XLOC_009693 (gene) - C. hemisphaerica

Overview
NameXLOC_009693
Unique NameXLOC_009693
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000264:360182..363992-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009693 ID=XLOC_009693|Name=XLOC_009693|organism=Clytia hemisphaerica|type=gene|length=3811bp|location=Sequence derived from alignment at sc0000264:360182..363992- (Clytia hemisphaerica)
TAAAAGTGATCAATTTTCTCCGAAGGGGAAAGGAAGCACTTCAGAAAAAA
ACCCATTGACAAAAAGATTGTTTTAATTAAATTTGCTAAAATGAAATCTT
TGTCTTCCTTTTTAGATGATCTTTATGGTACTGTTTTGTATGGTCACTTG
GTAAGTTTTTTCTTGTATTGAATTTTTGAATTTTTTATACTACAGAAAAT
TTCAATGTAAGTTTTGGTGTCTTTGCTGTTTTTTTCAAGTTAGCAAAGCA
ATTTGTTGAATGAGTTGAAAAAAAGCCCCCCCCCCTCACAACCTATTGGC
ACCGTCGCAAATGTCGACATAAATCTAGCTTTTGTCAACGTTGTTTCTGT
ATCAGTATTAATATTTTTAAAGTAAAACTTATCTCTTCAAATTTTAGGAC
TGCAGTTGGCTTGGATTGGGTTGGGTCTGGTTATTTGTTGTCAAACTATT
TTGTTGTACTGATTGGTATTTGGGCTGAATACGACAAAATCTCTCCTGTT
CCTGTACAAATTGTATGATTCCTTTAAAATTCAATCACACTAAAATATTG
GTAATAACAGCCTTTTTAGTGGAAAAACACTGGAAAAAGTGCCCTTTTTG
GCCACCAACGGAGGACACTGCCTTGCCTTTATAAAATATGGCCTGTTTTA
TTGACAAGTCTTTCAAAAGATAAAACATTCACTTAGGTCACATTTTTAAA
ACAAGTTCGTCGATGACAACTACTAGTACTAATGATATCATTTGCATCTG
TTTAGTTTTTCTTTGGAATGCTTTTCACATTGCTAAACGATATTATCAAT
ATTGGAGTACGATTTGAAGGAAGTAAAAATGGTGCCAAGGCTGGTAAATA
TATTTTGAATTAAAGTCATATGTCAAAGTTTGTTTATTTTGCTATTAGGC
AAATTTGAGTAGCTGTCTACCTGAAGGTAGGGACGTCTCATTATCCTGGA
TCTCTCCATTTACCCTTGAACCTATTTAATTTACCATACCTTTTGATAAA
TTTTCAGGTATAGGGGCACTATTGCTGAATGCTCTATCTGTGTGCTACGG
CAGCTTCAGTTTGATTTATATTATAATATTTGTTTTCTTACAGGTGGTGT
TTACAATACATTTAATTTCAACGCAACGTATCTTTTCACACATTATTTTG
TTCTCTATAATCTCATAGAAAACAGGCACTTTGTCCTATTTCTCAGGACA
AGGCAATGATGGAGTCAAATTACATATTCGTTTTATAAGTGGCTCCAATT
TTCGGGTCAGGTCTGAGGCAAATTAGATTACTTTGATCATCCCTGATATT
ATACCATACTTACGCTTATTGGTTCAAGGGCCGTTTGGATCGTTTGCCAT
GGTTAGAATATCTTATAAGCTTTCATTTTACGAGATAATGAAAAAAATTG
CTAATTTAAGGCCTCAAATCTTAGCATCCTAGCATCTTAGCATCCTTATA
ATGATATGAAAATAGATATGAATGTAGATATGAAAAATTATTGAAAAATG
CTATCATGATAACCTGACAATTAAAAAATTTTCTTAATTAATTTACAAAT
ATCTAGATGTTATATCCTTTTAATTTTGGTGAAACCAGTTGCTTCTTTAT
TTATTTACAAAGAATGGTCTTTCAGAGGTAAAATTATTTTTTTCTATGAA
ATTTCAAAAAAGAGTTAGATTTTTGTAAGCTAATGGCAATGTTAGTTTTT
TTTCTTAGATCTCTAAAGAATGATCTTTTTTGGGAAACCTTTCTCCCATA
TCACAACATGGATTACCACATTATGAAATAGTATAAATTATGTAATTTAT
AATTTTCTATTATCAATCTGCTCATTATTTTATTCATGAAAATACTTTTA
ATCTATCTTGCAGTCAACAGTGACGAAGGAGNTTATTTTGCTATTAGGCA
AATTTGAGTAGCTGTCTACCTGAAGGTAGGGACGTCTCATTATCCTGGAT
CTCTCCATTTACCCTTGAACCTATTTAATTTACCATACCTTTTGATAAAT
TTTCAGGTATAGGGGCACTATTGCTGAATGCTCTATCTGTGTGCTACGGC
AGCTTCAGTTTGATTTATATTATAATATTTGTTTTCTTACAGGTGGTGTT
TACAATACATTTAATTTCAACGCAACGTATCTTTTCACACATTATTTTGT
TCTCTATAATCTCATAGAAAACAGGCACTTTGTCCTATTTCTCAGGACAA
GGCAATGATGGAGTCAAATAACACATTCGTTTTATAAGTGGCTCCAATTT
TCGGGTCAGGTCTGAGGCAAATTAGATTACTTTGATCATCCCTGATATTA
TACCATACTTACGCTTATTGGGTCAAGGGCCGTTTGGATCGTTTGCCATG
GTTAGAATATCTTATAAGCTTTCATTTTACGAGATAATGAAAAAAATTGC
TAATTTAAGGCCTCAAATCTTAGCATCCTAGCATCTTAGCATCCTTATAA
TGATATGAAAATAGATATGAATGTAGATATGAAAAATTATTGAAAAATGC
TATCATGATAACCTGACAATTAAAAAATTTTCTTAATTAATTTACAAATA
TCTAGATGTTATATCCTTTTAATTTTGGTGAAACCAGTTGCTTCTTTATT
TATTTACAAAGAATGGTCTTTCAGAGGTAAAATCATTTTTTTCTATGAAA
TTTCAAAAAAGAGTTAGATTTTTGTAAGCTATGGCAATGTTAGTTTTTTT
TCTTAGATCTCTAAAGAATGATCTTTTTTGGGAAACCTTTCTCCCATATC
ACAACATGGATTACCACATTATGAAATAGTATAAATTATGTAATTTATAA
TTTTCTATTATCAATCTGCTCATTATTTTATTCATGAAAATACTTTTAAT
CTATCTTGCAGTCAACAGTGACGAAGGAGAAGGACAGGCTCCAAATGCAT
CTGCTTACGAACGTTTAGATCAAAACAATGGAGGCGGAGCATATGGCGGT
TATGGTGGAGCCAAGGATCAACCACCTCAATACCAGCCACCTCAGCAGCC
CTTTCCGTAAACCTCACGGTGTTTATGAACTGTCATGGATGCCTTTAGAA
TACTCACTATACCAAAACACTTCATTTTCTTAAAACTTTTTGATATTTGA
CAACGCTTTTGTAACCTCTGTTAATTGCACTATGTTAGTATTTTGTTCTT
GTAGCTAGATAGTTTTGGTACTAAGGACTATTTCCTAAGTTCCAGAGGTT
TAACAAATAGTTGGTCCTCCATCATGTTGTTGCGGGATATTCAAGAAGTT
AATTCAACAACACTTTAACCTAAAACCTTTCCAAGGCCATTTGTAAAATT
CTTTAAAAAGACTGGAATTGCCCTGAATCTTTCTTTGAATTTAGTTCCTT
TGTCTTTAACAGTTCAAAGGTTTTTTTAAGTTGTTAATGTGTAATCATTC
ATCTATGTTCTGTAATCATATATAATTGTTTTACTTTAAATTTGCACTAT
TTATGTTTTTTTTGTATTACTGTATGCATATTTTTTACCATGGCATTGTT
TTTGCTTCTCAAGGAATGGGAAGGACTTTACATTCTAGTTAAATTTTCAA
ATATTCAGCCACTAATTTCAGCCAAATTCTTTTTGATTTTGAGGTTCTTT
TTCTTCTGGAATTGACATTATTACAGCCCTGTGAATCCAGGTCGGCATTC
GGCAATGCCGACTTGAAAGCCCACGTAAGTTGAGCTGAAGTCGGCTTTTA
TTTGCCAACGTAATTTACACTCTAGGTCGGCGTGCCGACAAAAGAAATGT
TTTGGGTCGGCAAAGCTGACCTAAAGAGGAAAAATATTATTTGTTAGGTT
AATCTAATTNN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017321TCONS_00017321Clytia hemisphaericatranscript
TCONS_00017320TCONS_00017320Clytia hemisphaericatranscript
TCONS_00017319TCONS_00017319Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017321-proteinTCONS_00017321-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000264supercontigsc0000264:360182..363992 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
139.51	142.02	197.66	201.97	52.18	34.61	61	62.75	49.95	57.75	63.42	36.85	35.74	32.69	44.73	48.38	44.55	40.29	31.78	40.48	28.59	26.98	52.99	49.69	34.19	39.49	36.15	32.47	47.65	43.4