gene) - C. hemisphaerica

Overview
NameXLOC_009671
Unique NameXLOC_009671
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000264:293447..297457+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009671 ID=XLOC_009671|Name=XLOC_009671|organism=Clytia hemisphaerica|type=gene|length=4011bp|location=Sequence derived from alignment at sc0000264:293447..297457+ (Clytia hemisphaerica)
ATTCGTGAAGCATTTATTGGCGGTACAGGATccatatttttcagcatttt cagtggatttttcatcgattgttgccattctttttcattcattcgCAAGA GCGAAGAGCGATTATGGTGATGCCAAAACTTGACATCGTTTGATCTCCAA AGTAATCATATTTTTGAAACCCAGAACTCCTTAAAAACCGCTGTTAACAT CCCAAAACTAGCCTAAAACAGttcttttcctttttgtgcTGTATTTCACC CGgtagattttcatgattttttgcacaacgaAGCAAAAGAGAAAACTTTG GTCACCAGTTTTGTTCAGGATTTTCTCAAATCTTATCCttactttttcct gattttttgttgatttttctgttgattagccaggtaggtccataaaagta tcacttgtttgttTGTTCATGAGGTGTGTTGTTTTGTATTTCACAGCACC TAGAACAGATATTATTTCTGTCATTTAAATTGTTATTTTCTACTGAATTA TCCTGTGAATTCGTTTTTAGAaaacaattcttaaaaaaaatgaccACCAC AGAAACCACTCAGAAGCCTACTGCTGCCTCATCTCAAAATCCAAAAGATG CTATTGAAAGAGTTGTTATCCACCCATTGGTGCTGCTTAGTGTTGTCGAT CATTTTAACAGAATGTCAAAAGTTGGTAACCAGCGCCGTGTAGCTGGTAT TCTTTTGGGGTCAATACGTAATAAAGTTTTGGATGTGGCAAATAGTTTTG CCAGTAAGTATGGTCTTTATAggatttctttttcattcaatttcaaTCAC TTTCAGAAAGTTTTTGGGCCACCAACAAAATTCTCAATCCATATANTCAA TTTCAATCACTTTCAGAAAGTTTTTGGGCCACCAACAAAATTCTCAATAC ATATTTCACATAGCCTCAGCCCCCGCTGGGGGGTTGGACTTAAAAATcag gggacctaatttttgcctgggacctaaacccagacTGACGCTATGTATCG TTGAACATAACACATCAGTCAGACGTTTGGTGTAAATACCATTTATTAAA TGTTATAGATTAGTTGAAGATGTTGAAATTCACTAACagattttttcctt ttcttagTACCATTTGATGAAGATGATAGAGATCCATCTGTATGGTATCT TGATCATGACTATTTGGATAACATGGCTGCTATGTTCAAAAAAGTTAATG GTGAGAACATAATGTTTTTTCAACTGGATCAAATCCAAACTAGATTTATC CAAACAAATTCAACTGCtagaaattttatttacaaTTGCCATAATACCTT ACCATATTGATACTTGCgatattttaaaataataacatccaagagataaa aagaaaggttaaGATAAGAACATGGTTTAGCCTTTAAGTACACATTTtct ttatattatatttatctTATCGATTCATTTAGCTAAAGAACGTGTCATCG GTTGGTACCATACTGGACCTAAACTTCATCCCAACGATATTCGTATCAAT GAGCTTGTCAGGAGATTCAATCCAAATTCAGTAAGGCTTActattaaaaa aagaaacaattttaaACTACCCTTTTGCGAATTTGAGGTCTCAGTTACAA ACtaatagcttgttttttaaaAGGATTGACCTTCTTCATTAACTGGGGGT TATGGAAAAAGAGGtaaagctctagtttagacggctgactttctgccctg cctattcaaATTGTCAGTAAGCAGAGAATGGGCaaaaagttggcagttaa aatttTACTTGAATAAGATTGAaggaagtcattgcattgacatcaaaaga gggcaatacattgactttagacagcccactttatgcctacttttaaattc aaaattagaatagacagggcgaaaagtgggccgtctaaactagagctaac aAATTTTATGATTATATTATATGGAAGTGATTACTGTGTTTATAACGATT CTTAAAAAATTGAGGTACTCGCTTgtattttcaatcatttttgttaATGT TTAGGTTCTGGTCATCATCGATGCTAAACCCAAAGAACTAGGACTTCCAA CTGAAGCATACATTGCTATTGAAGAAGTGCACGATGTAAGTGGATCCTTT CTTTCGTTTTCGTGTTCTTTTTCTCGTAATCTAAGTGCCTCTTATTCCTT CTACATTAGATGAACAGTTGTTCTCTGTTATTAATATTATAACTTCACTA TAAATTCCATTATTCGTTAACCTTCCACAATTTGATATGGAGCTTCTTCT ATGGGTGCTCTCAAATGGTGTATAGGTCATGGCACCTCTAGTTCCCTTTT CTGCGTATACAGTCCACGATCAGTGTAATCGGACCAAACTTCGATTAAAT ATTAGCCCTGTTTTGTATGATCTCGAAAATATAACAATGTCAGGATTTAG GAAATTCATTGCTAGACGATAACGACCTGCCATAACCACCAGCAGTAGTA CTGACTATTAGTTATCTTCTTTTCTTCACAACAGGACGGTACGCCAACAT CGAAAACGTTCGAACACATTCCGAGTGAAATCGGTGCCGAAGAAGCTGAA GAAGTCGGTGTTGAACATCTCCTCAGGTAACGatactattcaaattttta aaactcaattttaTATGTCATATTTTCTTGGCTTGGTATCGAGCACTATG GTGGCTTTGGTTTTTCTAGGGTTTACTGTAAGGGTTACTGTAGTAGGACA AgtaaaaaacttgagattctcgAAATTATCTctttttatgtttgtttttt tcctcAGGGACATTCGAAACGTTACAGTGGGTACCCTCTCACAGCGTATC ACTAACCAAGTGTCGTCACTTAAAGGACTACACGCTCACTTGCAAGACAT TCATACGTACTTAGAGCAAGTCATCAGCGGTAAACTACCTGTCAATCATA CCATCATGTACCATCTGCAAGATATTTTCAATCTGTTACCCAACCTCAAC GTTGAGGAATTCATTAAATCAATTACGGTGATGACCAACGATCAAATGGT AGTTATTTATTTAGCATCCGTCGTACGTACAGTCATTGCACTCCACAATC TCATTAATAACAAACTACAAAATAAGGACTTAGAACGGGAAAAAGAAGAA GGCAAGAAAGATAAAGATGCAACAAAGGCTGATAAGgatgagaaaaaaga taaaaaggaCTCCTCGAAAGATGACAAATCTACAACGGATAAGAAAGAAT CGACCACCAAGAAATAAATGTTGAGATGTTGTTATTTTTACTCATTAGGT TttgaattttgtgaaaaaagggATTTCAGTGACTTTTCCGAACTGGTATT GTTCATAGAATGTTATTCTCATATTACAACTGATatatttaaatcatgtt ttggAAATGGCTAATCCACGGTAATCTCTGGATAGACGATTCTTTATCGT AACAAAGTTACTGACAATTTAATATTAGTATACTAATCTGATATTCCAAC TCACCACTTCctcaaaatccaaattttagATATTCGGCCCCCAGATTTTC TTAttgatttcaaaacttttcgtTTTCAAATTCTACCAACAATGAAATGC CAAAAGATTTTGAAAGCACGTAAGAAGATATTGAACATCTCAGGATAAAC TGTTAAGGTTGGAGAGACATCTTGCCTtcgtttgttttttaaatcaaatg cAATATTTCCACAATTATTGTAACTTATTAACCAACGACCAATATCGGAT TGAAATGTTGAACTTCCActaatgttttgaaagtttttaactACAGGAAT TTTAAGCTTCTTCATTTTCCGTAGGAtatttttgttatgaatttCAACAT AgatcatttttttgaatttgcaaATATGTTATAAACTGTTTGTATATTTT CTGTGTTTGTTTTCTCCCCTTCTTCTTTGCTGTTTAGGGGTTTTTCTGGA CATTTTGAGGATTATTTGCATTGCCTGCCCAGTTATTATGCGTAAAATCC TGTCACTTATCAGcgcttatttttgttttgtcaaaAAGCCATCTTTTGAC CAATACGATGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017282TCONS_00017282Clytia hemisphaericatranscript
TCONS_00017283TCONS_00017283Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017282-proteinTCONS_00017282-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000264supercontigsc0000264:293447..297457 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PSMD726S proteasome non-ATPase regulatory subunit 7 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
157.11 162.21 114.46 109.24 157.01 125.1 130.68 143.66 89.86 93.27 66.86 58.85 54.3 52.24 83.33 93.69 106.18 94.01 36.81 45.12 65.96 63.94 89.59 79.64 115.48 112.11 65.5 50.73 62.04 58.13